Experiment: Bas33
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03264 and ECD_03265 are separated by 37 nucleotides ECD_03265 and ECD_03266 are separated by 58 nucleotides ECD_03266 and ECD_03267 are separated by 360 nucleotides
ECD_03264: ECD_03264 - pimeloyl-ACP methyl ester carboxylesterase, at 3,404,435 to 3,405,205
_03264
ECD_03265: ECD_03265 - DNA catabolic protein, at 3,405,243 to 3,405,926
_03265
ECD_03266: ECD_03266 - Fe/S biogenesis protein, putative scaffold/chaperone protein, at 3,405,985 to 3,406,560
_03266
ECD_03267: ECD_03267 - gluconate transporter, high-affinity GNT I system, at 3,406,921 to 3,408,237
_03267
Position (kb)
3405
3406
3407 Strain fitness (log2 ratio)
-2
-1
0
1 at 3405.086 kb on - strand, within ECD_03264 at 3405.097 kb on + strand, within ECD_03264 at 3405.097 kb on + strand, within ECD_03264 at 3405.098 kb on - strand, within ECD_03264 at 3405.098 kb on - strand, within ECD_03264 at 3405.199 kb on + strand at 3405.200 kb on - strand at 3405.200 kb on - strand at 3405.210 kb on + strand at 3405.229 kb on - strand at 3405.242 kb on + strand at 3405.242 kb on + strand at 3405.242 kb on + strand at 3405.243 kb on - strand at 3405.243 kb on - strand at 3405.243 kb on - strand at 3405.243 kb on - strand at 3405.243 kb on - strand at 3405.247 kb on + strand at 3405.248 kb on - strand at 3405.263 kb on - strand at 3405.292 kb on + strand at 3405.464 kb on - strand, within ECD_03265 at 3405.532 kb on + strand, within ECD_03265 at 3405.532 kb on + strand, within ECD_03265 at 3405.533 kb on - strand, within ECD_03265 at 3405.533 kb on - strand, within ECD_03265 at 3405.636 kb on - strand, within ECD_03265 at 3405.636 kb on - strand, within ECD_03265 at 3405.710 kb on + strand, within ECD_03265 at 3405.809 kb on + strand, within ECD_03265 at 3405.809 kb on + strand, within ECD_03265 at 3405.846 kb on - strand, within ECD_03265 at 3405.874 kb on + strand at 3405.874 kb on + strand at 3405.875 kb on - strand at 3405.875 kb on - strand at 3405.924 kb on + strand at 3405.925 kb on - strand at 3405.925 kb on - strand at 3405.945 kb on - strand at 3405.950 kb on - strand at 3405.957 kb on + strand at 3405.958 kb on - strand at 3405.993 kb on + strand at 3405.993 kb on + strand at 3406.112 kb on - strand, within ECD_03266 at 3406.112 kb on - strand, within ECD_03266 at 3406.174 kb on + strand, within ECD_03266 at 3406.187 kb on + strand, within ECD_03266 at 3406.188 kb on - strand, within ECD_03266 at 3406.188 kb on - strand, within ECD_03266 at 3406.198 kb on + strand, within ECD_03266 at 3406.198 kb on + strand, within ECD_03266 at 3406.282 kb on - strand, within ECD_03266 at 3406.321 kb on + strand, within ECD_03266 at 3406.322 kb on - strand, within ECD_03266 at 3406.322 kb on - strand, within ECD_03266 at 3406.322 kb on - strand, within ECD_03266 at 3406.323 kb on + strand, within ECD_03266 at 3406.323 kb on + strand, within ECD_03266 at 3406.323 kb on + strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.324 kb on - strand, within ECD_03266 at 3406.552 kb on + strand at 3406.552 kb on + strand at 3406.553 kb on - strand at 3406.553 kb on - strand at 3406.556 kb on - strand at 3406.556 kb on - strand at 3406.558 kb on + strand at 3406.558 kb on + strand at 3406.558 kb on + strand at 3406.559 kb on - strand at 3406.564 kb on - strand at 3406.577 kb on + strand at 3406.577 kb on + strand at 3406.597 kb on + strand at 3406.598 kb on - strand at 3406.617 kb on - strand at 3406.689 kb on - strand at 3406.689 kb on - strand at 3406.802 kb on - strand at 3406.839 kb on - strand at 3406.949 kb on + strand at 3407.052 kb on + strand at 3407.225 kb on + strand, within ECD_03267 at 3407.238 kb on + strand, within ECD_03267 at 3407.260 kb on + strand, within ECD_03267 at 3407.260 kb on + strand, within ECD_03267 at 3407.261 kb on - strand, within ECD_03267 at 3407.332 kb on + strand, within ECD_03267 at 3407.332 kb on + strand, within ECD_03267 at 3407.333 kb on - strand, within ECD_03267 at 3407.333 kb on - strand, within ECD_03267 at 3407.333 kb on - strand, within ECD_03267 at 3407.342 kb on + strand, within ECD_03267 at 3407.343 kb on - strand, within ECD_03267 at 3407.343 kb on - strand, within ECD_03267 at 3407.437 kb on - strand, within ECD_03267 at 3407.450 kb on - strand, within ECD_03267 at 3407.457 kb on + strand, within ECD_03267 at 3407.458 kb on - strand, within ECD_03267
Per-strain Table
Position Strand Gene LocusTag Fraction Bas33 remove 3,405,086 - ECD_03264 0.84 +0.3 3,405,097 + ECD_03264 0.86 +1.1 3,405,097 + ECD_03264 0.86 -0.0 3,405,098 - ECD_03264 0.86 -0.5 3,405,098 - ECD_03264 0.86 -0.3 3,405,199 + -0.6 3,405,200 - +0.4 3,405,200 - +0.7 3,405,210 + -0.5 3,405,229 - +0.1 3,405,242 + +0.1 3,405,242 + -0.1 3,405,242 + -0.0 3,405,243 - -1.1 3,405,243 - +0.2 3,405,243 - -0.6 3,405,243 - +0.0 3,405,243 - -1.2 3,405,247 + +0.2 3,405,248 - +0.5 3,405,263 - +0.0 3,405,292 + -0.4 3,405,464 - ECD_03265 0.32 -0.6 3,405,532 + ECD_03265 0.42 +0.3 3,405,532 + ECD_03265 0.42 +0.6 3,405,533 - ECD_03265 0.42 -1.0 3,405,533 - ECD_03265 0.42 -0.0 3,405,636 - ECD_03265 0.57 +0.5 3,405,636 - ECD_03265 0.57 +0.6 3,405,710 + ECD_03265 0.68 +0.3 3,405,809 + ECD_03265 0.83 +0.9 3,405,809 + ECD_03265 0.83 -0.2 3,405,846 - ECD_03265 0.88 +0.0 3,405,874 + -0.4 3,405,874 + -0.3 3,405,875 - +0.5 3,405,875 - +0.3 3,405,924 + -0.0 3,405,925 - +0.3 3,405,925 - -0.3 3,405,945 - +1.0 3,405,950 - -1.1 3,405,957 + -1.4 3,405,958 - -1.0 3,405,993 + -1.2 3,405,993 + -0.2 3,406,112 - ECD_03266 0.22 -0.2 3,406,112 - ECD_03266 0.22 -1.6 3,406,174 + ECD_03266 0.33 -0.5 3,406,187 + ECD_03266 0.35 -2.7 3,406,188 - ECD_03266 0.35 +1.0 3,406,188 - ECD_03266 0.35 -1.1 3,406,198 + ECD_03266 0.37 -0.9 3,406,198 + ECD_03266 0.37 -0.6 3,406,282 - ECD_03266 0.52 -0.4 3,406,321 + ECD_03266 0.58 -1.5 3,406,322 - ECD_03266 0.59 -0.2 3,406,322 - ECD_03266 0.59 -0.2 3,406,322 - ECD_03266 0.59 -0.9 3,406,323 + ECD_03266 0.59 -1.3 3,406,323 + ECD_03266 0.59 +0.2 3,406,323 + ECD_03266 0.59 -0.6 3,406,324 - ECD_03266 0.59 -0.7 3,406,324 - ECD_03266 0.59 +0.3 3,406,324 - ECD_03266 0.59 -1.0 3,406,324 - ECD_03266 0.59 +0.4 3,406,552 + -0.3 3,406,552 + -0.7 3,406,553 - +1.7 3,406,553 - -1.1 3,406,556 - -0.3 3,406,556 - +0.8 3,406,558 + +0.1 3,406,558 + -0.3 3,406,558 + +0.6 3,406,559 - -0.6 3,406,564 - +0.2 3,406,577 + +0.5 3,406,577 + +0.2 3,406,597 + -0.6 3,406,598 - +0.2 3,406,617 - -0.1 3,406,689 - -1.0 3,406,689 - -0.1 3,406,802 - -0.2 3,406,839 - +0.7 3,406,949 + +0.0 3,407,052 + +0.8 3,407,225 + ECD_03267 0.23 +0.3 3,407,238 + ECD_03267 0.24 -0.3 3,407,260 + ECD_03267 0.26 +1.1 3,407,260 + ECD_03267 0.26 +0.4 3,407,261 - ECD_03267 0.26 +0.1 3,407,332 + ECD_03267 0.31 +0.4 3,407,332 + ECD_03267 0.31 +0.8 3,407,333 - ECD_03267 0.31 +1.5 3,407,333 - ECD_03267 0.31 -0.6 3,407,333 - ECD_03267 0.31 -0.8 3,407,342 + ECD_03267 0.32 -0.3 3,407,343 - ECD_03267 0.32 +0.4 3,407,343 - ECD_03267 0.32 +0.2 3,407,437 - ECD_03267 0.39 +1.2 3,407,450 - ECD_03267 0.40 +0.5 3,407,457 + ECD_03267 0.41 -0.1 3,407,458 - ECD_03267 0.41 -1.9
Or see this region's nucleotide sequence