Experiment: Ox4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00690 and ECD_00691 are separated by 17 nucleotides ECD_00691 and ECD_00692 are separated by 846 nucleotides
ECD_00690: ECD_00690 - fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component, at 724,645 to 726,621
_00690
ECD_00691: ECD_00691 - alpha-mannosidase, at 726,639 to 729,272
_00691
ECD_00692: ECD_00692 - cytochrome d terminal oxidase, subunit I, at 730,119 to 731,687
_00692
Position (kb) 726
727
728
729
730 Strain fitness (log2 ratio) -1
0
1
2 at 725.704 kb on + strand, within ECD_00690 at 725.762 kb on - strand, within ECD_00690 at 726.099 kb on + strand, within ECD_00690 at 726.225 kb on + strand, within ECD_00690 at 726.226 kb on - strand, within ECD_00690 at 726.595 kb on + strand at 726.649 kb on + strand at 726.777 kb on + strand at 726.868 kb on + strand at 727.051 kb on - strand, within ECD_00691 at 727.197 kb on + strand, within ECD_00691 at 727.198 kb on - strand, within ECD_00691 at 727.202 kb on - strand, within ECD_00691 at 727.226 kb on + strand, within ECD_00691 at 727.349 kb on - strand, within ECD_00691 at 727.468 kb on - strand, within ECD_00691 at 727.658 kb on + strand, within ECD_00691 at 727.750 kb on - strand, within ECD_00691 at 727.908 kb on + strand, within ECD_00691 at 727.945 kb on + strand, within ECD_00691 at 727.978 kb on - strand, within ECD_00691 at 728.027 kb on + strand, within ECD_00691 at 728.047 kb on - strand, within ECD_00691 at 728.232 kb on + strand, within ECD_00691 at 728.424 kb on - strand, within ECD_00691 at 728.634 kb on - strand, within ECD_00691 at 728.643 kb on + strand, within ECD_00691 at 728.643 kb on + strand, within ECD_00691 at 728.644 kb on - strand, within ECD_00691 at 728.653 kb on + strand, within ECD_00691 at 728.839 kb on + strand, within ECD_00691 at 728.839 kb on + strand, within ECD_00691 at 728.938 kb on + strand, within ECD_00691 at 729.089 kb on - strand at 729.089 kb on - strand at 729.468 kb on - strand at 729.470 kb on - strand at 729.779 kb on + strand at 729.938 kb on + strand at 729.942 kb on + strand at 730.018 kb on + strand at 730.071 kb on + strand at 730.129 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ox4 remove 725,704 + ECD_00690 0.54 +0.1 725,762 - ECD_00690 0.56 -0.5 726,099 + ECD_00690 0.74 +0.2 726,225 + ECD_00690 0.80 +0.2 726,226 - ECD_00690 0.80 +1.0 726,595 + +1.3 726,649 + -0.6 726,777 + -0.2 726,868 + +1.8 727,051 - ECD_00691 0.16 +0.2 727,197 + ECD_00691 0.21 +1.0 727,198 - ECD_00691 0.21 -1.6 727,202 - ECD_00691 0.21 +1.0 727,226 + ECD_00691 0.22 -0.2 727,349 - ECD_00691 0.27 +0.8 727,468 - ECD_00691 0.31 -0.6 727,658 + ECD_00691 0.39 -0.6 727,750 - ECD_00691 0.42 +0.8 727,908 + ECD_00691 0.48 +1.0 727,945 + ECD_00691 0.50 +1.0 727,978 - ECD_00691 0.51 +0.0 728,027 + ECD_00691 0.53 -0.9 728,047 - ECD_00691 0.53 +0.5 728,232 + ECD_00691 0.60 -1.5 728,424 - ECD_00691 0.68 +0.1 728,634 - ECD_00691 0.76 +0.4 728,643 + ECD_00691 0.76 +0.4 728,643 + ECD_00691 0.76 +0.6 728,644 - ECD_00691 0.76 +0.1 728,653 + ECD_00691 0.76 -0.4 728,839 + ECD_00691 0.84 +1.1 728,839 + ECD_00691 0.84 +0.5 728,938 + ECD_00691 0.87 -0.5 729,089 - -0.4 729,089 - +0.1 729,468 - -0.3 729,470 - +1.1 729,779 + +0.4 729,938 + -0.9 729,942 + -0.4 730,018 + -0.3 730,071 + +1.7 730,129 + +2.5
Or see this region's nucleotide sequence