Strain Fitness in Escherichia coli BL21 around ECD_03293

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03292 and ECD_03293 are separated by 236 nucleotidesECD_03293 and ECD_03294 overlap by 1 nucleotidesECD_03294 and ECD_03295 are separated by 449 nucleotides ECD_03292: ECD_03292 - aminoacyl nucleotide detoxifying acetyltransferase, at 3,444,287 to 3,444,775 _03292 ECD_03293: ECD_03293 - putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity, at 3,445,012 to 3,446,190 _03293 ECD_03294: ECD_03294 - hypothetical protein, at 3,446,190 to 3,446,681 _03294 ECD_03295: ECD_03295 - stable heat shock chaperone, at 3,447,131 to 3,447,415 _03295 Position (kb) 3445 3446 3447Strain fitness (log2 ratio) -1 0 1 2at 3444.052 kb on - strandat 3444.101 kb on + strandat 3444.101 kb on + strandat 3444.102 kb on - strandat 3444.102 kb on - strandat 3444.173 kb on + strandat 3444.266 kb on + strandat 3444.298 kb on - strandat 3444.298 kb on - strandat 3444.298 kb on - strandat 3444.301 kb on - strandat 3444.301 kb on - strandat 3444.304 kb on - strandat 3444.304 kb on - strandat 3444.365 kb on + strand, within ECD_03292at 3444.365 kb on + strand, within ECD_03292at 3444.366 kb on - strand, within ECD_03292at 3444.366 kb on - strand, within ECD_03292at 3444.366 kb on - strand, within ECD_03292at 3444.366 kb on - strand, within ECD_03292at 3444.378 kb on + strand, within ECD_03292at 3444.379 kb on - strand, within ECD_03292at 3444.379 kb on - strand, within ECD_03292at 3444.379 kb on - strand, within ECD_03292at 3444.403 kb on + strand, within ECD_03292at 3444.403 kb on + strand, within ECD_03292at 3444.403 kb on + strand, within ECD_03292at 3444.403 kb on + strand, within ECD_03292at 3444.403 kb on + strand, within ECD_03292at 3444.404 kb on - strand, within ECD_03292at 3444.404 kb on - strand, within ECD_03292at 3444.404 kb on - strand, within ECD_03292at 3444.404 kb on - strand, within ECD_03292at 3444.404 kb on - strand, within ECD_03292at 3444.458 kb on - strand, within ECD_03292at 3444.536 kb on - strand, within ECD_03292at 3444.624 kb on + strand, within ECD_03292at 3444.640 kb on - strand, within ECD_03292at 3444.670 kb on + strand, within ECD_03292at 3444.679 kb on + strand, within ECD_03292at 3444.713 kb on - strand, within ECD_03292at 3444.740 kb on + strandat 3444.740 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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3,444,052 - +0.4
3,444,101 + -0.3
3,444,101 + +0.2
3,444,102 - +0.1
3,444,102 - -0.0
3,444,173 + +0.9
3,444,266 + -0.5
3,444,298 - +0.5
3,444,298 - -0.0
3,444,298 - +1.7
3,444,301 - +0.0
3,444,301 - +0.6
3,444,304 - -0.1
3,444,304 - +0.1
3,444,365 + ECD_03292 0.16 +1.0
3,444,365 + ECD_03292 0.16 +2.1
3,444,366 - ECD_03292 0.16 -0.1
3,444,366 - ECD_03292 0.16 +0.3
3,444,366 - ECD_03292 0.16 +0.5
3,444,366 - ECD_03292 0.16 +0.7
3,444,378 + ECD_03292 0.19 +2.1
3,444,379 - ECD_03292 0.19 +0.4
3,444,379 - ECD_03292 0.19 -0.3
3,444,379 - ECD_03292 0.19 +0.7
3,444,403 + ECD_03292 0.24 -0.7
3,444,403 + ECD_03292 0.24 +0.7
3,444,403 + ECD_03292 0.24 +0.5
3,444,403 + ECD_03292 0.24 +0.0
3,444,403 + ECD_03292 0.24 -0.2
3,444,404 - ECD_03292 0.24 +0.8
3,444,404 - ECD_03292 0.24 -0.5
3,444,404 - ECD_03292 0.24 -0.4
3,444,404 - ECD_03292 0.24 +0.0
3,444,404 - ECD_03292 0.24 +0.8
3,444,458 - ECD_03292 0.35 +1.6
3,444,536 - ECD_03292 0.51 +1.0
3,444,624 + ECD_03292 0.69 +1.3
3,444,640 - ECD_03292 0.72 +0.8
3,444,670 + ECD_03292 0.78 -0.3
3,444,679 + ECD_03292 0.80 -0.1
3,444,713 - ECD_03292 0.87 -0.3
3,444,740 + -0.7
3,444,740 + -0.2

Or see this region's nucleotide sequence