Experiment: Bas33
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00463 and ECD_00464 are separated by 21 nucleotides ECD_00464 and ECD_00465 are separated by 227 nucleotides
ECD_00463: ECD_00463 - putative uracil/xanthine transporter, at 509,710 to 511,011
_00463
ECD_00464: ECD_00464 - glycerate kinase II, at 511,033 to 512,178
_00464
ECD_00465: ECD_00465 - S-ureidoglycine aminohydrolase, at 512,406 to 513,191
_00465
Position (kb) 511
512
513 Strain fitness (log2 ratio) -2
-1
0
1 at 510.095 kb on + strand, within ECD_00463 at 510.095 kb on + strand, within ECD_00463 at 510.099 kb on + strand, within ECD_00463 at 510.100 kb on - strand, within ECD_00463 at 510.123 kb on + strand, within ECD_00463 at 510.169 kb on - strand, within ECD_00463 at 510.271 kb on - strand, within ECD_00463 at 510.271 kb on - strand, within ECD_00463 at 510.508 kb on + strand, within ECD_00463 at 510.652 kb on + strand, within ECD_00463 at 510.669 kb on + strand, within ECD_00463 at 510.736 kb on - strand, within ECD_00463 at 511.002 kb on + strand at 511.073 kb on + strand at 511.101 kb on + strand at 511.138 kb on + strand at 511.138 kb on + strand at 511.138 kb on + strand at 511.138 kb on + strand at 511.417 kb on - strand, within ECD_00464 at 511.530 kb on + strand, within ECD_00464 at 511.717 kb on + strand, within ECD_00464 at 511.827 kb on + strand, within ECD_00464 at 512.375 kb on + strand at 512.376 kb on - strand at 512.578 kb on + strand, within ECD_00465 at 512.708 kb on + strand, within ECD_00465 at 512.716 kb on + strand, within ECD_00465 at 512.776 kb on - strand, within ECD_00465 at 512.795 kb on + strand, within ECD_00465 at 512.796 kb on - strand, within ECD_00465 at 512.797 kb on + strand, within ECD_00465 at 512.919 kb on - strand, within ECD_00465 at 512.936 kb on - strand, within ECD_00465 at 513.150 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas33 remove 510,095 + ECD_00463 0.30 +0.5 510,095 + ECD_00463 0.30 -0.8 510,099 + ECD_00463 0.30 -0.5 510,100 - ECD_00463 0.30 -1.8 510,123 + ECD_00463 0.32 -0.7 510,169 - ECD_00463 0.35 +0.4 510,271 - ECD_00463 0.43 +0.2 510,271 - ECD_00463 0.43 -0.2 510,508 + ECD_00463 0.61 +1.1 510,652 + ECD_00463 0.72 -0.1 510,669 + ECD_00463 0.74 +0.4 510,736 - ECD_00463 0.79 +0.6 511,002 + -0.4 511,073 + +0.3 511,101 + -0.2 511,138 + +0.2 511,138 + -0.2 511,138 + +0.3 511,138 + +0.2 511,417 - ECD_00464 0.34 -0.3 511,530 + ECD_00464 0.43 -2.5 511,717 + ECD_00464 0.60 -0.4 511,827 + ECD_00464 0.69 +0.1 512,375 + -0.3 512,376 - -0.5 512,578 + ECD_00465 0.22 +0.1 512,708 + ECD_00465 0.38 +0.1 512,716 + ECD_00465 0.39 +0.3 512,776 - ECD_00465 0.47 -0.6 512,795 + ECD_00465 0.49 -0.3 512,796 - ECD_00465 0.50 -2.0 512,797 + ECD_00465 0.50 +0.3 512,919 - ECD_00465 0.65 +0.5 512,936 - ECD_00465 0.67 +1.1 513,150 + -0.8
Or see this region's nucleotide sequence