Strain Fitness in Escherichia coli BL21 around ECD_03352

Experiment: Ox4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03351 and ECD_03352 are separated by 12 nucleotidesECD_03352 and ECD_03353 are separated by 628 nucleotides ECD_03351: ECD_03351 - arsenite/antimonite transporter, at 3,511,321 to 3,512,610 _03351 ECD_03352: ECD_03352 - arsenate reductase, at 3,512,623 to 3,513,048 _03352 ECD_03353: ECD_03353 - hypothetical protein, at 3,513,677 to 3,514,900 _03353 Position (kb) 3512 3513 3514Strain fitness (log2 ratio) -2 -1 0 1at 3511.901 kb on + strand, within ECD_03351at 3511.901 kb on + strand, within ECD_03351at 3511.901 kb on + strand, within ECD_03351at 3511.901 kb on + strand, within ECD_03351at 3511.901 kb on + strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.902 kb on - strand, within ECD_03351at 3511.936 kb on + strand, within ECD_03351at 3511.986 kb on + strand, within ECD_03351at 3511.986 kb on + strand, within ECD_03351at 3511.986 kb on + strand, within ECD_03351at 3511.987 kb on - strand, within ECD_03351at 3511.987 kb on - strand, within ECD_03351at 3511.987 kb on - strand, within ECD_03351at 3512.096 kb on + strand, within ECD_03351at 3512.096 kb on + strand, within ECD_03351at 3512.096 kb on + strand, within ECD_03351at 3512.097 kb on - strand, within ECD_03351at 3512.130 kb on + strand, within ECD_03351at 3512.137 kb on - strand, within ECD_03351at 3512.188 kb on + strand, within ECD_03351at 3512.188 kb on + strand, within ECD_03351at 3512.188 kb on + strand, within ECD_03351at 3512.188 kb on + strand, within ECD_03351at 3512.189 kb on - strand, within ECD_03351at 3512.189 kb on - strand, within ECD_03351at 3512.189 kb on - strand, within ECD_03351at 3512.201 kb on - strand, within ECD_03351at 3512.230 kb on + strand, within ECD_03351at 3512.319 kb on + strand, within ECD_03351at 3512.319 kb on + strand, within ECD_03351at 3512.319 kb on + strand, within ECD_03351at 3512.319 kb on + strand, within ECD_03351at 3512.320 kb on - strand, within ECD_03351at 3512.320 kb on - strand, within ECD_03351at 3512.320 kb on - strand, within ECD_03351at 3512.322 kb on + strand, within ECD_03351at 3512.331 kb on + strand, within ECD_03351at 3512.332 kb on - strand, within ECD_03351at 3512.407 kb on + strand, within ECD_03351at 3512.408 kb on - strand, within ECD_03351at 3512.472 kb on - strand, within ECD_03351at 3512.502 kb on + strandat 3512.508 kb on + strandat 3512.524 kb on + strandat 3512.524 kb on + strandat 3512.525 kb on - strandat 3512.525 kb on - strandat 3512.541 kb on + strandat 3512.608 kb on + strandat 3512.608 kb on + strandat 3512.616 kb on + strandat 3512.616 kb on + strandat 3512.617 kb on - strandat 3512.617 kb on - strandat 3512.622 kb on + strandat 3512.623 kb on - strandat 3512.634 kb on + strandat 3512.635 kb on - strandat 3512.641 kb on + strandat 3512.641 kb on + strandat 3512.641 kb on + strandat 3512.641 kb on + strandat 3512.641 kb on + strandat 3512.641 kb on + strandat 3512.642 kb on - strandat 3512.642 kb on - strandat 3512.642 kb on - strandat 3512.671 kb on - strand, within ECD_03352at 3512.674 kb on - strand, within ECD_03352at 3512.803 kb on - strand, within ECD_03352at 3512.818 kb on + strand, within ECD_03352at 3512.819 kb on - strand, within ECD_03352at 3513.156 kb on + strandat 3513.156 kb on + strandat 3513.159 kb on + strandat 3513.159 kb on + strandat 3513.210 kb on + strandat 3513.211 kb on - strandat 3513.259 kb on + strandat 3513.298 kb on - strandat 3513.298 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ox4
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3,511,901 + ECD_03351 0.45 -0.2
3,511,901 + ECD_03351 0.45 -0.1
3,511,901 + ECD_03351 0.45 +0.7
3,511,901 + ECD_03351 0.45 -0.3
3,511,901 + ECD_03351 0.45 -0.0
3,511,902 - ECD_03351 0.45 +0.1
3,511,902 - ECD_03351 0.45 -0.1
3,511,902 - ECD_03351 0.45 +1.7
3,511,902 - ECD_03351 0.45 +0.3
3,511,902 - ECD_03351 0.45 +0.4
3,511,902 - ECD_03351 0.45 +1.0
3,511,902 - ECD_03351 0.45 +0.5
3,511,902 - ECD_03351 0.45 +0.2
3,511,936 + ECD_03351 0.48 +0.5
3,511,986 + ECD_03351 0.52 -0.5
3,511,986 + ECD_03351 0.52 -1.4
3,511,986 + ECD_03351 0.52 -0.2
3,511,987 - ECD_03351 0.52 +1.2
3,511,987 - ECD_03351 0.52 +0.4
3,511,987 - ECD_03351 0.52 +1.0
3,512,096 + ECD_03351 0.60 +0.7
3,512,096 + ECD_03351 0.60 -0.9
3,512,096 + ECD_03351 0.60 +0.5
3,512,097 - ECD_03351 0.60 -1.0
3,512,130 + ECD_03351 0.63 +1.0
3,512,137 - ECD_03351 0.63 +1.2
3,512,188 + ECD_03351 0.67 -1.3
3,512,188 + ECD_03351 0.67 +0.9
3,512,188 + ECD_03351 0.67 +0.7
3,512,188 + ECD_03351 0.67 +0.7
3,512,189 - ECD_03351 0.67 -1.0
3,512,189 - ECD_03351 0.67 +0.3
3,512,189 - ECD_03351 0.67 -0.6
3,512,201 - ECD_03351 0.68 +1.2
3,512,230 + ECD_03351 0.70 +0.5
3,512,319 + ECD_03351 0.77 -0.2
3,512,319 + ECD_03351 0.77 -2.1
3,512,319 + ECD_03351 0.77 -1.7
3,512,319 + ECD_03351 0.77 -0.2
3,512,320 - ECD_03351 0.77 +0.4
3,512,320 - ECD_03351 0.77 -1.1
3,512,320 - ECD_03351 0.77 -0.6
3,512,322 + ECD_03351 0.78 +0.4
3,512,331 + ECD_03351 0.78 -0.1
3,512,332 - ECD_03351 0.78 +0.1
3,512,407 + ECD_03351 0.84 -2.3
3,512,408 - ECD_03351 0.84 +1.4
3,512,472 - ECD_03351 0.89 +0.4
3,512,502 + +0.8
3,512,508 + +0.3
3,512,524 + -0.4
3,512,524 + -0.0
3,512,525 - +0.6
3,512,525 - -0.2
3,512,541 + +1.2
3,512,608 + +0.1
3,512,608 + +0.1
3,512,616 + +1.1
3,512,616 + -0.4
3,512,617 - +0.5
3,512,617 - -0.7
3,512,622 + +0.5
3,512,623 - -0.5
3,512,634 + -0.6
3,512,635 - -0.7
3,512,641 + +0.2
3,512,641 + -1.9
3,512,641 + +1.0
3,512,641 + -1.6
3,512,641 + +1.4
3,512,641 + -1.2
3,512,642 - -0.7
3,512,642 - -0.3
3,512,642 - +0.6
3,512,671 - ECD_03352 0.11 +0.7
3,512,674 - ECD_03352 0.12 +0.7
3,512,803 - ECD_03352 0.42 +0.9
3,512,818 + ECD_03352 0.46 +0.9
3,512,819 - ECD_03352 0.46 -0.6
3,513,156 + +0.6
3,513,156 + +0.2
3,513,159 + -0.0
3,513,159 + -0.3
3,513,210 + -0.0
3,513,211 - -0.3
3,513,259 + +0.5
3,513,298 - +0.2
3,513,298 - +0.9

Or see this region's nucleotide sequence