Experiment: Control_TnN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02744 and ECD_02745 are separated by 255 nucleotides ECD_02745 and ECD_02746 are separated by 55 nucleotides ECD_02746 and ECD_02747 are separated by 141 nucleotides
ECD_02744: ECD_02744 - D-3-phosphoglycerate dehydrogenase, at 2,888,036 to 2,889,268
_02744
ECD_02745: ECD_02745 - ribose 5-phosphate isomerase, constitutive, at 2,889,524 to 2,890,183
_02745
ECD_02746: ECD_02746 - hypothetical protein, at 2,890,239 to 2,890,469
_02746
ECD_02747: ECD_02747 - transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor, at 2,890,611 to 2,891,504
_02747
Position (kb)
2890
2891 Strain fitness (log2 ratio)
-1
0
1
2 at 2889.271 kb on - strand at 2889.271 kb on - strand at 2889.326 kb on - strand at 2889.335 kb on + strand at 2889.380 kb on + strand at 2889.409 kb on - strand at 2889.409 kb on - strand at 2889.428 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.221 kb on - strand at 2890.222 kb on + strand at 2890.223 kb on - strand at 2890.320 kb on + strand, within ECD_02746 at 2890.321 kb on - strand, within ECD_02746 at 2890.342 kb on - strand, within ECD_02746 at 2890.504 kb on + strand at 2890.514 kb on + strand at 2890.514 kb on + strand at 2890.514 kb on + strand at 2890.515 kb on - strand at 2890.515 kb on - strand at 2890.543 kb on - strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.544 kb on + strand at 2890.545 kb on - strand at 2890.590 kb on + strand at 2890.590 kb on + strand at 2890.590 kb on + strand at 2890.590 kb on + strand at 2890.591 kb on - strand at 2890.591 kb on - strand at 2890.626 kb on + strand at 2890.627 kb on - strand at 2890.637 kb on - strand at 2890.700 kb on + strand at 2890.700 kb on + strand at 2890.700 kb on + strand at 2890.700 kb on + strand at 2890.727 kb on + strand, within ECD_02747 at 2890.727 kb on + strand, within ECD_02747 at 2890.985 kb on - strand, within ECD_02747 at 2891.045 kb on + strand, within ECD_02747 at 2891.046 kb on - strand, within ECD_02747 at 2891.208 kb on - strand, within ECD_02747 at 2891.274 kb on - strand, within ECD_02747 at 2891.274 kb on - strand, within ECD_02747 at 2891.324 kb on + strand, within ECD_02747 at 2891.324 kb on + strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.325 kb on - strand, within ECD_02747 at 2891.380 kb on + strand, within ECD_02747 at 2891.392 kb on + strand, within ECD_02747 at 2891.392 kb on + strand, within ECD_02747
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnN remove 2,889,271 - -0.4 2,889,271 - +0.6 2,889,326 - +0.1 2,889,335 + -0.8 2,889,380 + +0.3 2,889,409 - -0.7 2,889,409 - +0.3 2,889,428 - +0.7 2,890,221 - +1.1 2,890,221 - -0.9 2,890,221 - +2.0 2,890,221 - -0.2 2,890,221 - +1.2 2,890,221 - +0.2 2,890,221 - -0.4 2,890,222 + +0.2 2,890,223 - +0.2 2,890,320 + ECD_02746 0.35 -0.8 2,890,321 - ECD_02746 0.35 -1.0 2,890,342 - ECD_02746 0.45 +0.2 2,890,504 + +0.2 2,890,514 + -0.6 2,890,514 + +0.2 2,890,514 + +0.6 2,890,515 - -0.6 2,890,515 - +0.2 2,890,543 - -0.4 2,890,544 + -0.3 2,890,544 + +0.1 2,890,544 + -1.0 2,890,544 + -0.5 2,890,544 + -1.1 2,890,544 + +0.3 2,890,544 + +0.1 2,890,544 + -0.6 2,890,544 + +0.1 2,890,545 - -1.4 2,890,590 + +0.4 2,890,590 + +0.1 2,890,590 + -1.5 2,890,590 + -0.4 2,890,591 - +0.5 2,890,591 - +0.8 2,890,626 + +1.5 2,890,627 - -0.7 2,890,637 - +0.7 2,890,700 + -0.5 2,890,700 + -0.4 2,890,700 + +0.2 2,890,700 + +1.1 2,890,727 + ECD_02747 0.13 -0.0 2,890,727 + ECD_02747 0.13 +0.6 2,890,985 - ECD_02747 0.42 -0.9 2,891,045 + ECD_02747 0.49 -0.2 2,891,046 - ECD_02747 0.49 +0.9 2,891,208 - ECD_02747 0.67 +0.7 2,891,274 - ECD_02747 0.74 +1.3 2,891,274 - ECD_02747 0.74 -0.0 2,891,324 + ECD_02747 0.80 -0.1 2,891,324 + ECD_02747 0.80 -0.7 2,891,325 - ECD_02747 0.80 +0.2 2,891,325 - ECD_02747 0.80 +0.3 2,891,325 - ECD_02747 0.80 -0.3 2,891,325 - ECD_02747 0.80 +0.1 2,891,380 + ECD_02747 0.86 -0.8 2,891,392 + ECD_02747 0.87 +0.7 2,891,392 + ECD_02747 0.87 -0.2
Or see this region's nucleotide sequence