Strain Fitness in Escherichia coli BL21 around ECD_02046

Experiment: Ox4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02045 and ECD_02046 are separated by 9 nucleotidesECD_02046 and ECD_02047 are separated by 60 nucleotidesECD_02047 and ECD_02048 are separated by 306 nucleotides ECD_02045: ECD_02045 - molybdate metabolism regulator, at 2,091,337 to 2,095,131 _02045 ECD_02046: ECD_02046 - DUF4132 domain-containing protein, at 2,095,141 to 2,098,773 _02046 ECD_02047: ECD_02047 - uncharacterized protein, at 2,098,834 to 2,099,151 _02047 ECD_02048: ECD_02048 - putative hexameric AAA+ MoxR family ATPase, at 2,099,458 to 2,100,546 _02048 Position (kb) 2095 2096 2097 2098 2099Strain fitness (log2 ratio) -2 -1 0 1at 2094.539 kb on - strand, within ECD_02045at 2094.557 kb on + strand, within ECD_02045at 2094.558 kb on - strand, within ECD_02045at 2094.570 kb on + strand, within ECD_02045at 2094.593 kb on - strand, within ECD_02045at 2094.593 kb on - strand, within ECD_02045at 2095.104 kb on + strandat 2095.563 kb on - strand, within ECD_02046at 2095.576 kb on + strand, within ECD_02046at 2095.592 kb on - strand, within ECD_02046at 2095.895 kb on + strand, within ECD_02046at 2095.895 kb on + strand, within ECD_02046at 2095.895 kb on + strand, within ECD_02046at 2095.896 kb on - strand, within ECD_02046at 2095.899 kb on + strand, within ECD_02046at 2095.919 kb on - strand, within ECD_02046at 2096.122 kb on - strand, within ECD_02046at 2096.122 kb on - strand, within ECD_02046at 2096.269 kb on - strand, within ECD_02046at 2096.269 kb on - strand, within ECD_02046at 2096.367 kb on - strand, within ECD_02046at 2096.616 kb on - strand, within ECD_02046at 2096.664 kb on + strand, within ECD_02046at 2096.723 kb on - strand, within ECD_02046at 2096.807 kb on + strand, within ECD_02046at 2096.842 kb on + strand, within ECD_02046at 2096.843 kb on - strand, within ECD_02046at 2097.162 kb on + strand, within ECD_02046at 2097.663 kb on - strand, within ECD_02046at 2097.774 kb on + strand, within ECD_02046at 2098.140 kb on + strand, within ECD_02046at 2098.582 kb on + strandat 2099.661 kb on + strand, within ECD_02048

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Per-strain Table

Position Strand Gene LocusTag Fraction Ox4
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2,094,539 - ECD_02045 0.84 -0.7
2,094,557 + ECD_02045 0.85 -0.3
2,094,558 - ECD_02045 0.85 -1.1
2,094,570 + ECD_02045 0.85 -1.7
2,094,593 - ECD_02045 0.86 +0.9
2,094,593 - ECD_02045 0.86 -0.8
2,095,104 + +0.5
2,095,563 - ECD_02046 0.12 -0.3
2,095,576 + ECD_02046 0.12 +0.9
2,095,592 - ECD_02046 0.12 -0.9
2,095,895 + ECD_02046 0.21 -0.7
2,095,895 + ECD_02046 0.21 +0.3
2,095,895 + ECD_02046 0.21 +0.4
2,095,896 - ECD_02046 0.21 +0.1
2,095,899 + ECD_02046 0.21 -0.3
2,095,919 - ECD_02046 0.21 -0.8
2,096,122 - ECD_02046 0.27 -0.9
2,096,122 - ECD_02046 0.27 +0.7
2,096,269 - ECD_02046 0.31 +0.4
2,096,269 - ECD_02046 0.31 -1.1
2,096,367 - ECD_02046 0.34 +1.6
2,096,616 - ECD_02046 0.41 +0.8
2,096,664 + ECD_02046 0.42 +1.0
2,096,723 - ECD_02046 0.44 -0.9
2,096,807 + ECD_02046 0.46 +1.2
2,096,842 + ECD_02046 0.47 +0.4
2,096,843 - ECD_02046 0.47 -0.3
2,097,162 + ECD_02046 0.56 +0.4
2,097,663 - ECD_02046 0.69 +1.0
2,097,774 + ECD_02046 0.72 -2.2
2,098,140 + ECD_02046 0.83 -0.6
2,098,582 + +0.3
2,099,661 + ECD_02048 0.19 +0.0

Or see this region's nucleotide sequence