Experiment: Ox4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03610 and ECD_03611 overlap by 1 nucleotides ECD_03611 and ECD_03612 are separated by 85 nucleotides
ECD_03610: ECD_03610 - phosphate ABC transporter permease, at 3,797,351 to 3,798,241
_03610
ECD_03611: ECD_03611 - phosphate ABC transporter permease, at 3,798,241 to 3,799,200
_03611
ECD_03612: ECD_03612 - phosphate ABC transporter periplasmic binding protein, at 3,799,286 to 3,800,326
_03612
Position (kb)
3798
3799
3800 Strain fitness (log2 ratio)
-2
-1
0
1 at 3797.417 kb on - strand at 3797.427 kb on - strand at 3797.480 kb on - strand, within ECD_03610 at 3797.680 kb on - strand, within ECD_03610 at 3797.923 kb on - strand, within ECD_03610 at 3798.065 kb on - strand, within ECD_03610 at 3798.065 kb on - strand, within ECD_03610 at 3798.310 kb on - strand at 3798.403 kb on - strand, within ECD_03611 at 3798.403 kb on - strand, within ECD_03611 at 3798.420 kb on - strand, within ECD_03611 at 3798.420 kb on - strand, within ECD_03611 at 3798.420 kb on - strand, within ECD_03611 at 3798.420 kb on - strand, within ECD_03611 at 3798.444 kb on - strand, within ECD_03611 at 3798.444 kb on - strand, within ECD_03611 at 3798.444 kb on - strand, within ECD_03611 at 3798.559 kb on - strand, within ECD_03611 at 3798.754 kb on - strand, within ECD_03611 at 3799.227 kb on - strand at 3799.316 kb on - strand at 3799.490 kb on - strand, within ECD_03612 at 3799.490 kb on - strand, within ECD_03612 at 3799.499 kb on - strand, within ECD_03612 at 3799.499 kb on - strand, within ECD_03612 at 3799.610 kb on - strand, within ECD_03612 at 3799.655 kb on - strand, within ECD_03612 at 3799.660 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.666 kb on - strand, within ECD_03612 at 3799.760 kb on - strand, within ECD_03612 at 3799.769 kb on - strand, within ECD_03612 at 3799.769 kb on - strand, within ECD_03612 at 3799.810 kb on - strand, within ECD_03612 at 3799.810 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.857 kb on - strand, within ECD_03612 at 3799.942 kb on - strand, within ECD_03612 at 3799.942 kb on - strand, within ECD_03612 at 3799.942 kb on - strand, within ECD_03612 at 3799.961 kb on - strand, within ECD_03612 at 3800.108 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.145 kb on - strand, within ECD_03612 at 3800.155 kb on - strand, within ECD_03612 at 3800.159 kb on - strand, within ECD_03612 at 3800.159 kb on - strand, within ECD_03612 at 3800.159 kb on - strand, within ECD_03612 at 3800.185 kb on - strand, within ECD_03612
Per-strain Table
Position Strand Gene LocusTag Fraction Ox4 remove 3,797,417 - +0.9 3,797,427 - -0.1 3,797,480 - ECD_03610 0.14 +0.8 3,797,680 - ECD_03610 0.37 -0.5 3,797,923 - ECD_03610 0.64 -0.9 3,798,065 - ECD_03610 0.80 -0.9 3,798,065 - ECD_03610 0.80 +0.9 3,798,310 - +1.1 3,798,403 - ECD_03611 0.17 -1.5 3,798,403 - ECD_03611 0.17 +0.3 3,798,420 - ECD_03611 0.19 -1.3 3,798,420 - ECD_03611 0.19 -0.9 3,798,420 - ECD_03611 0.19 -0.6 3,798,420 - ECD_03611 0.19 -0.7 3,798,444 - ECD_03611 0.21 -0.3 3,798,444 - ECD_03611 0.21 +0.2 3,798,444 - ECD_03611 0.21 +0.1 3,798,559 - ECD_03611 0.33 -1.2 3,798,754 - ECD_03611 0.53 -0.3 3,799,227 - -0.3 3,799,316 - +0.1 3,799,490 - ECD_03612 0.20 +1.0 3,799,490 - ECD_03612 0.20 +0.9 3,799,499 - ECD_03612 0.20 -1.1 3,799,499 - ECD_03612 0.20 -1.3 3,799,610 - ECD_03612 0.31 -1.6 3,799,655 - ECD_03612 0.35 -1.1 3,799,660 - ECD_03612 0.36 -0.2 3,799,666 - ECD_03612 0.37 -1.6 3,799,666 - ECD_03612 0.37 -0.4 3,799,666 - ECD_03612 0.37 -0.1 3,799,666 - ECD_03612 0.37 -0.8 3,799,760 - ECD_03612 0.46 -0.6 3,799,769 - ECD_03612 0.46 -1.2 3,799,769 - ECD_03612 0.46 -1.9 3,799,810 - ECD_03612 0.50 -1.3 3,799,810 - ECD_03612 0.50 -0.5 3,799,857 - ECD_03612 0.55 -2.3 3,799,857 - ECD_03612 0.55 -1.8 3,799,857 - ECD_03612 0.55 +1.7 3,799,857 - ECD_03612 0.55 +0.5 3,799,942 - ECD_03612 0.63 -1.3 3,799,942 - ECD_03612 0.63 +0.2 3,799,942 - ECD_03612 0.63 -0.9 3,799,961 - ECD_03612 0.65 -1.6 3,800,108 - ECD_03612 0.79 -1.5 3,800,145 - ECD_03612 0.83 -0.5 3,800,145 - ECD_03612 0.83 +0.0 3,800,145 - ECD_03612 0.83 -1.3 3,800,145 - ECD_03612 0.83 -1.2 3,800,145 - ECD_03612 0.83 -0.9 3,800,155 - ECD_03612 0.83 -0.9 3,800,159 - ECD_03612 0.84 +0.1 3,800,159 - ECD_03612 0.84 +0.5 3,800,159 - ECD_03612 0.84 -1.3 3,800,185 - ECD_03612 0.86 -0.8
Or see this region's nucleotide sequence