Experiment: Control_TnN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00791 and ECD_00792 are separated by 130 nucleotides ECD_00792 and ECD_00793 are separated by 75 nucleotides ECD_00793 and ECD_00794 overlap by 1 nucleotides
ECD_00791: ECD_00791 - putative pyruvate formate lyase activating enzyme, at 846,531 to 847,430
_00791
ECD_00792: ECD_00792 - fructose-6-phosphate aldolase 1, at 847,561 to 848,223
_00792
ECD_00793: ECD_00793 - molybdopterin synthase sulfurylase, at 848,299 to 849,048
_00793
ECD_00794: ECD_00794 - molybdopterin molybdenumtransferase; molybdopterin biosynthesis protein, at 849,048 to 850,283
_00794
Position (kb) 847
848
849 Strain fitness (log2 ratio) -2
-1
0
1 at 846.572 kb on - strand at 846.572 kb on - strand at 846.649 kb on + strand, within ECD_00791 at 846.961 kb on - strand, within ECD_00791 at 847.208 kb on + strand, within ECD_00791 at 847.431 kb on - strand at 847.570 kb on + strand at 847.739 kb on + strand, within ECD_00792 at 847.791 kb on + strand, within ECD_00792 at 847.792 kb on - strand, within ECD_00792 at 848.006 kb on + strand, within ECD_00792 at 848.091 kb on - strand, within ECD_00792 at 848.145 kb on + strand, within ECD_00792 at 848.279 kb on - strand at 848.372 kb on + strand at 848.373 kb on - strand at 848.453 kb on - strand, within ECD_00793 at 848.453 kb on - strand, within ECD_00793 at 848.648 kb on - strand, within ECD_00793 at 848.648 kb on - strand, within ECD_00793 at 849.082 kb on - strand at 849.082 kb on - strand at 849.152 kb on + strand at 849.166 kb on - strand at 849.166 kb on - strand at 849.166 kb on - strand at 849.166 kb on - strand at 849.166 kb on - strand at 849.167 kb on + strand at 849.167 kb on + strand at 849.168 kb on - strand at 849.168 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_TnN remove 846,572 - -0.2 846,572 - +0.0 846,649 + ECD_00791 0.13 +0.2 846,961 - ECD_00791 0.48 +0.3 847,208 + ECD_00791 0.75 -0.8 847,431 - +0.7 847,570 + -0.6 847,739 + ECD_00792 0.27 -0.0 847,791 + ECD_00792 0.35 -0.6 847,792 - ECD_00792 0.35 +0.4 848,006 + ECD_00792 0.67 -1.0 848,091 - ECD_00792 0.80 -1.1 848,145 + ECD_00792 0.88 -1.0 848,279 - -0.3 848,372 + +0.8 848,373 - -0.3 848,453 - ECD_00793 0.21 +0.0 848,453 - ECD_00793 0.21 -0.2 848,648 - ECD_00793 0.47 +1.4 848,648 - ECD_00793 0.47 -0.1 849,082 - +0.0 849,082 - -0.2 849,152 + +0.6 849,166 - -0.1 849,166 - -0.7 849,166 - +1.4 849,166 - -0.4 849,166 - -0.3 849,167 + -1.9 849,167 + +0.5 849,168 - +0.7 849,168 - -0.0
Or see this region's nucleotide sequence