Experiment: Ox4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02045 and ECD_02046 are separated by 9 nucleotides ECD_02046 and ECD_02047 are separated by 60 nucleotides ECD_02047 and ECD_02048 are separated by 306 nucleotides
ECD_02045: ECD_02045 - molybdate metabolism regulator, at 2,091,337 to 2,095,131
_02045
ECD_02046: ECD_02046 - DUF4132 domain-containing protein, at 2,095,141 to 2,098,773
_02046
ECD_02047: ECD_02047 - uncharacterized protein, at 2,098,834 to 2,099,151
_02047
ECD_02048: ECD_02048 - putative hexameric AAA+ MoxR family ATPase, at 2,099,458 to 2,100,546
_02048
Position (kb)
2095
2096
2097
2098
2099 Strain fitness (log2 ratio)
-2
-1
0
1 at 2094.539 kb on - strand, within ECD_02045 at 2094.557 kb on + strand, within ECD_02045 at 2094.558 kb on - strand, within ECD_02045 at 2094.570 kb on + strand, within ECD_02045 at 2094.593 kb on - strand, within ECD_02045 at 2094.593 kb on - strand, within ECD_02045 at 2095.104 kb on + strand at 2095.563 kb on - strand, within ECD_02046 at 2095.576 kb on + strand, within ECD_02046 at 2095.592 kb on - strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.895 kb on + strand, within ECD_02046 at 2095.896 kb on - strand, within ECD_02046 at 2095.899 kb on + strand, within ECD_02046 at 2095.919 kb on - strand, within ECD_02046 at 2096.122 kb on - strand, within ECD_02046 at 2096.122 kb on - strand, within ECD_02046 at 2096.269 kb on - strand, within ECD_02046 at 2096.269 kb on - strand, within ECD_02046 at 2096.367 kb on - strand, within ECD_02046 at 2096.616 kb on - strand, within ECD_02046 at 2096.664 kb on + strand, within ECD_02046 at 2096.723 kb on - strand, within ECD_02046 at 2096.807 kb on + strand, within ECD_02046 at 2096.842 kb on + strand, within ECD_02046 at 2096.843 kb on - strand, within ECD_02046 at 2097.162 kb on + strand, within ECD_02046 at 2097.663 kb on - strand, within ECD_02046 at 2097.774 kb on + strand, within ECD_02046 at 2098.140 kb on + strand, within ECD_02046 at 2098.582 kb on + strand at 2099.661 kb on + strand, within ECD_02048
Per-strain Table
Position Strand Gene LocusTag Fraction Ox4 remove 2,094,539 - ECD_02045 0.84 -0.7 2,094,557 + ECD_02045 0.85 -0.3 2,094,558 - ECD_02045 0.85 -1.1 2,094,570 + ECD_02045 0.85 -1.7 2,094,593 - ECD_02045 0.86 +0.9 2,094,593 - ECD_02045 0.86 -0.8 2,095,104 + +0.5 2,095,563 - ECD_02046 0.12 -0.3 2,095,576 + ECD_02046 0.12 +0.9 2,095,592 - ECD_02046 0.12 -0.9 2,095,895 + ECD_02046 0.21 -0.7 2,095,895 + ECD_02046 0.21 +0.3 2,095,895 + ECD_02046 0.21 +0.4 2,095,896 - ECD_02046 0.21 +0.1 2,095,899 + ECD_02046 0.21 -0.3 2,095,919 - ECD_02046 0.21 -0.8 2,096,122 - ECD_02046 0.27 -0.9 2,096,122 - ECD_02046 0.27 +0.7 2,096,269 - ECD_02046 0.31 +0.4 2,096,269 - ECD_02046 0.31 -1.1 2,096,367 - ECD_02046 0.34 +1.6 2,096,616 - ECD_02046 0.41 +0.8 2,096,664 + ECD_02046 0.42 +1.0 2,096,723 - ECD_02046 0.44 -0.9 2,096,807 + ECD_02046 0.46 +1.2 2,096,842 + ECD_02046 0.47 +0.4 2,096,843 - ECD_02046 0.47 -0.3 2,097,162 + ECD_02046 0.56 +0.4 2,097,663 - ECD_02046 0.69 +1.0 2,097,774 + ECD_02046 0.72 -2.2 2,098,140 + ECD_02046 0.83 -0.6 2,098,582 + +0.3 2,099,661 + ECD_02048 0.19 +0.0
Or see this region's nucleotide sequence