Strain Fitness in Escherichia coli BL21 around ECD_03266

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03264 and ECD_03265 are separated by 37 nucleotidesECD_03265 and ECD_03266 are separated by 58 nucleotidesECD_03266 and ECD_03267 are separated by 360 nucleotides ECD_03264: ECD_03264 - pimeloyl-ACP methyl ester carboxylesterase, at 3,404,435 to 3,405,205 _03264 ECD_03265: ECD_03265 - DNA catabolic protein, at 3,405,243 to 3,405,926 _03265 ECD_03266: ECD_03266 - Fe/S biogenesis protein, putative scaffold/chaperone protein, at 3,405,985 to 3,406,560 _03266 ECD_03267: ECD_03267 - gluconate transporter, high-affinity GNT I system, at 3,406,921 to 3,408,237 _03267 Position (kb) 3405 3406 3407Strain fitness (log2 ratio) -2 -1 0 1at 3405.086 kb on - strand, within ECD_03264at 3405.097 kb on + strand, within ECD_03264at 3405.097 kb on + strand, within ECD_03264at 3405.098 kb on - strand, within ECD_03264at 3405.098 kb on - strand, within ECD_03264at 3405.199 kb on + strandat 3405.200 kb on - strandat 3405.200 kb on - strandat 3405.210 kb on + strandat 3405.229 kb on - strandat 3405.242 kb on + strandat 3405.242 kb on + strandat 3405.242 kb on + strandat 3405.243 kb on - strandat 3405.243 kb on - strandat 3405.243 kb on - strandat 3405.243 kb on - strandat 3405.243 kb on - strandat 3405.247 kb on + strandat 3405.248 kb on - strandat 3405.263 kb on - strandat 3405.292 kb on + strandat 3405.464 kb on - strand, within ECD_03265at 3405.532 kb on + strand, within ECD_03265at 3405.532 kb on + strand, within ECD_03265at 3405.533 kb on - strand, within ECD_03265at 3405.533 kb on - strand, within ECD_03265at 3405.636 kb on - strand, within ECD_03265at 3405.636 kb on - strand, within ECD_03265at 3405.710 kb on + strand, within ECD_03265at 3405.809 kb on + strand, within ECD_03265at 3405.809 kb on + strand, within ECD_03265at 3405.846 kb on - strand, within ECD_03265at 3405.874 kb on + strandat 3405.874 kb on + strandat 3405.875 kb on - strandat 3405.875 kb on - strandat 3405.924 kb on + strandat 3405.925 kb on - strandat 3405.925 kb on - strandat 3405.945 kb on - strandat 3405.950 kb on - strandat 3405.957 kb on + strandat 3405.958 kb on - strandat 3405.993 kb on + strandat 3405.993 kb on + strandat 3406.112 kb on - strand, within ECD_03266at 3406.112 kb on - strand, within ECD_03266at 3406.174 kb on + strand, within ECD_03266at 3406.187 kb on + strand, within ECD_03266at 3406.188 kb on - strand, within ECD_03266at 3406.188 kb on - strand, within ECD_03266at 3406.198 kb on + strand, within ECD_03266at 3406.198 kb on + strand, within ECD_03266at 3406.282 kb on - strand, within ECD_03266at 3406.321 kb on + strand, within ECD_03266at 3406.322 kb on - strand, within ECD_03266at 3406.322 kb on - strand, within ECD_03266at 3406.322 kb on - strand, within ECD_03266at 3406.323 kb on + strand, within ECD_03266at 3406.323 kb on + strand, within ECD_03266at 3406.323 kb on + strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.552 kb on + strandat 3406.552 kb on + strandat 3406.553 kb on - strandat 3406.553 kb on - strandat 3406.556 kb on - strandat 3406.556 kb on - strandat 3406.558 kb on + strandat 3406.558 kb on + strandat 3406.558 kb on + strandat 3406.559 kb on - strandat 3406.564 kb on - strandat 3406.577 kb on + strandat 3406.577 kb on + strandat 3406.597 kb on + strandat 3406.598 kb on - strandat 3406.617 kb on - strandat 3406.689 kb on - strandat 3406.689 kb on - strandat 3406.802 kb on - strandat 3406.839 kb on - strandat 3406.949 kb on + strandat 3407.052 kb on + strandat 3407.225 kb on + strand, within ECD_03267at 3407.238 kb on + strand, within ECD_03267at 3407.260 kb on + strand, within ECD_03267at 3407.260 kb on + strand, within ECD_03267at 3407.261 kb on - strand, within ECD_03267at 3407.332 kb on + strand, within ECD_03267at 3407.332 kb on + strand, within ECD_03267at 3407.333 kb on - strand, within ECD_03267at 3407.333 kb on - strand, within ECD_03267at 3407.333 kb on - strand, within ECD_03267at 3407.342 kb on + strand, within ECD_03267at 3407.343 kb on - strand, within ECD_03267at 3407.343 kb on - strand, within ECD_03267at 3407.437 kb on - strand, within ECD_03267at 3407.450 kb on - strand, within ECD_03267at 3407.457 kb on + strand, within ECD_03267at 3407.458 kb on - strand, within ECD_03267

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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3,405,086 - ECD_03264 0.84 +0.3
3,405,097 + ECD_03264 0.86 +1.1
3,405,097 + ECD_03264 0.86 -0.0
3,405,098 - ECD_03264 0.86 -0.5
3,405,098 - ECD_03264 0.86 -0.3
3,405,199 + -0.6
3,405,200 - +0.4
3,405,200 - +0.7
3,405,210 + -0.5
3,405,229 - +0.1
3,405,242 + +0.1
3,405,242 + -0.1
3,405,242 + -0.0
3,405,243 - -1.1
3,405,243 - +0.2
3,405,243 - -0.6
3,405,243 - +0.0
3,405,243 - -1.2
3,405,247 + +0.2
3,405,248 - +0.5
3,405,263 - +0.0
3,405,292 + -0.4
3,405,464 - ECD_03265 0.32 -0.6
3,405,532 + ECD_03265 0.42 +0.3
3,405,532 + ECD_03265 0.42 +0.6
3,405,533 - ECD_03265 0.42 -1.0
3,405,533 - ECD_03265 0.42 -0.0
3,405,636 - ECD_03265 0.57 +0.5
3,405,636 - ECD_03265 0.57 +0.6
3,405,710 + ECD_03265 0.68 +0.3
3,405,809 + ECD_03265 0.83 +0.9
3,405,809 + ECD_03265 0.83 -0.2
3,405,846 - ECD_03265 0.88 +0.0
3,405,874 + -0.4
3,405,874 + -0.3
3,405,875 - +0.5
3,405,875 - +0.3
3,405,924 + -0.0
3,405,925 - +0.3
3,405,925 - -0.3
3,405,945 - +1.0
3,405,950 - -1.1
3,405,957 + -1.4
3,405,958 - -1.0
3,405,993 + -1.2
3,405,993 + -0.2
3,406,112 - ECD_03266 0.22 -0.2
3,406,112 - ECD_03266 0.22 -1.6
3,406,174 + ECD_03266 0.33 -0.5
3,406,187 + ECD_03266 0.35 -2.7
3,406,188 - ECD_03266 0.35 +1.0
3,406,188 - ECD_03266 0.35 -1.1
3,406,198 + ECD_03266 0.37 -0.9
3,406,198 + ECD_03266 0.37 -0.6
3,406,282 - ECD_03266 0.52 -0.4
3,406,321 + ECD_03266 0.58 -1.5
3,406,322 - ECD_03266 0.59 -0.2
3,406,322 - ECD_03266 0.59 -0.2
3,406,322 - ECD_03266 0.59 -0.9
3,406,323 + ECD_03266 0.59 -1.3
3,406,323 + ECD_03266 0.59 +0.2
3,406,323 + ECD_03266 0.59 -0.6
3,406,324 - ECD_03266 0.59 -0.7
3,406,324 - ECD_03266 0.59 +0.3
3,406,324 - ECD_03266 0.59 -1.0
3,406,324 - ECD_03266 0.59 +0.4
3,406,552 + -0.3
3,406,552 + -0.7
3,406,553 - +1.7
3,406,553 - -1.1
3,406,556 - -0.3
3,406,556 - +0.8
3,406,558 + +0.1
3,406,558 + -0.3
3,406,558 + +0.6
3,406,559 - -0.6
3,406,564 - +0.2
3,406,577 + +0.5
3,406,577 + +0.2
3,406,597 + -0.6
3,406,598 - +0.2
3,406,617 - -0.1
3,406,689 - -1.0
3,406,689 - -0.1
3,406,802 - -0.2
3,406,839 - +0.7
3,406,949 + +0.0
3,407,052 + +0.8
3,407,225 + ECD_03267 0.23 +0.3
3,407,238 + ECD_03267 0.24 -0.3
3,407,260 + ECD_03267 0.26 +1.1
3,407,260 + ECD_03267 0.26 +0.4
3,407,261 - ECD_03267 0.26 +0.1
3,407,332 + ECD_03267 0.31 +0.4
3,407,332 + ECD_03267 0.31 +0.8
3,407,333 - ECD_03267 0.31 +1.5
3,407,333 - ECD_03267 0.31 -0.6
3,407,333 - ECD_03267 0.31 -0.8
3,407,342 + ECD_03267 0.32 -0.3
3,407,343 - ECD_03267 0.32 +0.4
3,407,343 - ECD_03267 0.32 +0.2
3,407,437 - ECD_03267 0.39 +1.2
3,407,450 - ECD_03267 0.40 +0.5
3,407,457 + ECD_03267 0.41 -0.1
3,407,458 - ECD_03267 0.41 -1.9

Or see this region's nucleotide sequence