Experiment: Bas33
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03773 and ECD_03774 are separated by 852 nucleotides ECD_03774 and ECD_03775 are separated by 241 nucleotides ECD_03775 and ECD_03776 are separated by 329 nucleotides
ECD_03773: ECD_03773 - GNAT family putative N-acetyltransferase, at 3,984,036 to 3,985,025
_03773
ECD_03774: ECD_03774 - CopG family putative transcriptional regulator, at 3,985,878 to 3,986,096
_03774
ECD_03775: ECD_03775 - putative thymol sensitivity protein, CopG family putative transcriptional regulator, at 3,986,338 to 3,986,556
_03775
ECD_03776: ECD_03776 - formate dehydrogenase formation protein, at 3,986,886 to 3,987,815
_03776
Position (kb)
3985
3986
3987 Strain fitness (log2 ratio)
-1
0
1 at 3984.963 kb on + strand at 3984.963 kb on + strand at 3984.963 kb on + strand at 3984.963 kb on + strand at 3984.964 kb on - strand at 3984.965 kb on + strand at 3984.997 kb on - strand at 3985.024 kb on - strand at 3985.024 kb on - strand at 3985.069 kb on - strand at 3985.069 kb on - strand at 3985.391 kb on - strand at 3985.844 kb on + strand at 3985.859 kb on + strand at 3985.995 kb on + strand, within ECD_03774 at 3986.025 kb on - strand, within ECD_03774 at 3986.146 kb on - strand at 3986.151 kb on + strand at 3986.192 kb on + strand at 3986.283 kb on + strand at 3986.313 kb on + strand at 3986.313 kb on + strand at 3986.314 kb on - strand at 3986.331 kb on + strand at 3986.333 kb on + strand at 3986.333 kb on + strand at 3986.333 kb on + strand at 3986.338 kb on - strand at 3986.377 kb on - strand, within ECD_03775 at 3986.426 kb on + strand, within ECD_03775 at 3986.426 kb on + strand, within ECD_03775 at 3986.426 kb on + strand, within ECD_03775 at 3986.426 kb on + strand, within ECD_03775 at 3986.426 kb on + strand, within ECD_03775 at 3986.427 kb on - strand, within ECD_03775 at 3986.427 kb on - strand, within ECD_03775 at 3986.427 kb on - strand, within ECD_03775 at 3986.427 kb on - strand, within ECD_03775 at 3986.427 kb on - strand, within ECD_03775 at 3986.535 kb on + strand at 3986.554 kb on + strand at 3986.743 kb on - strand at 3986.761 kb on - strand at 3986.791 kb on - strand at 3986.888 kb on - strand at 3987.019 kb on + strand, within ECD_03776 at 3987.035 kb on - strand, within ECD_03776 at 3987.065 kb on + strand, within ECD_03776
Per-strain Table
Position Strand Gene LocusTag Fraction Bas33 remove 3,984,963 + -1.2 3,984,963 + -0.0 3,984,963 + +0.3 3,984,963 + +0.2 3,984,964 - +0.5 3,984,965 + -0.7 3,984,997 - -0.1 3,985,024 - +0.6 3,985,024 - -0.3 3,985,069 - +0.8 3,985,069 - +0.2 3,985,391 - +0.1 3,985,844 + +0.2 3,985,859 + +0.5 3,985,995 + ECD_03774 0.53 -0.7 3,986,025 - ECD_03774 0.67 -0.4 3,986,146 - -0.7 3,986,151 + +0.5 3,986,192 + -0.2 3,986,283 + -0.4 3,986,313 + +0.3 3,986,313 + -0.5 3,986,314 - +0.2 3,986,331 + +0.9 3,986,333 + -0.0 3,986,333 + -0.1 3,986,333 + -0.4 3,986,338 - -0.0 3,986,377 - ECD_03775 0.18 -0.1 3,986,426 + ECD_03775 0.40 -0.3 3,986,426 + ECD_03775 0.40 -0.2 3,986,426 + ECD_03775 0.40 -0.2 3,986,426 + ECD_03775 0.40 +0.0 3,986,426 + ECD_03775 0.40 +0.2 3,986,427 - ECD_03775 0.41 +0.3 3,986,427 - ECD_03775 0.41 -0.6 3,986,427 - ECD_03775 0.41 -1.5 3,986,427 - ECD_03775 0.41 -0.3 3,986,427 - ECD_03775 0.41 -0.9 3,986,535 + +0.9 3,986,554 + +0.6 3,986,743 - +0.0 3,986,761 - -0.2 3,986,791 - -0.1 3,986,888 - +0.3 3,987,019 + ECD_03776 0.14 +0.2 3,987,035 - ECD_03776 0.16 +0.3 3,987,065 + ECD_03776 0.19 +0.7
Or see this region's nucleotide sequence