Experiment: Control_TnN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03765 and ECD_03766 are separated by 16 nucleotides ECD_03766 and ECD_03767 are separated by 23 nucleotides
ECD_03765: ECD_03765 - sulfoquinovose isomerase, at 3,977,102 to 3,978,343
_03765
ECD_03766: ECD_03766 - 6-deoxy-6-sulfofructose-1-phosphate aldolase, at 3,978,360 to 3,979,238
_03766
ECD_03767: ECD_03767 - 3-sulfolactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent, at 3,979,262 to 3,980,158
_03767
Position (kb)
3978
3979
3980 Strain fitness (log2 ratio)
-1
0
1
2 at 3977.402 kb on + strand, within ECD_03765 at 3977.443 kb on + strand, within ECD_03765 at 3977.444 kb on - strand, within ECD_03765 at 3977.444 kb on - strand, within ECD_03765 at 3977.446 kb on - strand, within ECD_03765 at 3977.579 kb on + strand, within ECD_03765 at 3977.711 kb on - strand, within ECD_03765 at 3977.791 kb on - strand, within ECD_03765 at 3978.013 kb on - strand, within ECD_03765 at 3978.061 kb on - strand, within ECD_03765 at 3978.129 kb on + strand, within ECD_03765 at 3978.178 kb on + strand, within ECD_03765 at 3978.178 kb on + strand, within ECD_03765 at 3978.179 kb on - strand, within ECD_03765 at 3978.179 kb on - strand, within ECD_03765 at 3978.179 kb on - strand, within ECD_03765 at 3978.179 kb on - strand, within ECD_03765 at 3978.179 kb on - strand, within ECD_03765 at 3978.179 kb on - strand, within ECD_03765 at 3978.179 kb on - strand, within ECD_03765 at 3978.324 kb on - strand at 3978.324 kb on - strand at 3978.581 kb on + strand, within ECD_03766 at 3978.582 kb on - strand, within ECD_03766 at 3978.582 kb on - strand, within ECD_03766 at 3978.665 kb on - strand, within ECD_03766 at 3978.775 kb on - strand, within ECD_03766 at 3978.819 kb on - strand, within ECD_03766 at 3978.849 kb on - strand, within ECD_03766 at 3978.901 kb on - strand, within ECD_03766 at 3978.901 kb on - strand, within ECD_03766 at 3978.944 kb on + strand, within ECD_03766 at 3979.064 kb on - strand, within ECD_03766 at 3979.211 kb on + strand at 3979.228 kb on + strand at 3979.228 kb on + strand at 3979.229 kb on - strand at 3979.229 kb on - strand at 3979.232 kb on + strand at 3979.232 kb on + strand at 3979.232 kb on + strand at 3979.233 kb on - strand at 3979.233 kb on - strand at 3979.244 kb on + strand at 3979.360 kb on + strand, within ECD_03767 at 3979.360 kb on + strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.362 kb on + strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.442 kb on - strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.757 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.790 kb on - strand, within ECD_03767 at 3979.850 kb on - strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.882 kb on - strand, within ECD_03767 at 3979.901 kb on - strand, within ECD_03767 at 3979.904 kb on + strand, within ECD_03767 at 3979.905 kb on - strand, within ECD_03767 at 3979.973 kb on - strand, within ECD_03767 at 3979.978 kb on + strand, within ECD_03767
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnN remove 3,977,402 + ECD_03765 0.24 +0.0 3,977,443 + ECD_03765 0.27 -0.2 3,977,444 - ECD_03765 0.28 +0.1 3,977,444 - ECD_03765 0.28 +0.4 3,977,446 - ECD_03765 0.28 +0.0 3,977,579 + ECD_03765 0.38 -0.1 3,977,711 - ECD_03765 0.49 -0.1 3,977,791 - ECD_03765 0.55 +0.1 3,978,013 - ECD_03765 0.73 +0.6 3,978,061 - ECD_03765 0.77 +0.8 3,978,129 + ECD_03765 0.83 +0.3 3,978,178 + ECD_03765 0.87 +0.1 3,978,178 + ECD_03765 0.87 -0.3 3,978,179 - ECD_03765 0.87 +0.5 3,978,179 - ECD_03765 0.87 +1.0 3,978,179 - ECD_03765 0.87 +1.0 3,978,179 - ECD_03765 0.87 -0.0 3,978,179 - ECD_03765 0.87 -1.4 3,978,179 - ECD_03765 0.87 +1.1 3,978,179 - ECD_03765 0.87 +1.6 3,978,324 - +0.3 3,978,324 - -0.2 3,978,581 + ECD_03766 0.25 -0.9 3,978,582 - ECD_03766 0.25 -0.2 3,978,582 - ECD_03766 0.25 +1.0 3,978,665 - ECD_03766 0.35 +0.4 3,978,775 - ECD_03766 0.47 +1.5 3,978,819 - ECD_03766 0.52 +0.5 3,978,849 - ECD_03766 0.56 +0.0 3,978,901 - ECD_03766 0.62 -1.3 3,978,901 - ECD_03766 0.62 -0.5 3,978,944 + ECD_03766 0.66 +2.2 3,979,064 - ECD_03766 0.80 +0.8 3,979,211 + +0.4 3,979,228 + +0.7 3,979,228 + -0.6 3,979,229 - -1.7 3,979,229 - +2.1 3,979,232 + +0.2 3,979,232 + -0.2 3,979,232 + -0.6 3,979,233 - -1.2 3,979,233 - -0.4 3,979,244 + +0.5 3,979,360 + ECD_03767 0.11 +0.1 3,979,360 + ECD_03767 0.11 +0.4 3,979,361 - ECD_03767 0.11 -0.5 3,979,361 - ECD_03767 0.11 -1.1 3,979,362 + ECD_03767 0.11 +0.3 3,979,363 - ECD_03767 0.11 +1.9 3,979,363 - ECD_03767 0.11 -0.2 3,979,442 - ECD_03767 0.20 +0.4 3,979,632 + ECD_03767 0.41 -0.1 3,979,632 + ECD_03767 0.41 +2.0 3,979,632 + ECD_03767 0.41 +0.0 3,979,633 - ECD_03767 0.41 +0.0 3,979,633 - ECD_03767 0.41 -0.4 3,979,633 - ECD_03767 0.41 -0.5 3,979,757 + ECD_03767 0.55 +0.3 3,979,789 + ECD_03767 0.59 -0.3 3,979,789 + ECD_03767 0.59 +0.3 3,979,789 + ECD_03767 0.59 -0.3 3,979,790 - ECD_03767 0.59 -0.2 3,979,850 - ECD_03767 0.66 +0.0 3,979,879 + ECD_03767 0.69 -1.7 3,979,879 + ECD_03767 0.69 -0.5 3,979,879 + ECD_03767 0.69 +0.3 3,979,879 + ECD_03767 0.69 +1.2 3,979,879 + ECD_03767 0.69 -0.1 3,979,879 + ECD_03767 0.69 +0.8 3,979,879 + ECD_03767 0.69 -0.5 3,979,880 - ECD_03767 0.69 +0.4 3,979,880 - ECD_03767 0.69 +0.8 3,979,880 - ECD_03767 0.69 +0.4 3,979,880 - ECD_03767 0.69 +0.1 3,979,880 - ECD_03767 0.69 +1.6 3,979,880 - ECD_03767 0.69 -0.4 3,979,882 - ECD_03767 0.69 -0.1 3,979,901 - ECD_03767 0.71 -0.4 3,979,904 + ECD_03767 0.72 +0.8 3,979,905 - ECD_03767 0.72 +0.3 3,979,973 - ECD_03767 0.79 +0.1 3,979,978 + ECD_03767 0.80 +1.2
Or see this region's nucleotide sequence