Strain Fitness in Escherichia coli BL21 around ECD_02081

Experiment: Control_TnN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02080 and ECD_02081 are separated by 141 nucleotidesECD_02081 and ECD_02082 are separated by 16 nucleotidesECD_02082 and ECD_02083 are separated by 257 nucleotides ECD_02080: ECD_02080 - galactose- and fucose-inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor, at 2,135,527 to 2,136,567 _02080 ECD_02081: ECD_02081 - DUF418 family putative inner membrane protein, at 2,136,709 to 2,137,866 _02081 ECD_02082: ECD_02082 - GTP cyclohydrolase I, at 2,137,883 to 2,138,551 _02082 ECD_02083: ECD_02083 - S-formylglutathione hydrolase, at 2,138,809 to 2,139,645 _02083 Position (kb) 2136 2137 2138Strain fitness (log2 ratio) -1 0 1at 2135.773 kb on + strand, within ECD_02080at 2135.845 kb on + strand, within ECD_02080at 2136.034 kb on - strand, within ECD_02080at 2136.275 kb on + strand, within ECD_02080at 2136.276 kb on - strand, within ECD_02080at 2136.276 kb on - strand, within ECD_02080at 2136.297 kb on - strand, within ECD_02080at 2136.568 kb on - strandat 2136.568 kb on - strandat 2136.634 kb on + strandat 2136.723 kb on + strandat 2136.807 kb on + strandat 2136.808 kb on - strandat 2136.932 kb on + strand, within ECD_02081at 2137.072 kb on + strand, within ECD_02081at 2137.072 kb on + strand, within ECD_02081at 2137.073 kb on - strand, within ECD_02081at 2137.187 kb on - strand, within ECD_02081at 2137.265 kb on + strand, within ECD_02081at 2137.266 kb on - strand, within ECD_02081at 2137.568 kb on - strand, within ECD_02081at 2137.808 kb on - strandat 2138.607 kb on - strandat 2138.617 kb on - strandat 2138.628 kb on - strandat 2138.729 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnN
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2,135,773 + ECD_02080 0.24 +0.6
2,135,845 + ECD_02080 0.31 +0.5
2,136,034 - ECD_02080 0.49 +0.3
2,136,275 + ECD_02080 0.72 -0.3
2,136,276 - ECD_02080 0.72 +0.1
2,136,276 - ECD_02080 0.72 +0.6
2,136,297 - ECD_02080 0.74 +0.1
2,136,568 - +0.5
2,136,568 - -1.1
2,136,634 + +0.8
2,136,723 + +0.3
2,136,807 + +0.9
2,136,808 - +0.1
2,136,932 + ECD_02081 0.19 +0.0
2,137,072 + ECD_02081 0.31 -0.6
2,137,072 + ECD_02081 0.31 -0.9
2,137,073 - ECD_02081 0.31 +0.3
2,137,187 - ECD_02081 0.41 -1.0
2,137,265 + ECD_02081 0.48 -0.7
2,137,266 - ECD_02081 0.48 -1.5
2,137,568 - ECD_02081 0.74 -0.4
2,137,808 - +0.2
2,138,607 - -0.2
2,138,617 - -0.4
2,138,628 - -0.3
2,138,729 - +0.1

Or see this region's nucleotide sequence