Strain Fitness in Escherichia coli BL21 around ECD_00612

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00611 and ECD_00612 are separated by 234 nucleotides ECD_00611: ECD_00611 - leucyl-tRNA synthetase, at 632,564 to 635,146 _00611 ECD_00612: ECD_00612 - DUF1451 family protein, at 635,381 to 635,863 _00612 Position (kb) 635 636Strain fitness (log2 ratio) -1 0 1at 635.281 kb on + strandat 635.344 kb on - strandat 635.347 kb on - strandat 635.349 kb on + strandat 635.350 kb on - strandat 635.399 kb on + strandat 635.400 kb on - strandat 635.402 kb on + strandat 635.576 kb on + strand, within ECD_00612at 635.739 kb on + strand, within ECD_00612at 636.054 kb on + strandat 636.055 kb on - strandat 636.055 kb on - strandat 636.071 kb on - strandat 636.160 kb on + strandat 636.160 kb on + strandat 636.162 kb on + strandat 636.162 kb on + strandat 636.163 kb on - strandat 636.163 kb on - strandat 636.166 kb on + strandat 636.166 kb on + strandat 636.166 kb on + strandat 636.167 kb on - strandat 636.167 kb on - strandat 636.167 kb on - strandat 636.183 kb on + strandat 636.225 kb on + strandat 636.226 kb on - strandat 636.226 kb on - strandat 636.238 kb on + strandat 636.241 kb on - strandat 636.241 kb on - strandat 636.271 kb on - strandat 636.271 kb on - strandat 636.410 kb on - strandat 636.457 kb on - strandat 636.543 kb on + strandat 636.562 kb on + strandat 636.674 kb on - strandat 636.674 kb on - strandat 636.760 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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635,281 + +0.4
635,344 - -0.7
635,347 - +0.5
635,349 + +0.4
635,350 - +0.7
635,399 + +0.8
635,400 - +0.4
635,402 + +0.4
635,576 + ECD_00612 0.40 -0.5
635,739 + ECD_00612 0.74 -0.8
636,054 + -0.4
636,055 - +0.2
636,055 - +0.3
636,071 - -0.5
636,160 + -0.6
636,160 + +0.4
636,162 + -0.3
636,162 + +0.2
636,163 - +0.2
636,163 - -0.8
636,166 + -0.3
636,166 + -0.7
636,166 + -0.7
636,167 - +0.2
636,167 - +0.6
636,167 - +0.1
636,183 + -1.1
636,225 + -0.4
636,226 - -1.4
636,226 - +1.6
636,238 + -0.3
636,241 - -1.1
636,241 - +1.0
636,271 - -0.2
636,271 - -0.0
636,410 - +0.7
636,457 - -0.2
636,543 + +0.5
636,562 + -0.6
636,674 - -0.3
636,674 - +0.6
636,760 - +0.6

Or see this region's nucleotide sequence