Strain Fitness in Escherichia coli BL21 around ECD_00670

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00669 and ECD_00670 are separated by 270 nucleotidesECD_00670 and ECD_00671 are separated by 22 nucleotidesECD_00671 and ECD_00672 overlap by 7 nucleotides ECD_00669: ECD_00669 - dipeptide and tripeptide permease D, at 699,639 to 701,120 _00669 ECD_00670: ECD_00670 - NIF3 family metal-binding protein, at 701,391 to 702,134 _00670 ECD_00671: ECD_00671 - putative allophanate hydrolase, subunit 1, at 702,157 to 702,813 _00671 ECD_00672: ECD_00672 - putative allophanate hydrolase, subunit 2, at 702,807 to 703,739 _00672 Position (kb) 701 702 703Strain fitness (log2 ratio) -2 -1 0 1at 700.401 kb on + strand, within ECD_00669at 700.539 kb on - strand, within ECD_00669at 700.664 kb on + strand, within ECD_00669at 700.667 kb on + strand, within ECD_00669at 700.667 kb on + strand, within ECD_00669at 700.668 kb on - strand, within ECD_00669at 700.690 kb on + strand, within ECD_00669at 700.691 kb on - strand, within ECD_00669at 700.691 kb on - strand, within ECD_00669at 700.691 kb on - strand, within ECD_00669at 700.691 kb on - strand, within ECD_00669at 700.769 kb on + strand, within ECD_00669at 700.794 kb on - strand, within ECD_00669at 700.811 kb on - strand, within ECD_00669at 700.945 kb on + strand, within ECD_00669at 700.945 kb on + strand, within ECD_00669at 700.946 kb on - strand, within ECD_00669at 700.960 kb on + strand, within ECD_00669at 700.971 kb on + strand, within ECD_00669at 700.989 kb on - strandat 700.989 kb on - strandat 701.001 kb on + strandat 701.086 kb on + strandat 701.151 kb on + strandat 701.308 kb on + strandat 701.351 kb on - strandat 701.363 kb on + strandat 701.364 kb on - strandat 701.447 kb on + strandat 701.586 kb on + strand, within ECD_00670at 701.638 kb on + strand, within ECD_00670at 701.846 kb on + strand, within ECD_00670at 701.847 kb on - strand, within ECD_00670at 702.021 kb on + strand, within ECD_00670at 702.593 kb on + strand, within ECD_00671at 702.593 kb on + strand, within ECD_00671at 702.593 kb on + strand, within ECD_00671at 702.593 kb on + strand, within ECD_00671at 702.594 kb on - strand, within ECD_00671at 702.623 kb on + strand, within ECD_00671at 702.758 kb on + strandat 702.758 kb on + strandat 702.758 kb on + strandat 702.758 kb on + strandat 702.761 kb on + strandat 702.788 kb on + strandat 702.834 kb on + strandat 702.834 kb on + strandat 702.834 kb on + strandat 702.834 kb on + strandat 702.834 kb on + strandat 702.834 kb on + strandat 702.835 kb on - strandat 702.835 kb on - strandat 702.836 kb on + strandat 703.055 kb on + strand, within ECD_00672at 703.055 kb on + strand, within ECD_00672at 703.112 kb on + strand, within ECD_00672

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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700,401 + ECD_00669 0.51 +0.6
700,539 - ECD_00669 0.61 -1.3
700,664 + ECD_00669 0.69 +0.1
700,667 + ECD_00669 0.69 -0.8
700,667 + ECD_00669 0.69 -0.6
700,668 - ECD_00669 0.69 +0.0
700,690 + ECD_00669 0.71 -0.2
700,691 - ECD_00669 0.71 -0.2
700,691 - ECD_00669 0.71 -0.2
700,691 - ECD_00669 0.71 +0.3
700,691 - ECD_00669 0.71 -0.6
700,769 + ECD_00669 0.76 -2.4
700,794 - ECD_00669 0.78 +0.6
700,811 - ECD_00669 0.79 +0.0
700,945 + ECD_00669 0.88 -0.9
700,945 + ECD_00669 0.88 -0.4
700,946 - ECD_00669 0.88 -0.1
700,960 + ECD_00669 0.89 -1.4
700,971 + ECD_00669 0.90 +0.2
700,989 - +0.6
700,989 - -0.2
701,001 + +1.0
701,086 + -0.1
701,151 + -0.0
701,308 + +0.1
701,351 - +1.1
701,363 + -0.2
701,364 - -0.4
701,447 + -0.4
701,586 + ECD_00670 0.26 -0.6
701,638 + ECD_00670 0.33 +0.5
701,846 + ECD_00670 0.61 -0.5
701,847 - ECD_00670 0.61 -0.7
702,021 + ECD_00670 0.85 -1.1
702,593 + ECD_00671 0.66 -0.2
702,593 + ECD_00671 0.66 -0.2
702,593 + ECD_00671 0.66 -0.1
702,593 + ECD_00671 0.66 +0.4
702,594 - ECD_00671 0.67 +0.9
702,623 + ECD_00671 0.71 -0.3
702,758 + +0.3
702,758 + +0.3
702,758 + -0.4
702,758 + -0.3
702,761 + -0.6
702,788 + -0.2
702,834 + +0.2
702,834 + -0.1
702,834 + +0.3
702,834 + +0.7
702,834 + -0.5
702,834 + -0.4
702,835 - +0.1
702,835 - +0.2
702,836 + -0.7
703,055 + ECD_00672 0.27 +0.5
703,055 + ECD_00672 0.27 -0.3
703,112 + ECD_00672 0.33 +0.0

Or see this region's nucleotide sequence