Strain Fitness in Escherichia coli BL21 around ECD_00464

Experiment: Bas33

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00463 and ECD_00464 are separated by 21 nucleotidesECD_00464 and ECD_00465 are separated by 227 nucleotides ECD_00463: ECD_00463 - putative uracil/xanthine transporter, at 509,710 to 511,011 _00463 ECD_00464: ECD_00464 - glycerate kinase II, at 511,033 to 512,178 _00464 ECD_00465: ECD_00465 - S-ureidoglycine aminohydrolase, at 512,406 to 513,191 _00465 Position (kb) 511 512 513Strain fitness (log2 ratio) -2 -1 0 1at 510.095 kb on + strand, within ECD_00463at 510.095 kb on + strand, within ECD_00463at 510.099 kb on + strand, within ECD_00463at 510.100 kb on - strand, within ECD_00463at 510.123 kb on + strand, within ECD_00463at 510.169 kb on - strand, within ECD_00463at 510.271 kb on - strand, within ECD_00463at 510.271 kb on - strand, within ECD_00463at 510.508 kb on + strand, within ECD_00463at 510.652 kb on + strand, within ECD_00463at 510.669 kb on + strand, within ECD_00463at 510.736 kb on - strand, within ECD_00463at 511.002 kb on + strandat 511.073 kb on + strandat 511.101 kb on + strandat 511.138 kb on + strandat 511.138 kb on + strandat 511.138 kb on + strandat 511.138 kb on + strandat 511.417 kb on - strand, within ECD_00464at 511.530 kb on + strand, within ECD_00464at 511.717 kb on + strand, within ECD_00464at 511.827 kb on + strand, within ECD_00464at 512.375 kb on + strandat 512.376 kb on - strandat 512.578 kb on + strand, within ECD_00465at 512.708 kb on + strand, within ECD_00465at 512.716 kb on + strand, within ECD_00465at 512.776 kb on - strand, within ECD_00465at 512.795 kb on + strand, within ECD_00465at 512.796 kb on - strand, within ECD_00465at 512.797 kb on + strand, within ECD_00465at 512.919 kb on - strand, within ECD_00465at 512.936 kb on - strand, within ECD_00465at 513.150 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas33
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510,095 + ECD_00463 0.30 +0.5
510,095 + ECD_00463 0.30 -0.8
510,099 + ECD_00463 0.30 -0.5
510,100 - ECD_00463 0.30 -1.8
510,123 + ECD_00463 0.32 -0.7
510,169 - ECD_00463 0.35 +0.4
510,271 - ECD_00463 0.43 +0.2
510,271 - ECD_00463 0.43 -0.2
510,508 + ECD_00463 0.61 +1.1
510,652 + ECD_00463 0.72 -0.1
510,669 + ECD_00463 0.74 +0.4
510,736 - ECD_00463 0.79 +0.6
511,002 + -0.4
511,073 + +0.3
511,101 + -0.2
511,138 + +0.2
511,138 + -0.2
511,138 + +0.3
511,138 + +0.2
511,417 - ECD_00464 0.34 -0.3
511,530 + ECD_00464 0.43 -2.5
511,717 + ECD_00464 0.60 -0.4
511,827 + ECD_00464 0.69 +0.1
512,375 + -0.3
512,376 - -0.5
512,578 + ECD_00465 0.22 +0.1
512,708 + ECD_00465 0.38 +0.1
512,716 + ECD_00465 0.39 +0.3
512,776 - ECD_00465 0.47 -0.6
512,795 + ECD_00465 0.49 -0.3
512,796 - ECD_00465 0.50 -2.0
512,797 + ECD_00465 0.50 +0.3
512,919 - ECD_00465 0.65 +0.5
512,936 - ECD_00465 0.67 +1.1
513,150 + -0.8

Or see this region's nucleotide sequence