Strain Fitness in Escherichia coli BL21 around ECD_02302

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02301 and ECD_02302 are separated by 335 nucleotidesECD_02302 and ECD_02303 are separated by 49 nucleotides ECD_02301: ECD_02301 - manganese/divalent cation transporter, at 2,389,354 to 2,390,592 _02301 ECD_02302: ECD_02302 - nucleoside (except guanosine) transporter, at 2,390,928 to 2,392,130 _02302 ECD_02303: ECD_02303 - putative diguanylate cyclase, at 2,392,180 to 2,394,369 _02303 Position (kb) 2390 2391 2392 2393Strain fitness (log2 ratio) -2 -1 0 1at 2389.953 kb on - strand, within ECD_02301at 2390.091 kb on - strand, within ECD_02301at 2390.568 kb on + strandat 2390.568 kb on + strandat 2390.604 kb on - strandat 2390.664 kb on + strandat 2390.701 kb on + strandat 2390.707 kb on + strandat 2390.790 kb on - strandat 2390.883 kb on + strandat 2390.883 kb on + strandat 2390.928 kb on - strandat 2391.389 kb on + strand, within ECD_02302at 2391.422 kb on + strand, within ECD_02302at 2391.461 kb on + strand, within ECD_02302at 2391.461 kb on + strand, within ECD_02302at 2391.461 kb on + strand, within ECD_02302at 2391.461 kb on + strand, within ECD_02302at 2391.461 kb on + strand, within ECD_02302at 2391.480 kb on + strand, within ECD_02302at 2391.480 kb on + strand, within ECD_02302at 2391.480 kb on + strand, within ECD_02302at 2391.481 kb on - strand, within ECD_02302at 2391.652 kb on - strand, within ECD_02302at 2391.795 kb on + strand, within ECD_02302at 2391.860 kb on + strand, within ECD_02302at 2392.040 kb on + strandat 2392.137 kb on - strandat 2392.137 kb on - strandat 2392.137 kb on - strandat 2392.137 kb on - strandat 2392.137 kb on - strandat 2392.137 kb on - strandat 2392.215 kb on - strandat 2392.215 kb on - strandat 2392.321 kb on - strandat 2392.477 kb on - strand, within ECD_02303at 2392.497 kb on - strand, within ECD_02303at 2392.891 kb on - strand, within ECD_02303at 2392.891 kb on - strand, within ECD_02303

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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2,389,953 - ECD_02301 0.48 -1.8
2,390,091 - ECD_02301 0.59 -0.4
2,390,568 + -0.9
2,390,568 + +0.7
2,390,604 - -0.4
2,390,664 + +0.1
2,390,701 + +0.1
2,390,707 + +0.1
2,390,790 - -0.0
2,390,883 + +0.4
2,390,883 + +0.6
2,390,928 - +0.4
2,391,389 + ECD_02302 0.38 -1.2
2,391,422 + ECD_02302 0.41 +0.5
2,391,461 + ECD_02302 0.44 -0.0
2,391,461 + ECD_02302 0.44 +0.2
2,391,461 + ECD_02302 0.44 -0.8
2,391,461 + ECD_02302 0.44 -0.6
2,391,461 + ECD_02302 0.44 -1.1
2,391,480 + ECD_02302 0.46 -1.1
2,391,480 + ECD_02302 0.46 +0.4
2,391,480 + ECD_02302 0.46 -1.8
2,391,481 - ECD_02302 0.46 -0.8
2,391,652 - ECD_02302 0.60 -1.6
2,391,795 + ECD_02302 0.72 +1.2
2,391,860 + ECD_02302 0.77 -1.6
2,392,040 + +1.1
2,392,137 - +1.5
2,392,137 - -1.2
2,392,137 - +0.5
2,392,137 - +1.1
2,392,137 - +1.5
2,392,137 - +0.4
2,392,215 - -0.2
2,392,215 - +0.1
2,392,321 - +0.2
2,392,477 - ECD_02303 0.14 -0.1
2,392,497 - ECD_02303 0.14 +0.1
2,392,891 - ECD_02303 0.32 +0.1
2,392,891 - ECD_02303 0.32 +0.1

Or see this region's nucleotide sequence