Strain Fitness in Escherichia coli BL21 around ECD_02762

Experiment: Ox4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02760 and ECD_02761 are separated by 21 nucleotidesECD_02761 and ECD_02762 overlap by 4 nucleotidesECD_02762 and ECD_02763 are separated by 14 nucleotides ECD_02760: ECD_02760 - MtlR family putative transcriptional repressor, at 2,905,544 to 2,906,053 _02760 ECD_02761: ECD_02761 - fructose 1,6 bisphosphatase isozyme, at 2,906,075 to 2,907,040 _02761 ECD_02762: ECD_02762 - putative Zn-binding dehydrogenase, at 2,907,037 to 2,908,314 _02762 ECD_02763: ECD_02763 - putative mannitol-specific PTS IIB and IIC components, at 2,908,329 to 2,909,717 _02763 Position (kb) 2907 2908 2909Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2906.066 kb on - strandat 2906.090 kb on + strandat 2906.090 kb on + strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.091 kb on - strandat 2906.093 kb on + strandat 2906.093 kb on + strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.094 kb on - strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.095 kb on + strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.096 kb on - strandat 2906.098 kb on + strandat 2906.098 kb on + strandat 2906.099 kb on - strandat 2906.127 kb on - strandat 2906.127 kb on - strandat 2906.127 kb on - strandat 2906.127 kb on - strandat 2906.204 kb on - strand, within ECD_02761at 2906.319 kb on + strand, within ECD_02761at 2906.320 kb on - strand, within ECD_02761at 2906.427 kb on + strand, within ECD_02761at 2906.427 kb on + strand, within ECD_02761at 2906.427 kb on + strand, within ECD_02761at 2906.428 kb on - strand, within ECD_02761at 2906.687 kb on - strand, within ECD_02761at 2906.688 kb on + strand, within ECD_02761at 2906.688 kb on + strand, within ECD_02761at 2906.688 kb on + strand, within ECD_02761at 2906.689 kb on - strand, within ECD_02761at 2906.689 kb on - strand, within ECD_02761at 2906.689 kb on - strand, within ECD_02761at 2906.689 kb on - strand, within ECD_02761at 2906.689 kb on - strand, within ECD_02761at 2906.689 kb on - strand, within ECD_02761at 2906.689 kb on - strand, within ECD_02761at 2906.705 kb on + strand, within ECD_02761at 2906.705 kb on + strand, within ECD_02761at 2906.706 kb on - strand, within ECD_02761at 2906.706 kb on - strand, within ECD_02761at 2906.706 kb on - strand, within ECD_02761at 2906.706 kb on - strand, within ECD_02761at 2906.706 kb on - strand, within ECD_02761at 2906.706 kb on - strand, within ECD_02761at 2906.713 kb on + strand, within ECD_02761at 2906.714 kb on - strand, within ECD_02761at 2907.084 kb on - strandat 2907.145 kb on - strandat 2907.214 kb on - strand, within ECD_02762at 2907.216 kb on - strand, within ECD_02762at 2907.216 kb on - strand, within ECD_02762at 2907.216 kb on - strand, within ECD_02762at 2907.301 kb on - strand, within ECD_02762at 2907.313 kb on + strand, within ECD_02762at 2907.314 kb on - strand, within ECD_02762at 2907.375 kb on + strand, within ECD_02762at 2907.399 kb on - strand, within ECD_02762at 2907.411 kb on - strand, within ECD_02762at 2907.484 kb on + strand, within ECD_02762at 2907.601 kb on - strand, within ECD_02762at 2907.608 kb on + strand, within ECD_02762at 2907.608 kb on + strand, within ECD_02762at 2907.608 kb on + strand, within ECD_02762at 2907.608 kb on + strand, within ECD_02762at 2907.609 kb on - strand, within ECD_02762at 2907.609 kb on - strand, within ECD_02762at 2907.609 kb on - strand, within ECD_02762at 2907.609 kb on - strand, within ECD_02762at 2907.609 kb on - strand, within ECD_02762at 2907.609 kb on - strand, within ECD_02762at 2907.609 kb on - strand, within ECD_02762at 2907.628 kb on - strand, within ECD_02762at 2907.662 kb on - strand, within ECD_02762at 2907.715 kb on + strand, within ECD_02762at 2907.716 kb on - strand, within ECD_02762at 2907.716 kb on - strand, within ECD_02762at 2907.716 kb on - strand, within ECD_02762at 2907.716 kb on - strand, within ECD_02762at 2907.716 kb on - strand, within ECD_02762at 2907.818 kb on + strand, within ECD_02762at 2907.819 kb on - strand, within ECD_02762at 2907.824 kb on + strand, within ECD_02762at 2907.825 kb on - strand, within ECD_02762at 2907.825 kb on - strand, within ECD_02762at 2907.839 kb on + strand, within ECD_02762at 2907.840 kb on - strand, within ECD_02762at 2907.851 kb on + strand, within ECD_02762at 2907.852 kb on - strand, within ECD_02762at 2907.861 kb on + strand, within ECD_02762at 2907.874 kb on - strand, within ECD_02762at 2907.874 kb on - strand, within ECD_02762at 2907.874 kb on - strand, within ECD_02762at 2907.874 kb on - strand, within ECD_02762at 2907.874 kb on - strand, within ECD_02762at 2907.874 kb on - strand, within ECD_02762at 2907.915 kb on - strand, within ECD_02762at 2907.920 kb on - strand, within ECD_02762at 2907.955 kb on - strand, within ECD_02762at 2907.955 kb on - strand, within ECD_02762at 2907.961 kb on - strand, within ECD_02762at 2907.961 kb on - strand, within ECD_02762at 2907.963 kb on - strand, within ECD_02762at 2907.963 kb on - strand, within ECD_02762at 2907.963 kb on - strand, within ECD_02762at 2907.990 kb on - strand, within ECD_02762at 2908.159 kb on - strand, within ECD_02762at 2908.294 kb on - strandat 2908.492 kb on - strand, within ECD_02763at 2908.506 kb on + strand, within ECD_02763at 2908.507 kb on - strand, within ECD_02763at 2908.717 kb on - strand, within ECD_02763at 2908.727 kb on + strand, within ECD_02763at 2908.727 kb on + strand, within ECD_02763at 2908.748 kb on + strand, within ECD_02763at 2908.749 kb on - strand, within ECD_02763at 2908.753 kb on - strand, within ECD_02763at 2908.808 kb on - strand, within ECD_02763at 2908.817 kb on + strand, within ECD_02763at 2908.857 kb on + strand, within ECD_02763at 2908.862 kb on + strand, within ECD_02763at 2908.863 kb on - strand, within ECD_02763at 2908.863 kb on - strand, within ECD_02763at 2908.883 kb on + strand, within ECD_02763at 2908.904 kb on + strand, within ECD_02763at 2908.931 kb on - strand, within ECD_02763at 2908.940 kb on - strand, within ECD_02763at 2908.971 kb on - strand, within ECD_02763at 2909.085 kb on - strand, within ECD_02763at 2909.120 kb on - strand, within ECD_02763at 2909.122 kb on + strand, within ECD_02763at 2909.123 kb on - strand, within ECD_02763at 2909.123 kb on - strand, within ECD_02763at 2909.145 kb on - strand, within ECD_02763at 2909.197 kb on + strand, within ECD_02763at 2909.209 kb on - strand, within ECD_02763at 2909.222 kb on + strand, within ECD_02763at 2909.222 kb on + strand, within ECD_02763at 2909.223 kb on - strand, within ECD_02763at 2909.250 kb on + strand, within ECD_02763at 2909.251 kb on - strand, within ECD_02763at 2909.267 kb on + strand, within ECD_02763

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Per-strain Table

Position Strand Gene LocusTag Fraction Ox4
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2,906,066 - +2.4
2,906,090 + +2.8
2,906,090 + +0.3
2,906,091 - -1.2
2,906,091 - +2.0
2,906,091 - +2.4
2,906,091 - +1.4
2,906,091 - +0.8
2,906,093 + -0.9
2,906,093 + -0.7
2,906,094 - -1.3
2,906,094 - -0.6
2,906,094 - +1.2
2,906,094 - +2.8
2,906,094 - -0.2
2,906,094 - -0.2
2,906,094 - -0.9
2,906,094 - -0.3
2,906,095 + +2.5
2,906,095 + -2.2
2,906,095 + +2.0
2,906,095 + +2.5
2,906,095 + -0.8
2,906,095 + -1.1
2,906,095 + -1.3
2,906,095 + -1.4
2,906,095 + -0.1
2,906,096 - -0.0
2,906,096 - +1.5
2,906,096 - +1.0
2,906,096 - +0.1
2,906,096 - -1.0
2,906,096 - +0.4
2,906,098 + -1.2
2,906,098 + -0.4
2,906,099 - +1.3
2,906,127 - -0.7
2,906,127 - -1.3
2,906,127 - +2.2
2,906,127 - -0.0
2,906,204 - ECD_02761 0.13 -1.0
2,906,319 + ECD_02761 0.25 +2.9
2,906,320 - ECD_02761 0.25 -0.7
2,906,427 + ECD_02761 0.36 +2.6
2,906,427 + ECD_02761 0.36 +0.9
2,906,427 + ECD_02761 0.36 -1.0
2,906,428 - ECD_02761 0.37 -2.3
2,906,687 - ECD_02761 0.63 -1.0
2,906,688 + ECD_02761 0.63 -0.9
2,906,688 + ECD_02761 0.63 -1.4
2,906,688 + ECD_02761 0.63 +2.1
2,906,689 - ECD_02761 0.64 -1.1
2,906,689 - ECD_02761 0.64 +0.5
2,906,689 - ECD_02761 0.64 -0.4
2,906,689 - ECD_02761 0.64 -0.5
2,906,689 - ECD_02761 0.64 +0.0
2,906,689 - ECD_02761 0.64 -1.6
2,906,689 - ECD_02761 0.64 -0.6
2,906,705 + ECD_02761 0.65 +0.1
2,906,705 + ECD_02761 0.65 -0.5
2,906,706 - ECD_02761 0.65 -1.8
2,906,706 - ECD_02761 0.65 -1.0
2,906,706 - ECD_02761 0.65 -0.7
2,906,706 - ECD_02761 0.65 +0.1
2,906,706 - ECD_02761 0.65 -0.5
2,906,706 - ECD_02761 0.65 -0.8
2,906,713 + ECD_02761 0.66 +0.5
2,906,714 - ECD_02761 0.66 +1.4
2,907,084 - -0.9
2,907,145 - +2.8
2,907,214 - ECD_02762 0.14 -0.4
2,907,216 - ECD_02762 0.14 -0.4
2,907,216 - ECD_02762 0.14 +0.1
2,907,216 - ECD_02762 0.14 -0.0
2,907,301 - ECD_02762 0.21 +1.2
2,907,313 + ECD_02762 0.22 +3.0
2,907,314 - ECD_02762 0.22 -2.2
2,907,375 + ECD_02762 0.26 +3.2
2,907,399 - ECD_02762 0.28 +1.6
2,907,411 - ECD_02762 0.29 +2.4
2,907,484 + ECD_02762 0.35 +0.0
2,907,601 - ECD_02762 0.44 -2.6
2,907,608 + ECD_02762 0.45 +2.7
2,907,608 + ECD_02762 0.45 +2.9
2,907,608 + ECD_02762 0.45 -0.7
2,907,608 + ECD_02762 0.45 +1.0
2,907,609 - ECD_02762 0.45 -0.6
2,907,609 - ECD_02762 0.45 -0.1
2,907,609 - ECD_02762 0.45 +2.1
2,907,609 - ECD_02762 0.45 -0.6
2,907,609 - ECD_02762 0.45 -0.5
2,907,609 - ECD_02762 0.45 -0.1
2,907,609 - ECD_02762 0.45 -0.4
2,907,628 - ECD_02762 0.46 -0.4
2,907,662 - ECD_02762 0.49 -0.8
2,907,715 + ECD_02762 0.53 -0.1
2,907,716 - ECD_02762 0.53 +1.9
2,907,716 - ECD_02762 0.53 +2.7
2,907,716 - ECD_02762 0.53 +1.9
2,907,716 - ECD_02762 0.53 -0.9
2,907,716 - ECD_02762 0.53 +2.1
2,907,818 + ECD_02762 0.61 -0.3
2,907,819 - ECD_02762 0.61 +0.2
2,907,824 + ECD_02762 0.62 -0.5
2,907,825 - ECD_02762 0.62 -1.6
2,907,825 - ECD_02762 0.62 +1.8
2,907,839 + ECD_02762 0.63 -0.6
2,907,840 - ECD_02762 0.63 +2.4
2,907,851 + ECD_02762 0.64 +3.3
2,907,852 - ECD_02762 0.64 -1.4
2,907,861 + ECD_02762 0.64 -0.3
2,907,874 - ECD_02762 0.65 -1.7
2,907,874 - ECD_02762 0.65 +0.4
2,907,874 - ECD_02762 0.65 -1.0
2,907,874 - ECD_02762 0.65 -0.8
2,907,874 - ECD_02762 0.65 +2.3
2,907,874 - ECD_02762 0.65 -0.8
2,907,915 - ECD_02762 0.69 +0.4
2,907,920 - ECD_02762 0.69 -3.0
2,907,955 - ECD_02762 0.72 -2.6
2,907,955 - ECD_02762 0.72 -0.1
2,907,961 - ECD_02762 0.72 -0.8
2,907,961 - ECD_02762 0.72 -0.3
2,907,963 - ECD_02762 0.72 +1.9
2,907,963 - ECD_02762 0.72 -0.7
2,907,963 - ECD_02762 0.72 -1.9
2,907,990 - ECD_02762 0.75 +1.9
2,908,159 - ECD_02762 0.88 -1.2
2,908,294 - +0.0
2,908,492 - ECD_02763 0.12 -1.8
2,908,506 + ECD_02763 0.13 -0.7
2,908,507 - ECD_02763 0.13 +0.1
2,908,717 - ECD_02763 0.28 +0.8
2,908,727 + ECD_02763 0.29 +0.2
2,908,727 + ECD_02763 0.29 -0.5
2,908,748 + ECD_02763 0.30 +0.9
2,908,749 - ECD_02763 0.30 +0.6
2,908,753 - ECD_02763 0.31 -3.4
2,908,808 - ECD_02763 0.34 -1.6
2,908,817 + ECD_02763 0.35 +2.8
2,908,857 + ECD_02763 0.38 +0.7
2,908,862 + ECD_02763 0.38 +1.2
2,908,863 - ECD_02763 0.38 -1.7
2,908,863 - ECD_02763 0.38 +2.5
2,908,883 + ECD_02763 0.40 +0.7
2,908,904 + ECD_02763 0.41 -0.6
2,908,931 - ECD_02763 0.43 -1.6
2,908,940 - ECD_02763 0.44 +2.4
2,908,971 - ECD_02763 0.46 +2.1
2,909,085 - ECD_02763 0.54 +0.1
2,909,120 - ECD_02763 0.57 +1.9
2,909,122 + ECD_02763 0.57 -1.5
2,909,123 - ECD_02763 0.57 -2.5
2,909,123 - ECD_02763 0.57 -0.6
2,909,145 - ECD_02763 0.59 +0.3
2,909,197 + ECD_02763 0.62 +1.5
2,909,209 - ECD_02763 0.63 +0.0
2,909,222 + ECD_02763 0.64 +0.8
2,909,222 + ECD_02763 0.64 +0.3
2,909,223 - ECD_02763 0.64 -0.5
2,909,250 + ECD_02763 0.66 -0.4
2,909,251 - ECD_02763 0.66 -0.5
2,909,267 + ECD_02763 0.68 -0.9

Or see this region's nucleotide sequence