Strain Fitness in Escherichia coli BL21 around ECD_00883

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00882 and ECD_00883 are separated by 114 nucleotidesECD_00883 and ECD_00884 overlap by 4 nucleotides ECD_00882: ECD_00882 - DUF535 family protein, at 922,831 to 923,823 _00882 ECD_00883: ECD_00883 - macrolide transporter membrane fusion protein (MFP) component, at 923,938 to 925,053 _00883 ECD_00884: ECD_00884 - macrolide ABC transporter peremase/ATPase, at 925,050 to 926,996 _00884 Position (kb) 923 924 925 926Strain fitness (log2 ratio) -1 0 1at 922.943 kb on - strand, within ECD_00882at 922.943 kb on - strand, within ECD_00882at 923.156 kb on - strand, within ECD_00882at 923.429 kb on - strand, within ECD_00882at 923.451 kb on + strand, within ECD_00882at 923.451 kb on + strand, within ECD_00882at 923.483 kb on - strand, within ECD_00882at 923.483 kb on - strand, within ECD_00882at 923.573 kb on - strand, within ECD_00882at 923.573 kb on - strand, within ECD_00882at 923.632 kb on - strand, within ECD_00882at 923.716 kb on - strand, within ECD_00882at 923.771 kb on - strandat 923.782 kb on - strandat 923.802 kb on + strandat 923.802 kb on + strandat 923.803 kb on - strandat 923.803 kb on - strandat 923.803 kb on - strandat 923.856 kb on + strandat 923.987 kb on + strandat 924.006 kb on + strandat 924.725 kb on + strand, within ECD_00883at 924.763 kb on + strand, within ECD_00883at 924.810 kb on + strand, within ECD_00883at 924.906 kb on + strand, within ECD_00883at 924.924 kb on + strand, within ECD_00883at 924.924 kb on + strand, within ECD_00883at 924.924 kb on + strand, within ECD_00883at 924.967 kb on - strandat 925.079 kb on + strandat 925.143 kb on + strandat 925.387 kb on - strand, within ECD_00884at 925.468 kb on - strand, within ECD_00884at 925.468 kb on - strand, within ECD_00884at 925.635 kb on - strand, within ECD_00884at 925.868 kb on - strand, within ECD_00884at 925.967 kb on + strand, within ECD_00884at 925.967 kb on + strand, within ECD_00884at 925.982 kb on + strand, within ECD_00884at 925.983 kb on - strand, within ECD_00884at 926.028 kb on + strand, within ECD_00884at 926.046 kb on + strand, within ECD_00884

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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922,943 - ECD_00882 0.11 -0.6
922,943 - ECD_00882 0.11 +0.1
923,156 - ECD_00882 0.33 -0.0
923,429 - ECD_00882 0.60 +0.4
923,451 + ECD_00882 0.62 -0.8
923,451 + ECD_00882 0.62 +0.4
923,483 - ECD_00882 0.66 -0.6
923,483 - ECD_00882 0.66 -0.3
923,573 - ECD_00882 0.75 -0.1
923,573 - ECD_00882 0.75 -0.3
923,632 - ECD_00882 0.81 -0.4
923,716 - ECD_00882 0.89 +0.2
923,771 - -0.1
923,782 - -0.8
923,802 + +0.2
923,802 + +0.3
923,803 - -0.4
923,803 - -0.1
923,803 - +0.1
923,856 + -0.1
923,987 + -1.4
924,006 + -1.3
924,725 + ECD_00883 0.71 -0.7
924,763 + ECD_00883 0.74 -0.7
924,810 + ECD_00883 0.78 -0.4
924,906 + ECD_00883 0.87 -0.7
924,924 + ECD_00883 0.88 +0.6
924,924 + ECD_00883 0.88 -0.7
924,924 + ECD_00883 0.88 -0.9
924,967 - +0.4
925,079 + +0.6
925,143 + +0.1
925,387 - ECD_00884 0.17 +0.6
925,468 - ECD_00884 0.21 +0.3
925,468 - ECD_00884 0.21 +0.1
925,635 - ECD_00884 0.30 -0.3
925,868 - ECD_00884 0.42 -0.2
925,967 + ECD_00884 0.47 +0.1
925,967 + ECD_00884 0.47 -1.3
925,982 + ECD_00884 0.48 -0.4
925,983 - ECD_00884 0.48 +0.3
926,028 + ECD_00884 0.50 -0.0
926,046 + ECD_00884 0.51 -0.7

Or see this region's nucleotide sequence