Strain Fitness in Escherichia coli BL21 around ECD_03840

Experiment: Ox4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ox4
4,056,094	-				-1.4
4,056,113	+		ECD_03839	0.12	+3.6
4,056,113	+		ECD_03839	0.12	-1.0
4,056,113	+		ECD_03839	0.12	-0.3
4,056,114	-		ECD_03839	0.12	-0.8
4,056,167	+		ECD_03839	0.18	-0.6
4,056,186	+		ECD_03839	0.20	-0.1
4,056,186	+		ECD_03839	0.20	-1.2
4,056,187	-		ECD_03839	0.20	+0.5
4,056,187	-		ECD_03839	0.20	-0.8
4,056,216	-		ECD_03839	0.24	-1.2
4,056,223	-		ECD_03839	0.25	+0.7
4,056,277	-		ECD_03839	0.31	+0.4
4,056,333	+		ECD_03839	0.38	-0.3
4,056,335	+		ECD_03839	0.38	+0.2
4,056,345	+		ECD_03839	0.39	-0.0
4,056,355	+		ECD_03839	0.40	-1.3
4,056,503	-		ECD_03839	0.58	+0.1
4,056,549	-		ECD_03839	0.63	+0.5
4,056,610	-		ECD_03839	0.70	-0.5
4,056,665	+		ECD_03839	0.77	+1.6
4,056,665	+		ECD_03839	0.77	+0.1
4,056,666	-		ECD_03839	0.77	-0.1
4,056,666	-		ECD_03839	0.77	+0.8
4,056,686	-		ECD_03839	0.79	+0.2
4,056,845	+				-0.0
4,056,845	+				+0.6
4,056,860	+				+0.2
4,056,860	+				-0.1
4,056,861	-				-0.5
4,056,861	-				-0.4
4,056,861	-				+0.0
4,056,861	-				+0.6
4,056,861	-				+0.1
4,056,861	-				-1.1
4,056,861	-				-0.7
4,056,867	+				-1.1
4,056,867	+				-0.2
4,056,868	-				+0.2
4,056,875	+				-0.7
4,056,876	-				+0.0
4,056,879	+				+0.0
4,056,880	-				+0.6
4,056,880	-				-1.3
4,056,880	-				-0.7
4,056,880	-				+0.3
4,056,884	-				+1.7
4,056,884	-				-0.4
4,056,884	-				+0.1
4,056,884	-				-0.6
4,056,884	-				+3.9
4,056,898	+				-0.3
4,056,908	+				+0.3
4,056,908	+				-0.1
4,056,912	-				-0.5
4,056,973	+				-2.3
4,057,033	-				+0.7
4,057,077	-				-1.4
4,057,081	-				-0.1
4,057,081	-				-0.9
4,057,165	+				-2.9
4,057,224	-				-0.1
4,057,269	+		ECD_03840	0.11	-2.5
4,057,270	-		ECD_03840	0.11	-2.3
4,057,353	+		ECD_03840	0.16	-2.1
4,057,353	+		ECD_03840	0.16	-4.3
4,057,353	+		ECD_03840	0.16	-2.8
4,057,354	-		ECD_03840	0.16	-3.3
4,057,354	-		ECD_03840	0.16	-2.2
4,057,354	-		ECD_03840	0.16	-4.3
4,057,357	+		ECD_03840	0.16	-2.9
4,057,357	+		ECD_03840	0.16	-2.5
4,057,357	+		ECD_03840	0.16	-2.1
4,057,358	-		ECD_03840	0.16	-3.2
4,057,358	-		ECD_03840	0.16	-1.9
4,057,358	-		ECD_03840	0.16	-2.5
4,057,358	-		ECD_03840	0.16	-1.7
4,057,358	-		ECD_03840	0.16	-0.1
4,057,358	-		ECD_03840	0.16	-4.5
4,057,396	+		ECD_03840	0.18	-3.5
4,057,396	+		ECD_03840	0.18	-2.7
4,057,440	+		ECD_03840	0.21	-3.1
4,057,441	-		ECD_03840	0.21	-2.5
4,057,441	-		ECD_03840	0.21	-4.8
4,057,471	+		ECD_03840	0.23	-3.5
4,057,480	+		ECD_03840	0.23	-3.1
4,057,507	+		ECD_03840	0.25	-0.4
4,057,509	+		ECD_03840	0.25	-3.3
4,057,509	+		ECD_03840	0.25	-1.5
4,057,510	-		ECD_03840	0.25	-2.4
4,057,510	-		ECD_03840	0.25	-1.0
4,057,510	-		ECD_03840	0.25	-3.2
4,057,510	-		ECD_03840	0.25	-4.3
4,057,528	-		ECD_03840	0.26	-3.8
4,057,534	+		ECD_03840	0.26	-2.8
4,057,535	-		ECD_03840	0.26	-3.9
4,057,536	+		ECD_03840	0.26	-2.4
4,057,537	-		ECD_03840	0.26	-3.0
4,057,537	-		ECD_03840	0.26	-3.5
4,057,582	+		ECD_03840	0.29	-2.9
4,057,620	+		ECD_03840	0.31	-2.1
4,057,627	-		ECD_03840	0.32	-3.1
4,057,627	-		ECD_03840	0.32	-0.5
4,057,627	-		ECD_03840	0.32	-1.4
4,057,627	-		ECD_03840	0.32	-3.9
4,057,627	-		ECD_03840	0.32	-3.9
4,057,639	+		ECD_03840	0.32	-3.6
4,057,741	+		ECD_03840	0.38	-4.5
4,057,742	-		ECD_03840	0.38	-2.1
4,057,742	-		ECD_03840	0.38	-3.1
4,057,742	-		ECD_03840	0.38	-3.9
4,057,758	+		ECD_03840	0.39	-3.6
4,057,758	+		ECD_03840	0.39	-2.4
4,057,758	+		ECD_03840	0.39	-4.7
4,057,758	+		ECD_03840	0.39	-2.1
4,057,759	-		ECD_03840	0.39	-3.4
4,057,759	-		ECD_03840	0.39	-3.9
4,057,759	-		ECD_03840	0.39	-3.3
4,057,759	-		ECD_03840	0.39	-2.9
4,057,761	+		ECD_03840	0.39	-3.9
4,057,761	+		ECD_03840	0.39	-2.1
4,057,761	+		ECD_03840	0.39	-4.5
4,057,801	+		ECD_03840	0.42	-0.3
4,057,802	-		ECD_03840	0.42	-4.4
4,057,846	+		ECD_03840	0.44	-1.7
4,057,894	-		ECD_03840	0.47	-3.2
4,057,967	-		ECD_03840	0.51	-4.4
4,057,967	-		ECD_03840	0.51	-5.9
4,057,978	+		ECD_03840	0.52	-3.1
4,057,979	-		ECD_03840	0.52	-3.8
4,057,979	-		ECD_03840	0.52	-3.0
4,057,979	-		ECD_03840	0.52	-3.9
4,058,050	-		ECD_03840	0.56	-4.6
4,058,097	-		ECD_03840	0.59	-2.0
4,058,097	-		ECD_03840	0.59	-2.6
4,058,135	-		ECD_03840	0.61	-2.6
4,058,135	-		ECD_03840	0.61	-4.2
4,058,156	-		ECD_03840	0.62	-1.8
4,058,206	-		ECD_03840	0.65	-2.7
4,058,299	+		ECD_03840	0.70	-3.7
4,058,299	+		ECD_03840	0.70	-1.4
4,058,299	+		ECD_03840	0.70	-4.0
4,058,300	-		ECD_03840	0.70	-4.5
4,058,300	-		ECD_03840	0.70	-2.5
4,058,331	+		ECD_03840	0.72	-3.2
4,058,355	+		ECD_03840	0.74	-3.4
4,058,356	-		ECD_03840	0.74	-5.2
4,058,356	-		ECD_03840	0.74	-3.0
4,058,375	-		ECD_03840	0.75	-1.9
4,058,376	+		ECD_03840	0.75	-3.1
4,058,376	+		ECD_03840	0.75	-3.8
4,058,377	-		ECD_03840	0.75	-3.8
4,058,377	-		ECD_03840	0.75	-1.7
4,058,377	-		ECD_03840	0.75	-2.4
4,058,377	-		ECD_03840	0.75	-3.4
4,058,422	-		ECD_03840	0.77	-1.8
4,058,465	+		ECD_03840	0.80	-2.8
4,058,466	-		ECD_03840	0.80	-1.0
4,058,466	-		ECD_03840	0.80	-4.3
4,058,466	-		ECD_03840	0.80	-0.8
4,058,538	+		ECD_03840	0.84	-2.5
4,058,547	+		ECD_03840	0.85	-2.4
4,058,547	+		ECD_03840	0.85	-4.2
4,058,547	+		ECD_03840	0.85	-4.2
4,058,548	-		ECD_03840	0.85	-2.3
4,058,548	-		ECD_03840	0.85	-3.6
4,058,548	-		ECD_03840	0.85	-4.0
4,058,548	-		ECD_03840	0.85	-2.3
4,058,548	-		ECD_03840	0.85	-2.6
4,058,550	+		ECD_03840	0.85	-2.8
4,058,551	-		ECD_03840	0.85	-2.9
4,058,551	-		ECD_03840	0.85	-2.1
4,058,606	-		ECD_03840	0.88	-4.3
4,058,692	+				-2.4
4,058,693	-				-3.1
4,058,707	-				-2.8
4,058,710	+				-2.8
4,058,711	-				-3.8
4,058,711	-				-1.7
4,058,729	-				-3.7
4,058,746	-				-2.8
4,058,788	+				-2.5
4,058,812	+				-4.1
4,058,812	+				-3.3
4,058,812	+				-2.2
4,058,813	-				-3.6
4,058,813	-				-2.5
4,058,813	-				-3.8
4,058,815	+				-3.7
4,058,815	+				-3.5
4,058,815	+				-3.5
4,058,816	-				-3.7
4,058,816	-				-2.6
4,058,816	-				-4.4
4,058,816	-				-3.8
4,058,879	-				-0.2
4,058,879	-				-0.0
4,058,913	-				+0.1
4,058,913	-				-0.0
4,058,932	+				+1.0
4,058,943	+				-0.8
4,058,943	+				+0.6
4,059,012	-				-1.2
4,059,012	-				+0.0
4,059,124	-				+0.0
4,059,143	-				-1.3
4,059,154	-				-0.6
4,059,162	-				-0.7
4,059,253	-				-0.0
4,059,260	+		ECD_03841	0.10	-0.6
4,059,301	+		ECD_03841	0.12	+0.6
4,059,305	-		ECD_03841	0.12	+0.2
4,059,305	-		ECD_03841	0.12	-1.1
4,059,305	-		ECD_03841	0.12	-1.0
4,059,305	-		ECD_03841	0.12	-0.3
4,059,440	+		ECD_03841	0.17	+0.3
4,059,510	+		ECD_03841	0.19	-0.5
4,059,511	-		ECD_03841	0.19	+0.3
4,059,604	+		ECD_03841	0.23	-0.9
4,059,604	+		ECD_03841	0.23	+0.1
4,059,605	-		ECD_03841	0.23	-1.1
4,059,605	-		ECD_03841	0.23	-0.7
4,059,631	-		ECD_03841	0.24	-0.4
4,059,635	-		ECD_03841	0.24	-0.5
4,059,635	-		ECD_03841	0.24	+0.2
4,059,788	+		ECD_03841	0.30	-1.1