Experiment: Bas33
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00923 and ECD_00924 overlap by 24 nucleotides ECD_00924 and ECD_00925 are separated by 135 nucleotides ECD_00925 and ECD_00926 overlap by 4 nucleotides
ECD_00923: ECD_00923 - protein kinase-like domain protein, at 976,842 to 977,735
_00923
ECD_00924: ECD_00924 - envelope biogenesis factor; DUF218 superfamily protein, at 977,712 to 978,491
_00924
ECD_00925: ECD_00925 - putative S-adenosyl-L-methionine-dependent methyltransferase, at 978,627 to 979,412
_00925
ECD_00926: ECD_00926 - chromosome condensin MukBEF, kleisin-like subunit, binds calcium, at 979,409 to 980,731
_00926
Position (kb) 978
979
980 Strain fitness (log2 ratio) -2
-1
0
1 at 977.634 kb on + strand, within ECD_00923 at 978.183 kb on - strand, within ECD_00924 at 978.516 kb on + strand at 978.516 kb on + strand at 978.518 kb on + strand at 978.518 kb on + strand at 978.518 kb on + strand at 978.519 kb on - strand at 978.538 kb on + strand at 978.538 kb on + strand at 978.541 kb on + strand at 978.541 kb on + strand at 978.541 kb on + strand at 978.919 kb on + strand, within ECD_00925 at 979.018 kb on + strand, within ECD_00925 at 979.266 kb on + strand, within ECD_00925 at 979.347 kb on + strand at 979.347 kb on + strand at 979.349 kb on + strand at 979.352 kb on + strand at 979.367 kb on + strand at 979.367 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas33 remove 977,634 + ECD_00923 0.89 +0.1 978,183 - ECD_00924 0.60 +1.2 978,516 + +0.5 978,516 + +0.4 978,518 + +0.1 978,518 + -0.1 978,518 + -0.8 978,519 - +0.8 978,538 + -0.1 978,538 + -0.6 978,541 + -0.5 978,541 + -0.9 978,541 + +0.1 978,919 + ECD_00925 0.37 -2.6 979,018 + ECD_00925 0.50 -0.1 979,266 + ECD_00925 0.81 -0.9 979,347 + +0.1 979,347 + +0.6 979,349 + -0.1 979,352 + -0.8 979,367 + -0.4 979,367 + +0.2
Or see this region's nucleotide sequence