Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS00395

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
91,246	+		DDA3937_RS00390	0.50	+1.4
91,400	-		DDA3937_RS00390	0.62	-0.1
91,596	-		DDA3937_RS00390	0.77	-0.9
91,596	-		DDA3937_RS00390	0.77	-0.5
91,838	-				+1.4
91,858	+				-0.9
91,859	-				+1.4
91,859	-				+2.2
91,949	+				-0.0
91,949	+				+0.3
91,949	+				+0.1
91,949	+				+1.7
91,949	+				-0.8
91,950	-				-0.9
91,950	-				-1.2
91,950	-				-0.3
91,950	-				+0.4
91,950	-				-0.0
91,950	-				+0.5
92,010	-				-0.0
92,010	-				+0.7
92,028	+				+0.1
92,048	-				+0.3
92,569	+		DDA3937_RS00395	0.25	+0.4
92,570	-		DDA3937_RS00395	0.25	+0.5
92,654	+		DDA3937_RS00395	0.30	-1.0
92,654	+		DDA3937_RS00395	0.30	-2.6
92,681	-		DDA3937_RS00395	0.32	-0.0
92,681	-		DDA3937_RS00395	0.32	+0.3
92,746	+		DDA3937_RS00395	0.36	-0.8
92,922	+		DDA3937_RS00395	0.47	+0.2
93,001	-		DDA3937_RS00395	0.52	+0.8
93,009	+		DDA3937_RS00395	0.52	-2.1
93,010	-		DDA3937_RS00395	0.53	-0.5
93,010	-		DDA3937_RS00395	0.53	-0.1
93,048	-		DDA3937_RS00395	0.55	-0.2
93,199	+		DDA3937_RS00395	0.64	+0.1
93,377	-		DDA3937_RS00395	0.76	-0.1
93,604	+				-1.1
93,706	+				-0.2
93,710	+				-1.0
93,718	+				-1.3
93,719	-				+0.5
93,719	-				-0.1
93,809	+				+0.4
93,809	+				-0.2
93,809	+				+0.5
93,809	+				+1.2
93,809	+				+0.1
93,809	+				+0.1
93,809	+				+0.1
93,809	+				+1.3
93,809	+				-1.8
93,809	+				+1.2
93,809	+				-0.3
93,809	+				+0.7
93,809	+				+0.7
93,809	+				+0.6
93,809	+				+2.1
93,810	-				-0.2
93,810	-				+0.0
93,810	-				+0.8
93,810	-				+0.4
93,810	-				+0.2
93,810	-				-0.0
93,810	-				-0.6
93,810	-				-0.1
93,812	+				+0.6
93,812	+				+0.1
93,812	+				+0.6
93,812	+				+0.1
93,812	+				+0.2
93,812	+				-0.2
93,812	+				-0.4
93,812	+				-0.1
93,812	+				+0.4
93,812	+				-1.0
93,812	+				+0.0
93,812	+				+0.5
93,812	+				+0.7
93,812	+				-0.1
93,812	+				-0.1
93,812	+				+2.4
93,812	+				+0.4
93,812	+				+0.4
93,812	+				-0.6
93,812	+				-0.3
93,813	-				+0.1
93,813	-				-0.7
93,813	-				-0.2
93,813	-				+0.4
93,813	-				+0.6
93,813	-				-0.4
93,813	-				-0.2
93,813	-				-0.3
93,813	-				-0.2
93,813	-				+0.3
93,813	-				-0.9
93,813	-				+0.4
93,813	-				+0.5
93,813	-				+0.8
94,050	-		DDA3937_RS00400	0.14	-0.1
94,131	+		DDA3937_RS00400	0.19	-0.8
94,191	-		DDA3937_RS00400	0.23	-0.7
94,362	+		DDA3937_RS00400	0.33	+0.4
94,363	-		DDA3937_RS00400	0.33	+0.2
94,437	+		DDA3937_RS00400	0.37	-0.2
94,438	-		DDA3937_RS00400	0.37	+0.0
94,438	-		DDA3937_RS00400	0.37	-0.1
94,438	-		DDA3937_RS00400	0.37	-0.5
94,438	-		DDA3937_RS00400	0.37	-0.9
94,451	+		DDA3937_RS00400	0.38	+0.1
94,588	+		DDA3937_RS00400	0.46	-0.0
94,589	-		DDA3937_RS00400	0.46	-1.4
94,594	-		DDA3937_RS00400	0.47	+0.3
94,624	-		DDA3937_RS00400	0.49	+0.9
94,624	-		DDA3937_RS00400	0.49	-0.3
94,624	-		DDA3937_RS00400	0.49	-0.6
94,624	-		DDA3937_RS00400	0.49	+0.2