Strain Fitness in Escherichia coli BL21 around ECD_03766

Experiment: Control_TnN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03765 and ECD_03766 are separated by 16 nucleotidesECD_03766 and ECD_03767 are separated by 23 nucleotides ECD_03765: ECD_03765 - sulfoquinovose isomerase, at 3,977,102 to 3,978,343 _03765 ECD_03766: ECD_03766 - 6-deoxy-6-sulfofructose-1-phosphate aldolase, at 3,978,360 to 3,979,238 _03766 ECD_03767: ECD_03767 - 3-sulfolactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent, at 3,979,262 to 3,980,158 _03767 Position (kb) 3978 3979 3980Strain fitness (log2 ratio) -1 0 1 2at 3977.402 kb on + strand, within ECD_03765at 3977.443 kb on + strand, within ECD_03765at 3977.444 kb on - strand, within ECD_03765at 3977.444 kb on - strand, within ECD_03765at 3977.446 kb on - strand, within ECD_03765at 3977.579 kb on + strand, within ECD_03765at 3977.711 kb on - strand, within ECD_03765at 3977.791 kb on - strand, within ECD_03765at 3978.013 kb on - strand, within ECD_03765at 3978.061 kb on - strand, within ECD_03765at 3978.129 kb on + strand, within ECD_03765at 3978.178 kb on + strand, within ECD_03765at 3978.178 kb on + strand, within ECD_03765at 3978.179 kb on - strand, within ECD_03765at 3978.179 kb on - strand, within ECD_03765at 3978.179 kb on - strand, within ECD_03765at 3978.179 kb on - strand, within ECD_03765at 3978.179 kb on - strand, within ECD_03765at 3978.179 kb on - strand, within ECD_03765at 3978.179 kb on - strand, within ECD_03765at 3978.324 kb on - strandat 3978.324 kb on - strandat 3978.581 kb on + strand, within ECD_03766at 3978.582 kb on - strand, within ECD_03766at 3978.582 kb on - strand, within ECD_03766at 3978.665 kb on - strand, within ECD_03766at 3978.775 kb on - strand, within ECD_03766at 3978.819 kb on - strand, within ECD_03766at 3978.849 kb on - strand, within ECD_03766at 3978.901 kb on - strand, within ECD_03766at 3978.901 kb on - strand, within ECD_03766at 3978.944 kb on + strand, within ECD_03766at 3979.064 kb on - strand, within ECD_03766at 3979.211 kb on + strandat 3979.228 kb on + strandat 3979.228 kb on + strandat 3979.229 kb on - strandat 3979.229 kb on - strandat 3979.232 kb on + strandat 3979.232 kb on + strandat 3979.232 kb on + strandat 3979.233 kb on - strandat 3979.233 kb on - strandat 3979.244 kb on + strandat 3979.360 kb on + strand, within ECD_03767at 3979.360 kb on + strand, within ECD_03767at 3979.361 kb on - strand, within ECD_03767at 3979.361 kb on - strand, within ECD_03767at 3979.362 kb on + strand, within ECD_03767at 3979.363 kb on - strand, within ECD_03767at 3979.363 kb on - strand, within ECD_03767at 3979.442 kb on - strand, within ECD_03767at 3979.632 kb on + strand, within ECD_03767at 3979.632 kb on + strand, within ECD_03767at 3979.632 kb on + strand, within ECD_03767at 3979.633 kb on - strand, within ECD_03767at 3979.633 kb on - strand, within ECD_03767at 3979.633 kb on - strand, within ECD_03767at 3979.757 kb on + strand, within ECD_03767at 3979.789 kb on + strand, within ECD_03767at 3979.789 kb on + strand, within ECD_03767at 3979.789 kb on + strand, within ECD_03767at 3979.790 kb on - strand, within ECD_03767at 3979.850 kb on - strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.882 kb on - strand, within ECD_03767at 3979.901 kb on - strand, within ECD_03767at 3979.904 kb on + strand, within ECD_03767at 3979.905 kb on - strand, within ECD_03767at 3979.973 kb on - strand, within ECD_03767at 3979.978 kb on + strand, within ECD_03767

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnN
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3,977,402 + ECD_03765 0.24 +0.0
3,977,443 + ECD_03765 0.27 -0.2
3,977,444 - ECD_03765 0.28 +0.1
3,977,444 - ECD_03765 0.28 +0.4
3,977,446 - ECD_03765 0.28 +0.0
3,977,579 + ECD_03765 0.38 -0.1
3,977,711 - ECD_03765 0.49 -0.1
3,977,791 - ECD_03765 0.55 +0.1
3,978,013 - ECD_03765 0.73 +0.6
3,978,061 - ECD_03765 0.77 +0.8
3,978,129 + ECD_03765 0.83 +0.3
3,978,178 + ECD_03765 0.87 +0.1
3,978,178 + ECD_03765 0.87 -0.3
3,978,179 - ECD_03765 0.87 +0.5
3,978,179 - ECD_03765 0.87 +1.0
3,978,179 - ECD_03765 0.87 +1.0
3,978,179 - ECD_03765 0.87 -0.0
3,978,179 - ECD_03765 0.87 -1.4
3,978,179 - ECD_03765 0.87 +1.1
3,978,179 - ECD_03765 0.87 +1.6
3,978,324 - +0.3
3,978,324 - -0.2
3,978,581 + ECD_03766 0.25 -0.9
3,978,582 - ECD_03766 0.25 -0.2
3,978,582 - ECD_03766 0.25 +1.0
3,978,665 - ECD_03766 0.35 +0.4
3,978,775 - ECD_03766 0.47 +1.5
3,978,819 - ECD_03766 0.52 +0.5
3,978,849 - ECD_03766 0.56 +0.0
3,978,901 - ECD_03766 0.62 -1.3
3,978,901 - ECD_03766 0.62 -0.5
3,978,944 + ECD_03766 0.66 +2.2
3,979,064 - ECD_03766 0.80 +0.8
3,979,211 + +0.4
3,979,228 + +0.7
3,979,228 + -0.6
3,979,229 - -1.7
3,979,229 - +2.1
3,979,232 + +0.2
3,979,232 + -0.2
3,979,232 + -0.6
3,979,233 - -1.2
3,979,233 - -0.4
3,979,244 + +0.5
3,979,360 + ECD_03767 0.11 +0.1
3,979,360 + ECD_03767 0.11 +0.4
3,979,361 - ECD_03767 0.11 -0.5
3,979,361 - ECD_03767 0.11 -1.1
3,979,362 + ECD_03767 0.11 +0.3
3,979,363 - ECD_03767 0.11 +1.9
3,979,363 - ECD_03767 0.11 -0.2
3,979,442 - ECD_03767 0.20 +0.4
3,979,632 + ECD_03767 0.41 -0.1
3,979,632 + ECD_03767 0.41 +2.0
3,979,632 + ECD_03767 0.41 +0.0
3,979,633 - ECD_03767 0.41 +0.0
3,979,633 - ECD_03767 0.41 -0.4
3,979,633 - ECD_03767 0.41 -0.5
3,979,757 + ECD_03767 0.55 +0.3
3,979,789 + ECD_03767 0.59 -0.3
3,979,789 + ECD_03767 0.59 +0.3
3,979,789 + ECD_03767 0.59 -0.3
3,979,790 - ECD_03767 0.59 -0.2
3,979,850 - ECD_03767 0.66 +0.0
3,979,879 + ECD_03767 0.69 -1.7
3,979,879 + ECD_03767 0.69 -0.5
3,979,879 + ECD_03767 0.69 +0.3
3,979,879 + ECD_03767 0.69 +1.2
3,979,879 + ECD_03767 0.69 -0.1
3,979,879 + ECD_03767 0.69 +0.8
3,979,879 + ECD_03767 0.69 -0.5
3,979,880 - ECD_03767 0.69 +0.4
3,979,880 - ECD_03767 0.69 +0.8
3,979,880 - ECD_03767 0.69 +0.4
3,979,880 - ECD_03767 0.69 +0.1
3,979,880 - ECD_03767 0.69 +1.6
3,979,880 - ECD_03767 0.69 -0.4
3,979,882 - ECD_03767 0.69 -0.1
3,979,901 - ECD_03767 0.71 -0.4
3,979,904 + ECD_03767 0.72 +0.8
3,979,905 - ECD_03767 0.72 +0.3
3,979,973 - ECD_03767 0.79 +0.1
3,979,978 + ECD_03767 0.80 +1.2

Or see this region's nucleotide sequence