Strain Fitness in Escherichia coli BL21 around ECD_03269

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03268 and ECD_03269 are separated by 9 nucleotidesECD_03269 and ECD_03270 are separated by 611 nucleotides ECD_03268: ECD_03268 - 4-alpha-glucanotransferase (amylomaltase), at 3,408,282 to 3,410,366 _03268 ECD_03269: ECD_03269 - maltodextrin phosphorylase, at 3,410,376 to 3,412,769 _03269 ECD_03270: ECD_03270 - mal regulon transcriptional activator, at 3,413,381 to 3,416,086 _03270 Position (kb) 3410 3411 3412 3413Strain fitness (log2 ratio) -1 0 1 2at 3409.402 kb on + strand, within ECD_03268at 3409.402 kb on + strand, within ECD_03268at 3409.402 kb on + strand, within ECD_03268at 3409.402 kb on + strand, within ECD_03268at 3409.403 kb on - strand, within ECD_03268at 3409.403 kb on - strand, within ECD_03268at 3409.465 kb on - strand, within ECD_03268at 3409.465 kb on - strand, within ECD_03268at 3409.465 kb on - strand, within ECD_03268at 3409.465 kb on - strand, within ECD_03268at 3409.465 kb on - strand, within ECD_03268at 3409.465 kb on - strand, within ECD_03268at 3409.579 kb on - strand, within ECD_03268at 3409.579 kb on - strand, within ECD_03268at 3409.730 kb on - strand, within ECD_03268at 3409.730 kb on - strand, within ECD_03268at 3409.766 kb on - strand, within ECD_03268at 3409.795 kb on + strand, within ECD_03268at 3409.913 kb on + strand, within ECD_03268at 3409.914 kb on - strand, within ECD_03268at 3409.916 kb on - strand, within ECD_03268at 3409.916 kb on - strand, within ECD_03268at 3409.972 kb on + strand, within ECD_03268at 3409.972 kb on + strand, within ECD_03268at 3410.068 kb on - strand, within ECD_03268at 3410.092 kb on - strand, within ECD_03268at 3410.092 kb on - strand, within ECD_03268at 3410.092 kb on - strand, within ECD_03268at 3410.104 kb on + strand, within ECD_03268at 3410.104 kb on + strand, within ECD_03268at 3410.104 kb on + strand, within ECD_03268at 3410.105 kb on - strand, within ECD_03268at 3410.105 kb on - strand, within ECD_03268at 3410.105 kb on - strand, within ECD_03268at 3410.105 kb on - strand, within ECD_03268at 3410.139 kb on - strand, within ECD_03268at 3410.139 kb on - strand, within ECD_03268at 3410.139 kb on - strand, within ECD_03268at 3410.139 kb on - strand, within ECD_03268at 3410.139 kb on - strand, within ECD_03268at 3410.140 kb on + strand, within ECD_03268at 3410.140 kb on + strand, within ECD_03268at 3410.141 kb on - strand, within ECD_03268at 3410.189 kb on - strandat 3410.189 kb on - strandat 3410.312 kb on - strandat 3410.396 kb on + strandat 3410.432 kb on + strandat 3410.433 kb on - strandat 3410.433 kb on - strandat 3410.433 kb on - strandat 3410.439 kb on - strandat 3410.524 kb on - strandat 3410.527 kb on + strandat 3410.528 kb on - strandat 3410.528 kb on - strandat 3410.528 kb on - strandat 3410.528 kb on - strandat 3410.528 kb on - strandat 3410.528 kb on - strandat 3410.528 kb on - strandat 3410.623 kb on + strand, within ECD_03269at 3410.624 kb on - strand, within ECD_03269at 3410.628 kb on - strand, within ECD_03269at 3410.628 kb on - strand, within ECD_03269at 3410.628 kb on - strand, within ECD_03269at 3410.650 kb on - strand, within ECD_03269at 3410.666 kb on + strand, within ECD_03269at 3410.667 kb on - strand, within ECD_03269at 3410.667 kb on - strand, within ECD_03269at 3410.732 kb on + strand, within ECD_03269at 3410.745 kb on - strand, within ECD_03269at 3410.811 kb on - strand, within ECD_03269at 3410.811 kb on - strand, within ECD_03269at 3410.838 kb on - strand, within ECD_03269at 3411.032 kb on - strand, within ECD_03269at 3411.032 kb on - strand, within ECD_03269at 3411.035 kb on - strand, within ECD_03269at 3411.113 kb on - strand, within ECD_03269at 3411.126 kb on - strand, within ECD_03269at 3411.126 kb on - strand, within ECD_03269at 3411.126 kb on - strand, within ECD_03269at 3411.154 kb on + strand, within ECD_03269at 3411.154 kb on + strand, within ECD_03269at 3411.155 kb on - strand, within ECD_03269at 3411.155 kb on - strand, within ECD_03269at 3411.216 kb on - strand, within ECD_03269at 3411.417 kb on - strand, within ECD_03269at 3411.451 kb on - strand, within ECD_03269at 3411.451 kb on - strand, within ECD_03269at 3411.451 kb on - strand, within ECD_03269at 3411.461 kb on - strand, within ECD_03269at 3411.461 kb on - strand, within ECD_03269at 3411.552 kb on - strand, within ECD_03269at 3411.732 kb on - strand, within ECD_03269at 3411.742 kb on + strand, within ECD_03269at 3411.742 kb on + strand, within ECD_03269at 3411.743 kb on - strand, within ECD_03269at 3411.834 kb on - strand, within ECD_03269at 3411.890 kb on + strand, within ECD_03269at 3411.891 kb on - strand, within ECD_03269at 3411.950 kb on - strand, within ECD_03269at 3411.983 kb on + strand, within ECD_03269at 3411.984 kb on - strand, within ECD_03269at 3411.984 kb on - strand, within ECD_03269at 3411.984 kb on - strand, within ECD_03269at 3412.137 kb on - strand, within ECD_03269at 3412.137 kb on - strand, within ECD_03269at 3412.217 kb on + strand, within ECD_03269at 3412.271 kb on - strand, within ECD_03269at 3412.275 kb on - strand, within ECD_03269at 3412.349 kb on - strand, within ECD_03269at 3412.487 kb on - strand, within ECD_03269at 3412.487 kb on - strand, within ECD_03269at 3412.507 kb on - strand, within ECD_03269at 3412.507 kb on - strand, within ECD_03269at 3412.579 kb on + strandat 3412.579 kb on + strandat 3412.579 kb on + strandat 3412.580 kb on - strandat 3412.580 kb on - strandat 3412.584 kb on - strandat 3412.584 kb on - strandat 3412.698 kb on + strandat 3412.757 kb on + strandat 3412.769 kb on + strandat 3412.770 kb on - strandat 3412.770 kb on - strandat 3412.770 kb on - strandat 3412.770 kb on - strandat 3412.770 kb on - strandat 3412.813 kb on - strandat 3412.858 kb on - strandat 3412.908 kb on + strandat 3412.908 kb on + strandat 3412.909 kb on - strandat 3412.952 kb on - strandat 3412.974 kb on - strandat 3412.974 kb on - strandat 3412.974 kb on - strandat 3413.116 kb on - strandat 3413.116 kb on - strandat 3413.156 kb on + strandat 3413.156 kb on + strandat 3413.188 kb on + strandat 3413.269 kb on - strandat 3413.314 kb on - strandat 3413.314 kb on - strandat 3413.315 kb on + strandat 3413.315 kb on + strandat 3413.327 kb on - strandat 3413.347 kb on + strandat 3413.347 kb on + strandat 3413.376 kb on + strandat 3413.376 kb on + strandat 3413.380 kb on + strandat 3413.381 kb on - strandat 3413.609 kb on + strandat 3413.610 kb on - strandat 3413.656 kb on - strand, within ECD_03270at 3413.656 kb on - strand, within ECD_03270at 3413.656 kb on - strand, within ECD_03270at 3413.684 kb on + strand, within ECD_03270at 3413.684 kb on + strand, within ECD_03270at 3413.685 kb on - strand, within ECD_03270at 3413.685 kb on - strand, within ECD_03270at 3413.741 kb on - strand, within ECD_03270at 3413.750 kb on + strand, within ECD_03270at 3413.769 kb on - strand, within ECD_03270at 3413.769 kb on - strand, within ECD_03270

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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3,409,402 + ECD_03268 0.54 -1.2
3,409,402 + ECD_03268 0.54 +0.8
3,409,402 + ECD_03268 0.54 -0.1
3,409,402 + ECD_03268 0.54 +0.4
3,409,403 - ECD_03268 0.54 +0.2
3,409,403 - ECD_03268 0.54 -0.1
3,409,465 - ECD_03268 0.57 +1.4
3,409,465 - ECD_03268 0.57 -0.4
3,409,465 - ECD_03268 0.57 +0.4
3,409,465 - ECD_03268 0.57 -0.6
3,409,465 - ECD_03268 0.57 -0.4
3,409,465 - ECD_03268 0.57 +0.5
3,409,579 - ECD_03268 0.62 -0.4
3,409,579 - ECD_03268 0.62 +0.5
3,409,730 - ECD_03268 0.69 -0.4
3,409,730 - ECD_03268 0.69 +0.0
3,409,766 - ECD_03268 0.71 -0.1
3,409,795 + ECD_03268 0.73 -0.6
3,409,913 + ECD_03268 0.78 +0.1
3,409,914 - ECD_03268 0.78 -0.0
3,409,916 - ECD_03268 0.78 -0.4
3,409,916 - ECD_03268 0.78 -0.2
3,409,972 + ECD_03268 0.81 +0.2
3,409,972 + ECD_03268 0.81 +0.0
3,410,068 - ECD_03268 0.86 +0.6
3,410,092 - ECD_03268 0.87 +0.0
3,410,092 - ECD_03268 0.87 -0.2
3,410,092 - ECD_03268 0.87 -0.0
3,410,104 + ECD_03268 0.87 +1.1
3,410,104 + ECD_03268 0.87 +0.3
3,410,104 + ECD_03268 0.87 -1.6
3,410,105 - ECD_03268 0.87 -0.7
3,410,105 - ECD_03268 0.87 -0.2
3,410,105 - ECD_03268 0.87 +0.6
3,410,105 - ECD_03268 0.87 -0.6
3,410,139 - ECD_03268 0.89 -0.5
3,410,139 - ECD_03268 0.89 +0.5
3,410,139 - ECD_03268 0.89 +0.4
3,410,139 - ECD_03268 0.89 -0.1
3,410,139 - ECD_03268 0.89 +0.3
3,410,140 + ECD_03268 0.89 +0.3
3,410,140 + ECD_03268 0.89 -0.2
3,410,141 - ECD_03268 0.89 +0.1
3,410,189 - -0.7
3,410,189 - +0.0
3,410,312 - +0.1
3,410,396 + +0.1
3,410,432 + +1.3
3,410,433 - -0.1
3,410,433 - +0.7
3,410,433 - -1.2
3,410,439 - +0.5
3,410,524 - +0.8
3,410,527 + +0.0
3,410,528 - +0.3
3,410,528 - +0.9
3,410,528 - +0.3
3,410,528 - +1.2
3,410,528 - +0.1
3,410,528 - -0.5
3,410,528 - +0.3
3,410,623 + ECD_03269 0.10 +0.3
3,410,624 - ECD_03269 0.10 +0.5
3,410,628 - ECD_03269 0.11 +0.1
3,410,628 - ECD_03269 0.11 -0.2
3,410,628 - ECD_03269 0.11 -0.7
3,410,650 - ECD_03269 0.11 +0.6
3,410,666 + ECD_03269 0.12 +0.6
3,410,667 - ECD_03269 0.12 +1.1
3,410,667 - ECD_03269 0.12 -0.2
3,410,732 + ECD_03269 0.15 +0.3
3,410,745 - ECD_03269 0.15 -0.6
3,410,811 - ECD_03269 0.18 -0.5
3,410,811 - ECD_03269 0.18 +0.1
3,410,838 - ECD_03269 0.19 -0.5
3,411,032 - ECD_03269 0.27 -0.2
3,411,032 - ECD_03269 0.27 -0.2
3,411,035 - ECD_03269 0.28 +0.3
3,411,113 - ECD_03269 0.31 -0.2
3,411,126 - ECD_03269 0.31 +0.6
3,411,126 - ECD_03269 0.31 -0.3
3,411,126 - ECD_03269 0.31 +0.1
3,411,154 + ECD_03269 0.32 +0.2
3,411,154 + ECD_03269 0.32 -0.7
3,411,155 - ECD_03269 0.33 -0.1
3,411,155 - ECD_03269 0.33 +0.6
3,411,216 - ECD_03269 0.35 -0.2
3,411,417 - ECD_03269 0.43 +1.2
3,411,451 - ECD_03269 0.45 +0.4
3,411,451 - ECD_03269 0.45 +0.6
3,411,451 - ECD_03269 0.45 -0.5
3,411,461 - ECD_03269 0.45 -0.1
3,411,461 - ECD_03269 0.45 +0.2
3,411,552 - ECD_03269 0.49 +0.4
3,411,732 - ECD_03269 0.57 -0.5
3,411,742 + ECD_03269 0.57 -0.1
3,411,742 + ECD_03269 0.57 -0.6
3,411,743 - ECD_03269 0.57 -0.1
3,411,834 - ECD_03269 0.61 -0.7
3,411,890 + ECD_03269 0.63 +0.5
3,411,891 - ECD_03269 0.63 +0.2
3,411,950 - ECD_03269 0.66 +0.6
3,411,983 + ECD_03269 0.67 -1.7
3,411,984 - ECD_03269 0.67 +0.2
3,411,984 - ECD_03269 0.67 +0.2
3,411,984 - ECD_03269 0.67 -0.3
3,412,137 - ECD_03269 0.74 -0.1
3,412,137 - ECD_03269 0.74 +1.5
3,412,217 + ECD_03269 0.77 -1.7
3,412,271 - ECD_03269 0.79 +0.0
3,412,275 - ECD_03269 0.79 +0.1
3,412,349 - ECD_03269 0.82 -0.2
3,412,487 - ECD_03269 0.88 -0.3
3,412,487 - ECD_03269 0.88 -0.6
3,412,507 - ECD_03269 0.89 -0.5
3,412,507 - ECD_03269 0.89 -0.2
3,412,579 + -0.4
3,412,579 + -0.4
3,412,579 + -0.2
3,412,580 - -0.9
3,412,580 - +0.0
3,412,584 - -0.9
3,412,584 - -0.8
3,412,698 + +0.1
3,412,757 + +1.0
3,412,769 + -1.3
3,412,770 - -0.5
3,412,770 - +0.7
3,412,770 - +0.1
3,412,770 - +0.1
3,412,770 - -0.3
3,412,813 - -0.2
3,412,858 - -0.3
3,412,908 + -0.9
3,412,908 + -0.8
3,412,909 - +0.4
3,412,952 - +0.3
3,412,974 - -1.0
3,412,974 - -0.4
3,412,974 - +0.1
3,413,116 - +0.3
3,413,116 - -0.2
3,413,156 + -1.2
3,413,156 + -0.0
3,413,188 + +0.6
3,413,269 - +0.4
3,413,314 - +0.7
3,413,314 - +0.8
3,413,315 + +0.3
3,413,315 + -0.6
3,413,327 - +0.5
3,413,347 + -0.6
3,413,347 + -0.0
3,413,376 + +0.7
3,413,376 + +0.1
3,413,380 + +0.8
3,413,381 - -0.4
3,413,609 + -0.9
3,413,610 - -1.6
3,413,656 - ECD_03270 0.10 -1.4
3,413,656 - ECD_03270 0.10 +2.0
3,413,656 - ECD_03270 0.10 +0.5
3,413,684 + ECD_03270 0.11 +0.6
3,413,684 + ECD_03270 0.11 +0.6
3,413,685 - ECD_03270 0.11 +0.6
3,413,685 - ECD_03270 0.11 +0.5
3,413,741 - ECD_03270 0.13 +0.4
3,413,750 + ECD_03270 0.14 -0.3
3,413,769 - ECD_03270 0.14 +0.4
3,413,769 - ECD_03270 0.14 -0.5

Or see this region's nucleotide sequence