Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS05775

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,289,844	-				-0.8
1,289,844	-		DDA3937_RS05765	0.58	-0.1
1,289,844	-		DDA3937_RS05765	0.58	-1.8
1,289,854	+		DDA3937_RS05765	0.59	+0.5
1,289,888	+		DDA3937_RS05765	0.63	-0.6
1,289,889	-		DDA3937_RS05765	0.63	-1.6
1,290,069	+		DDA3937_RS05765	0.87	+1.3
1,290,070	-		DDA3937_RS05765	0.87	-0.3
1,290,070	-		DDA3937_RS05765	0.87	+0.5
1,290,172	+				+0.9
1,290,172	+				-0.6
1,290,172	+				+0.1
1,290,172	+				-2.0
1,290,172	+				-0.5
1,290,173	-				+1.1
1,290,173	-				+1.0
1,290,173	-				-0.5
1,290,192	-				-0.8
1,290,192	-				-0.7
1,290,207	+				+1.1
1,290,207	+				-1.0
1,290,207	+				-0.7
1,290,207	+				-0.2
1,290,207	+				-0.2
1,290,207	+				-2.6
1,290,207	+				-0.6
1,290,207	+				-0.8
1,290,207	+				-1.0
1,290,208	-				-0.4
1,290,208	-				+0.1
1,290,208	-				-0.6
1,290,208	-				+0.3
1,290,208	-				-0.0
1,290,208	-				+0.1
1,290,208	-				+0.7
1,290,294	+				+0.2
1,290,294	+				-1.0
1,290,295	-				+1.3
1,290,301	+				+1.1
1,290,301	+				-1.2
1,290,301	+				+0.2
1,290,302	-				-0.6
1,290,302	-				+2.8
1,290,432	+		DDA3937_RS05770	0.38	-0.9
1,290,433	-		DDA3937_RS05770	0.38	+0.8
1,290,444	+		DDA3937_RS05770	0.41	+0.3
1,290,466	-		DDA3937_RS05770	0.47	+0.2
1,290,539	+		DDA3937_RS05770	0.67	-0.5
1,290,572	+		DDA3937_RS05770	0.76	+1.1
1,290,572	+		DDA3937_RS05770	0.76	+1.0
1,290,573	-		DDA3937_RS05770	0.76	+0.5
1,290,573	-		DDA3937_RS05770	0.76	+0.2
1,290,573	-		DDA3937_RS05770	0.76	-0.8
1,290,616	+		DDA3937_RS05770	0.88	+1.0
1,290,623	+				-0.4
1,290,623	+				+0.7
1,290,623	+				-0.0
1,290,624	-				-0.3
1,290,658	-				+1.0
1,290,684	-				+0.5
1,290,718	+				-0.4
1,290,719	-				+1.4
1,290,754	-				-0.6
1,290,754	-				-1.4
1,290,814	+				-0.5
1,290,814	+				+0.1
1,290,815	-				-0.0
1,290,815	-				-0.0
1,290,816	+				-0.3
1,290,816	+				-1.0
1,290,839	+				+1.0
1,290,839	+				-1.2
1,290,839	+				-1.2
1,290,839	+				-1.8
1,290,840	-				-0.4
1,290,919	+		DDA3937_RS05775	0.14	-0.5
1,290,920	-		DDA3937_RS05775	0.14	-0.7
1,291,140	+		DDA3937_RS05775	0.54	-1.5
1,291,141	-		DDA3937_RS05775	0.54	-0.6
1,291,141	-		DDA3937_RS05775	0.54	+0.2