Experiment: Bas33
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03268 and ECD_03269 are separated by 9 nucleotides ECD_03269 and ECD_03270 are separated by 611 nucleotides
ECD_03268: ECD_03268 - 4-alpha-glucanotransferase (amylomaltase), at 3,408,282 to 3,410,366
_03268
ECD_03269: ECD_03269 - maltodextrin phosphorylase, at 3,410,376 to 3,412,769
_03269
ECD_03270: ECD_03270 - mal regulon transcriptional activator, at 3,413,381 to 3,416,086
_03270
Position (kb)
3410
3411
3412
3413 Strain fitness (log2 ratio)
-1
0
1
2 at 3409.402 kb on + strand, within ECD_03268 at 3409.402 kb on + strand, within ECD_03268 at 3409.402 kb on + strand, within ECD_03268 at 3409.402 kb on + strand, within ECD_03268 at 3409.403 kb on - strand, within ECD_03268 at 3409.403 kb on - strand, within ECD_03268 at 3409.465 kb on - strand, within ECD_03268 at 3409.465 kb on - strand, within ECD_03268 at 3409.465 kb on - strand, within ECD_03268 at 3409.465 kb on - strand, within ECD_03268 at 3409.465 kb on - strand, within ECD_03268 at 3409.465 kb on - strand, within ECD_03268 at 3409.579 kb on - strand, within ECD_03268 at 3409.579 kb on - strand, within ECD_03268 at 3409.730 kb on - strand, within ECD_03268 at 3409.730 kb on - strand, within ECD_03268 at 3409.766 kb on - strand, within ECD_03268 at 3409.795 kb on + strand, within ECD_03268 at 3409.913 kb on + strand, within ECD_03268 at 3409.914 kb on - strand, within ECD_03268 at 3409.916 kb on - strand, within ECD_03268 at 3409.916 kb on - strand, within ECD_03268 at 3409.972 kb on + strand, within ECD_03268 at 3409.972 kb on + strand, within ECD_03268 at 3410.068 kb on - strand, within ECD_03268 at 3410.092 kb on - strand, within ECD_03268 at 3410.092 kb on - strand, within ECD_03268 at 3410.092 kb on - strand, within ECD_03268 at 3410.104 kb on + strand, within ECD_03268 at 3410.104 kb on + strand, within ECD_03268 at 3410.104 kb on + strand, within ECD_03268 at 3410.105 kb on - strand, within ECD_03268 at 3410.105 kb on - strand, within ECD_03268 at 3410.105 kb on - strand, within ECD_03268 at 3410.105 kb on - strand, within ECD_03268 at 3410.139 kb on - strand, within ECD_03268 at 3410.139 kb on - strand, within ECD_03268 at 3410.139 kb on - strand, within ECD_03268 at 3410.139 kb on - strand, within ECD_03268 at 3410.139 kb on - strand, within ECD_03268 at 3410.140 kb on + strand, within ECD_03268 at 3410.140 kb on + strand, within ECD_03268 at 3410.141 kb on - strand, within ECD_03268 at 3410.189 kb on - strand at 3410.189 kb on - strand at 3410.312 kb on - strand at 3410.396 kb on + strand at 3410.432 kb on + strand at 3410.433 kb on - strand at 3410.433 kb on - strand at 3410.433 kb on - strand at 3410.439 kb on - strand at 3410.524 kb on - strand at 3410.527 kb on + strand at 3410.528 kb on - strand at 3410.528 kb on - strand at 3410.528 kb on - strand at 3410.528 kb on - strand at 3410.528 kb on - strand at 3410.528 kb on - strand at 3410.528 kb on - strand at 3410.623 kb on + strand, within ECD_03269 at 3410.624 kb on - strand, within ECD_03269 at 3410.628 kb on - strand, within ECD_03269 at 3410.628 kb on - strand, within ECD_03269 at 3410.628 kb on - strand, within ECD_03269 at 3410.650 kb on - strand, within ECD_03269 at 3410.666 kb on + strand, within ECD_03269 at 3410.667 kb on - strand, within ECD_03269 at 3410.667 kb on - strand, within ECD_03269 at 3410.732 kb on + strand, within ECD_03269 at 3410.745 kb on - strand, within ECD_03269 at 3410.811 kb on - strand, within ECD_03269 at 3410.811 kb on - strand, within ECD_03269 at 3410.838 kb on - strand, within ECD_03269 at 3411.032 kb on - strand, within ECD_03269 at 3411.032 kb on - strand, within ECD_03269 at 3411.035 kb on - strand, within ECD_03269 at 3411.113 kb on - strand, within ECD_03269 at 3411.126 kb on - strand, within ECD_03269 at 3411.126 kb on - strand, within ECD_03269 at 3411.126 kb on - strand, within ECD_03269 at 3411.154 kb on + strand, within ECD_03269 at 3411.154 kb on + strand, within ECD_03269 at 3411.155 kb on - strand, within ECD_03269 at 3411.155 kb on - strand, within ECD_03269 at 3411.216 kb on - strand, within ECD_03269 at 3411.417 kb on - strand, within ECD_03269 at 3411.451 kb on - strand, within ECD_03269 at 3411.451 kb on - strand, within ECD_03269 at 3411.451 kb on - strand, within ECD_03269 at 3411.461 kb on - strand, within ECD_03269 at 3411.461 kb on - strand, within ECD_03269 at 3411.552 kb on - strand, within ECD_03269 at 3411.732 kb on - strand, within ECD_03269 at 3411.742 kb on + strand, within ECD_03269 at 3411.742 kb on + strand, within ECD_03269 at 3411.743 kb on - strand, within ECD_03269 at 3411.834 kb on - strand, within ECD_03269 at 3411.890 kb on + strand, within ECD_03269 at 3411.891 kb on - strand, within ECD_03269 at 3411.950 kb on - strand, within ECD_03269 at 3411.983 kb on + strand, within ECD_03269 at 3411.984 kb on - strand, within ECD_03269 at 3411.984 kb on - strand, within ECD_03269 at 3411.984 kb on - strand, within ECD_03269 at 3412.137 kb on - strand, within ECD_03269 at 3412.137 kb on - strand, within ECD_03269 at 3412.217 kb on + strand, within ECD_03269 at 3412.271 kb on - strand, within ECD_03269 at 3412.275 kb on - strand, within ECD_03269 at 3412.349 kb on - strand, within ECD_03269 at 3412.487 kb on - strand, within ECD_03269 at 3412.487 kb on - strand, within ECD_03269 at 3412.507 kb on - strand, within ECD_03269 at 3412.507 kb on - strand, within ECD_03269 at 3412.579 kb on + strand at 3412.579 kb on + strand at 3412.579 kb on + strand at 3412.580 kb on - strand at 3412.580 kb on - strand at 3412.584 kb on - strand at 3412.584 kb on - strand at 3412.698 kb on + strand at 3412.757 kb on + strand at 3412.769 kb on + strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.770 kb on - strand at 3412.813 kb on - strand at 3412.858 kb on - strand at 3412.908 kb on + strand at 3412.908 kb on + strand at 3412.909 kb on - strand at 3412.952 kb on - strand at 3412.974 kb on - strand at 3412.974 kb on - strand at 3412.974 kb on - strand at 3413.116 kb on - strand at 3413.116 kb on - strand at 3413.156 kb on + strand at 3413.156 kb on + strand at 3413.188 kb on + strand at 3413.269 kb on - strand at 3413.314 kb on - strand at 3413.314 kb on - strand at 3413.315 kb on + strand at 3413.315 kb on + strand at 3413.327 kb on - strand at 3413.347 kb on + strand at 3413.347 kb on + strand at 3413.376 kb on + strand at 3413.376 kb on + strand at 3413.380 kb on + strand at 3413.381 kb on - strand at 3413.609 kb on + strand at 3413.610 kb on - strand at 3413.656 kb on - strand, within ECD_03270 at 3413.656 kb on - strand, within ECD_03270 at 3413.656 kb on - strand, within ECD_03270 at 3413.684 kb on + strand, within ECD_03270 at 3413.684 kb on + strand, within ECD_03270 at 3413.685 kb on - strand, within ECD_03270 at 3413.685 kb on - strand, within ECD_03270 at 3413.741 kb on - strand, within ECD_03270 at 3413.750 kb on + strand, within ECD_03270 at 3413.769 kb on - strand, within ECD_03270 at 3413.769 kb on - strand, within ECD_03270
Per-strain Table
Position Strand Gene LocusTag Fraction Bas33 remove 3,409,402 + ECD_03268 0.54 -1.2 3,409,402 + ECD_03268 0.54 +0.8 3,409,402 + ECD_03268 0.54 -0.1 3,409,402 + ECD_03268 0.54 +0.4 3,409,403 - ECD_03268 0.54 +0.2 3,409,403 - ECD_03268 0.54 -0.1 3,409,465 - ECD_03268 0.57 +1.4 3,409,465 - ECD_03268 0.57 -0.4 3,409,465 - ECD_03268 0.57 +0.4 3,409,465 - ECD_03268 0.57 -0.6 3,409,465 - ECD_03268 0.57 -0.4 3,409,465 - ECD_03268 0.57 +0.5 3,409,579 - ECD_03268 0.62 -0.4 3,409,579 - ECD_03268 0.62 +0.5 3,409,730 - ECD_03268 0.69 -0.4 3,409,730 - ECD_03268 0.69 +0.0 3,409,766 - ECD_03268 0.71 -0.1 3,409,795 + ECD_03268 0.73 -0.6 3,409,913 + ECD_03268 0.78 +0.1 3,409,914 - ECD_03268 0.78 -0.0 3,409,916 - ECD_03268 0.78 -0.4 3,409,916 - ECD_03268 0.78 -0.2 3,409,972 + ECD_03268 0.81 +0.2 3,409,972 + ECD_03268 0.81 +0.0 3,410,068 - ECD_03268 0.86 +0.6 3,410,092 - ECD_03268 0.87 +0.0 3,410,092 - ECD_03268 0.87 -0.2 3,410,092 - ECD_03268 0.87 -0.0 3,410,104 + ECD_03268 0.87 +1.1 3,410,104 + ECD_03268 0.87 +0.3 3,410,104 + ECD_03268 0.87 -1.6 3,410,105 - ECD_03268 0.87 -0.7 3,410,105 - ECD_03268 0.87 -0.2 3,410,105 - ECD_03268 0.87 +0.6 3,410,105 - ECD_03268 0.87 -0.6 3,410,139 - ECD_03268 0.89 -0.5 3,410,139 - ECD_03268 0.89 +0.5 3,410,139 - ECD_03268 0.89 +0.4 3,410,139 - ECD_03268 0.89 -0.1 3,410,139 - ECD_03268 0.89 +0.3 3,410,140 + ECD_03268 0.89 +0.3 3,410,140 + ECD_03268 0.89 -0.2 3,410,141 - ECD_03268 0.89 +0.1 3,410,189 - -0.7 3,410,189 - +0.0 3,410,312 - +0.1 3,410,396 + +0.1 3,410,432 + +1.3 3,410,433 - -0.1 3,410,433 - +0.7 3,410,433 - -1.2 3,410,439 - +0.5 3,410,524 - +0.8 3,410,527 + +0.0 3,410,528 - +0.3 3,410,528 - +0.9 3,410,528 - +0.3 3,410,528 - +1.2 3,410,528 - +0.1 3,410,528 - -0.5 3,410,528 - +0.3 3,410,623 + ECD_03269 0.10 +0.3 3,410,624 - ECD_03269 0.10 +0.5 3,410,628 - ECD_03269 0.11 +0.1 3,410,628 - ECD_03269 0.11 -0.2 3,410,628 - ECD_03269 0.11 -0.7 3,410,650 - ECD_03269 0.11 +0.6 3,410,666 + ECD_03269 0.12 +0.6 3,410,667 - ECD_03269 0.12 +1.1 3,410,667 - ECD_03269 0.12 -0.2 3,410,732 + ECD_03269 0.15 +0.3 3,410,745 - ECD_03269 0.15 -0.6 3,410,811 - ECD_03269 0.18 -0.5 3,410,811 - ECD_03269 0.18 +0.1 3,410,838 - ECD_03269 0.19 -0.5 3,411,032 - ECD_03269 0.27 -0.2 3,411,032 - ECD_03269 0.27 -0.2 3,411,035 - ECD_03269 0.28 +0.3 3,411,113 - ECD_03269 0.31 -0.2 3,411,126 - ECD_03269 0.31 +0.6 3,411,126 - ECD_03269 0.31 -0.3 3,411,126 - ECD_03269 0.31 +0.1 3,411,154 + ECD_03269 0.32 +0.2 3,411,154 + ECD_03269 0.32 -0.7 3,411,155 - ECD_03269 0.33 -0.1 3,411,155 - ECD_03269 0.33 +0.6 3,411,216 - ECD_03269 0.35 -0.2 3,411,417 - ECD_03269 0.43 +1.2 3,411,451 - ECD_03269 0.45 +0.4 3,411,451 - ECD_03269 0.45 +0.6 3,411,451 - ECD_03269 0.45 -0.5 3,411,461 - ECD_03269 0.45 -0.1 3,411,461 - ECD_03269 0.45 +0.2 3,411,552 - ECD_03269 0.49 +0.4 3,411,732 - ECD_03269 0.57 -0.5 3,411,742 + ECD_03269 0.57 -0.1 3,411,742 + ECD_03269 0.57 -0.6 3,411,743 - ECD_03269 0.57 -0.1 3,411,834 - ECD_03269 0.61 -0.7 3,411,890 + ECD_03269 0.63 +0.5 3,411,891 - ECD_03269 0.63 +0.2 3,411,950 - ECD_03269 0.66 +0.6 3,411,983 + ECD_03269 0.67 -1.7 3,411,984 - ECD_03269 0.67 +0.2 3,411,984 - ECD_03269 0.67 +0.2 3,411,984 - ECD_03269 0.67 -0.3 3,412,137 - ECD_03269 0.74 -0.1 3,412,137 - ECD_03269 0.74 +1.5 3,412,217 + ECD_03269 0.77 -1.7 3,412,271 - ECD_03269 0.79 +0.0 3,412,275 - ECD_03269 0.79 +0.1 3,412,349 - ECD_03269 0.82 -0.2 3,412,487 - ECD_03269 0.88 -0.3 3,412,487 - ECD_03269 0.88 -0.6 3,412,507 - ECD_03269 0.89 -0.5 3,412,507 - ECD_03269 0.89 -0.2 3,412,579 + -0.4 3,412,579 + -0.4 3,412,579 + -0.2 3,412,580 - -0.9 3,412,580 - +0.0 3,412,584 - -0.9 3,412,584 - -0.8 3,412,698 + +0.1 3,412,757 + +1.0 3,412,769 + -1.3 3,412,770 - -0.5 3,412,770 - +0.7 3,412,770 - +0.1 3,412,770 - +0.1 3,412,770 - -0.3 3,412,813 - -0.2 3,412,858 - -0.3 3,412,908 + -0.9 3,412,908 + -0.8 3,412,909 - +0.4 3,412,952 - +0.3 3,412,974 - -1.0 3,412,974 - -0.4 3,412,974 - +0.1 3,413,116 - +0.3 3,413,116 - -0.2 3,413,156 + -1.2 3,413,156 + -0.0 3,413,188 + +0.6 3,413,269 - +0.4 3,413,314 - +0.7 3,413,314 - +0.8 3,413,315 + +0.3 3,413,315 + -0.6 3,413,327 - +0.5 3,413,347 + -0.6 3,413,347 + -0.0 3,413,376 + +0.7 3,413,376 + +0.1 3,413,380 + +0.8 3,413,381 - -0.4 3,413,609 + -0.9 3,413,610 - -1.6 3,413,656 - ECD_03270 0.10 -1.4 3,413,656 - ECD_03270 0.10 +2.0 3,413,656 - ECD_03270 0.10 +0.5 3,413,684 + ECD_03270 0.11 +0.6 3,413,684 + ECD_03270 0.11 +0.6 3,413,685 - ECD_03270 0.11 +0.6 3,413,685 - ECD_03270 0.11 +0.5 3,413,741 - ECD_03270 0.13 +0.4 3,413,750 + ECD_03270 0.14 -0.3 3,413,769 - ECD_03270 0.14 +0.4 3,413,769 - ECD_03270 0.14 -0.5
Or see this region's nucleotide sequence