Experiment: Control_TnN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02604 and ECD_02607 are separated by 609 nucleotides ECD_02607 and ECD_02608 are separated by 73 nucleotides
ECD_02604: ECD_02604 - putative transposase insL for insertion sequence IS186, at 2,718,018 to 2,719,130
_02604
ECD_02607: ECD_02607 - phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent, at 2,719,740 to 2,720,474
_02607
ECD_02608: ECD_02608 - sulfite reductase, beta subunit, NAD(P)-binding, heme-binding, at 2,720,548 to 2,722,260
_02608
Position (kb)
2719
2720
2721 Strain fitness (log2 ratio)
-1
0
1
2 at 2719.298 kb on + strand at 2719.426 kb on - strand at 2719.431 kb on - strand at 2719.443 kb on + strand at 2719.443 kb on + strand at 2719.444 kb on - strand at 2719.463 kb on - strand at 2719.530 kb on + strand at 2719.530 kb on + strand at 2719.531 kb on - strand at 2719.531 kb on - strand at 2719.545 kb on + strand at 2719.545 kb on + strand at 2719.546 kb on - strand at 2719.629 kb on - strand at 2719.737 kb on + strand at 2719.737 kb on + strand at 2719.827 kb on - strand, within ECD_02607 at 2720.083 kb on + strand, within ECD_02607 at 2720.329 kb on - strand, within ECD_02607 at 2720.475 kb on - strand at 2720.475 kb on - strand at 2720.529 kb on + strand at 2720.529 kb on + strand at 2720.608 kb on - strand at 2720.708 kb on + strand at 2720.709 kb on - strand at 2720.709 kb on - strand at 2720.709 kb on - strand at 2720.709 kb on - strand at 2720.760 kb on - strand, within ECD_02608 at 2720.834 kb on - strand, within ECD_02608 at 2720.879 kb on - strand, within ECD_02608 at 2720.899 kb on - strand, within ECD_02608 at 2721.053 kb on - strand, within ECD_02608 at 2721.199 kb on - strand, within ECD_02608 at 2721.199 kb on - strand, within ECD_02608 at 2721.252 kb on - strand, within ECD_02608 at 2721.252 kb on - strand, within ECD_02608 at 2721.336 kb on - strand, within ECD_02608 at 2721.336 kb on - strand, within ECD_02608 at 2721.418 kb on - strand, within ECD_02608 at 2721.435 kb on - strand, within ECD_02608 at 2721.461 kb on + strand, within ECD_02608
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnN remove 2,719,298 + -0.1 2,719,426 - -1.1 2,719,431 - -0.2 2,719,443 + +0.6 2,719,443 + -0.1 2,719,444 - -0.3 2,719,463 - +0.8 2,719,530 + -0.0 2,719,530 + +0.3 2,719,531 - +0.4 2,719,531 - +2.3 2,719,545 + +0.0 2,719,545 + +0.4 2,719,546 - -1.3 2,719,629 - -0.5 2,719,737 + +0.7 2,719,737 + -0.4 2,719,827 - ECD_02607 0.12 -1.7 2,720,083 + ECD_02607 0.47 +0.2 2,720,329 - ECD_02607 0.80 -0.5 2,720,475 - +0.2 2,720,475 - -0.6 2,720,529 + +0.6 2,720,529 + +2.1 2,720,608 - +0.0 2,720,708 + -0.0 2,720,709 - +0.4 2,720,709 - +0.2 2,720,709 - -0.4 2,720,709 - -0.3 2,720,760 - ECD_02608 0.12 +0.3 2,720,834 - ECD_02608 0.17 +0.4 2,720,879 - ECD_02608 0.19 +0.5 2,720,899 - ECD_02608 0.20 -0.5 2,721,053 - ECD_02608 0.29 +0.3 2,721,199 - ECD_02608 0.38 -0.5 2,721,199 - ECD_02608 0.38 +0.3 2,721,252 - ECD_02608 0.41 -1.0 2,721,252 - ECD_02608 0.41 +1.3 2,721,336 - ECD_02608 0.46 -0.2 2,721,336 - ECD_02608 0.46 +0.3 2,721,418 - ECD_02608 0.51 -0.2 2,721,435 - ECD_02608 0.52 +0.3 2,721,461 + ECD_02608 0.53 +0.5
Or see this region's nucleotide sequence