Strain Fitness in Escherichia coli BL21 around ECD_02746

Experiment: Control_TnN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02744 and ECD_02745 are separated by 255 nucleotidesECD_02745 and ECD_02746 are separated by 55 nucleotidesECD_02746 and ECD_02747 are separated by 141 nucleotides ECD_02744: ECD_02744 - D-3-phosphoglycerate dehydrogenase, at 2,888,036 to 2,889,268 _02744 ECD_02745: ECD_02745 - ribose 5-phosphate isomerase, constitutive, at 2,889,524 to 2,890,183 _02745 ECD_02746: ECD_02746 - hypothetical protein, at 2,890,239 to 2,890,469 _02746 ECD_02747: ECD_02747 - transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor, at 2,890,611 to 2,891,504 _02747 Position (kb) 2890 2891Strain fitness (log2 ratio) -1 0 1 2at 2889.271 kb on - strandat 2889.271 kb on - strandat 2889.326 kb on - strandat 2889.335 kb on + strandat 2889.380 kb on + strandat 2889.409 kb on - strandat 2889.409 kb on - strandat 2889.428 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.221 kb on - strandat 2890.222 kb on + strandat 2890.223 kb on - strandat 2890.320 kb on + strand, within ECD_02746at 2890.321 kb on - strand, within ECD_02746at 2890.342 kb on - strand, within ECD_02746at 2890.504 kb on + strandat 2890.514 kb on + strandat 2890.514 kb on + strandat 2890.514 kb on + strandat 2890.515 kb on - strandat 2890.515 kb on - strandat 2890.543 kb on - strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.544 kb on + strandat 2890.545 kb on - strandat 2890.590 kb on + strandat 2890.590 kb on + strandat 2890.590 kb on + strandat 2890.590 kb on + strandat 2890.591 kb on - strandat 2890.591 kb on - strandat 2890.626 kb on + strandat 2890.627 kb on - strandat 2890.637 kb on - strandat 2890.700 kb on + strandat 2890.700 kb on + strandat 2890.700 kb on + strandat 2890.700 kb on + strandat 2890.727 kb on + strand, within ECD_02747at 2890.727 kb on + strand, within ECD_02747at 2890.985 kb on - strand, within ECD_02747at 2891.045 kb on + strand, within ECD_02747at 2891.046 kb on - strand, within ECD_02747at 2891.208 kb on - strand, within ECD_02747at 2891.274 kb on - strand, within ECD_02747at 2891.274 kb on - strand, within ECD_02747at 2891.324 kb on + strand, within ECD_02747at 2891.324 kb on + strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.325 kb on - strand, within ECD_02747at 2891.380 kb on + strand, within ECD_02747at 2891.392 kb on + strand, within ECD_02747at 2891.392 kb on + strand, within ECD_02747

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnN
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2,889,271 - -0.4
2,889,271 - +0.6
2,889,326 - +0.1
2,889,335 + -0.8
2,889,380 + +0.3
2,889,409 - -0.7
2,889,409 - +0.3
2,889,428 - +0.7
2,890,221 - +1.1
2,890,221 - -0.9
2,890,221 - +2.0
2,890,221 - -0.2
2,890,221 - +1.2
2,890,221 - +0.2
2,890,221 - -0.4
2,890,222 + +0.2
2,890,223 - +0.2
2,890,320 + ECD_02746 0.35 -0.8
2,890,321 - ECD_02746 0.35 -1.0
2,890,342 - ECD_02746 0.45 +0.2
2,890,504 + +0.2
2,890,514 + -0.6
2,890,514 + +0.2
2,890,514 + +0.6
2,890,515 - -0.6
2,890,515 - +0.2
2,890,543 - -0.4
2,890,544 + -0.3
2,890,544 + +0.1
2,890,544 + -1.0
2,890,544 + -0.5
2,890,544 + -1.1
2,890,544 + +0.3
2,890,544 + +0.1
2,890,544 + -0.6
2,890,544 + +0.1
2,890,545 - -1.4
2,890,590 + +0.4
2,890,590 + +0.1
2,890,590 + -1.5
2,890,590 + -0.4
2,890,591 - +0.5
2,890,591 - +0.8
2,890,626 + +1.5
2,890,627 - -0.7
2,890,637 - +0.7
2,890,700 + -0.5
2,890,700 + -0.4
2,890,700 + +0.2
2,890,700 + +1.1
2,890,727 + ECD_02747 0.13 -0.0
2,890,727 + ECD_02747 0.13 +0.6
2,890,985 - ECD_02747 0.42 -0.9
2,891,045 + ECD_02747 0.49 -0.2
2,891,046 - ECD_02747 0.49 +0.9
2,891,208 - ECD_02747 0.67 +0.7
2,891,274 - ECD_02747 0.74 +1.3
2,891,274 - ECD_02747 0.74 -0.0
2,891,324 + ECD_02747 0.80 -0.1
2,891,324 + ECD_02747 0.80 -0.7
2,891,325 - ECD_02747 0.80 +0.2
2,891,325 - ECD_02747 0.80 +0.3
2,891,325 - ECD_02747 0.80 -0.3
2,891,325 - ECD_02747 0.80 +0.1
2,891,380 + ECD_02747 0.86 -0.8
2,891,392 + ECD_02747 0.87 +0.7
2,891,392 + ECD_02747 0.87 -0.2

Or see this region's nucleotide sequence