Strain Fitness in Escherichia coli BL21 around ECD_00181

Experiment: Control_TnN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00180 and ECD_00181 overlap by 4 nucleotidesECD_00181 and ECD_00182 are separated by 36 nucleotides ECD_00180: ECD_00180 - tetraacyldisaccharide-1-P synthase, at 206,191 to 207,339 _00180 ECD_00181: ECD_00181 - ribonuclease HII, at 207,336 to 207,932 _00181 ECD_00182: ECD_00182 - DNA polymerase III alpha subunit, at 207,969 to 211,451 _00182 Position (kb) 207 208Strain fitness (log2 ratio) -1 0 1at 207.403 kb on + strand, within ECD_00181at 207.645 kb on + strand, within ECD_00181at 207.821 kb on + strand, within ECD_00181

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Per-strain Table

Position Strand Gene LocusTag Fraction Control_TnN
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207,403 + ECD_00181 0.11 -0.1
207,645 + ECD_00181 0.52 -0.6
207,821 + ECD_00181 0.81 -0.6

Or see this region's nucleotide sequence