Strain Fitness in Escherichia coli BL21 around ECD_03254

Experiment: Ox4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ox4
3,390,101	+				+0.3
3,390,127	+				-0.6
3,390,127	+				+0.3
3,390,128	-				-1.8
3,390,128	-				+1.7
3,390,153	+				-2.7
3,390,173	+				-0.6
3,390,173	+				+0.8
3,390,174	-				-0.8
3,390,174	-				-0.4
3,390,174	-				+0.2
3,390,353	+		ECD_03253	0.23	+0.1
3,390,487	+		ECD_03253	0.38	+1.0
3,390,487	+		ECD_03253	0.38	-0.7
3,390,488	-		ECD_03253	0.38	-0.4
3,390,536	+		ECD_03253	0.43	+0.0
3,390,537	-		ECD_03253	0.44	+0.9
3,390,580	+		ECD_03253	0.48	+2.7
3,390,580	+		ECD_03253	0.48	+0.6
3,390,586	-		ECD_03253	0.49	-0.3
3,390,635	+		ECD_03253	0.55	+0.6
3,390,635	+		ECD_03253	0.55	+0.5
3,390,660	+		ECD_03253	0.58	-0.5
3,390,661	-		ECD_03253	0.58	-0.7
3,390,674	+		ECD_03253	0.59	-1.4
3,390,674	+		ECD_03253	0.59	+0.2
3,390,675	-		ECD_03253	0.59	-0.0
3,390,790	+		ECD_03253	0.72	+1.0
3,390,962	-				+0.2
3,390,981	+				+0.4
3,390,981	+				+0.3
3,391,037	+				-0.1
3,391,037	+				+0.0
3,391,037	+				-0.2
3,391,038	-				-0.5
3,391,038	-				+0.8
3,391,038	-				+0.1
3,391,069	-				+1.0
3,391,074	+				-1.6
3,391,077	+				-0.6
3,391,078	-				-0.2
3,391,078	-				+0.5
3,391,078	-				-0.5
3,391,078	-				+1.4
3,391,078	-				+0.4
3,391,078	-				-0.4
3,391,134	+				-0.8
3,391,134	+				+3.0
3,391,134	+				+0.8
3,391,134	+				+0.3
3,391,154	+				+0.1
3,391,209	+				-0.6
3,391,210	-				+0.4
3,391,233	-				-1.3
3,391,274	-		ECD_03254	0.10	+0.1
3,391,274	-		ECD_03254	0.10	-1.3
3,391,391	-		ECD_03254	0.17	+0.2
3,391,452	+		ECD_03254	0.21	+0.6
3,391,452	+		ECD_03254	0.21	+0.9
3,391,452	+		ECD_03254	0.21	-0.5
3,391,452	+		ECD_03254	0.21	+0.2
3,391,512	+		ECD_03254	0.24	-0.4
3,391,513	-		ECD_03254	0.24	-1.2
3,391,513	-		ECD_03254	0.24	-0.5
3,391,513	-		ECD_03254	0.24	+0.2
3,391,621	+		ECD_03254	0.30	+0.2
3,391,621	+		ECD_03254	0.30	-1.2
3,391,621	+		ECD_03254	0.30	+0.1
3,391,621	+		ECD_03254	0.30	-0.1
3,391,622	-		ECD_03254	0.31	+0.1
3,391,622	-		ECD_03254	0.31	-0.4
3,391,622	-		ECD_03254	0.31	-0.3
3,391,622	-		ECD_03254	0.31	-0.6
3,391,622	-		ECD_03254	0.31	-2.1
3,391,625	+		ECD_03254	0.31	+0.7
3,391,625	+		ECD_03254	0.31	+0.8
3,391,625	+		ECD_03254	0.31	-0.6
3,391,625	+		ECD_03254	0.31	-0.3
3,391,626	-		ECD_03254	0.31	-0.3
3,391,626	-		ECD_03254	0.31	-1.3
3,391,626	-		ECD_03254	0.31	+0.2
3,391,626	-		ECD_03254	0.31	-1.6
3,391,630	-		ECD_03254	0.31	-0.1
3,391,630	-		ECD_03254	0.31	+0.6
3,391,661	-		ECD_03254	0.33	-1.1
3,391,694	+		ECD_03254	0.35	-1.0
3,391,715	+		ECD_03254	0.36	+0.9
3,391,715	+		ECD_03254	0.36	-2.0
3,391,716	-		ECD_03254	0.36	+0.1
3,391,716	-		ECD_03254	0.36	-2.4
3,391,716	-		ECD_03254	0.36	+1.3
3,391,728	+		ECD_03254	0.37	+0.0
3,391,729	-		ECD_03254	0.37	-0.0
3,391,754	+		ECD_03254	0.38	+0.4
3,391,933	+		ECD_03254	0.49	-0.0
3,391,934	-		ECD_03254	0.49	-0.2
3,391,934	-		ECD_03254	0.49	-0.4
3,391,961	+		ECD_03254	0.50	-0.1
3,392,021	+		ECD_03254	0.54	-0.4
3,392,022	-		ECD_03254	0.54	-0.9
3,392,146	-		ECD_03254	0.61	+0.1
3,392,146	-		ECD_03254	0.61	+0.7
3,392,146	-		ECD_03254	0.61	+0.3
3,392,149	-		ECD_03254	0.61	-0.6
3,392,193	-		ECD_03254	0.64	+0.6
3,392,254	-		ECD_03254	0.67	+0.2
3,392,254	-		ECD_03254	0.67	-1.7
3,392,254	-		ECD_03254	0.67	-0.6
3,392,267	+		ECD_03254	0.68	+0.4
3,392,268	-		ECD_03254	0.68	-0.0
3,392,268	-		ECD_03254	0.68	-0.4
3,392,340	+		ECD_03254	0.72	-0.7
3,392,389	-		ECD_03254	0.75	+0.7
3,392,391	-		ECD_03254	0.75	-0.4
3,392,395	-		ECD_03254	0.75	-2.0
3,392,467	-		ECD_03254	0.80	+0.9
3,392,503	+		ECD_03254	0.82	-1.9
3,392,504	-		ECD_03254	0.82	-0.6
3,392,872	-				-0.6
3,392,872	-				-2.1
3,392,872	-				-0.3
3,392,872	-				+0.9
3,392,991	+				-0.7
3,392,992	-				+1.0
3,393,052	+				+0.4
3,393,052	+				+0.4
3,393,115	+				-0.7
3,393,116	-				+0.1
3,393,121	+				+0.8
3,393,122	-				+0.1
3,393,159	+				+0.4
3,393,162	+				+0.5
3,393,162	+				-1.0
3,393,173	+				-0.5
3,393,173	+				-0.3
3,393,173	+				+0.5
3,393,173	+				-0.2
3,393,173	+				-0.5
3,393,173	+				-0.3
3,393,173	+				-1.8
3,393,173	+				-0.9
3,393,177	+				+0.5
3,393,207	-				-0.5
3,393,240	+				+0.4
3,393,240	+				-3.5
3,393,240	+				+0.8
3,393,241	-				-0.6
3,393,241	-				-0.5
3,393,246	-				-0.1
3,393,256	+				-0.2
3,393,256	+				-0.2
3,393,256	+				+0.2
3,393,257	-				-0.5
3,393,257	-				-2.1
3,393,270	+				+2.9
3,393,282	+				+0.3
3,393,347	+				-0.2
3,393,348	-				+1.5
3,393,348	-				-0.4
3,393,404	+		ECD_03255	0.13	-0.3
3,393,408	+		ECD_03255	0.13	-0.9
3,393,408	+		ECD_03255	0.13	-0.8
3,393,408	+		ECD_03255	0.13	-0.6
3,393,408	+		ECD_03255	0.13	-0.4
3,393,408	+		ECD_03255	0.13	+0.5
3,393,408	+		ECD_03255	0.13	+2.1
3,393,408	+		ECD_03255	0.13	-0.1
3,393,408	+		ECD_03255	0.13	-0.1
3,393,409	-		ECD_03255	0.13	+0.4
3,393,409	-		ECD_03255	0.13	+0.6
3,393,409	-		ECD_03255	0.13	+1.1
3,393,409	-		ECD_03255	0.13	+0.2
3,393,410	+		ECD_03255	0.13	-0.5
3,393,410	+		ECD_03255	0.13	+0.2
3,393,467	+		ECD_03255	0.17	+0.2
3,393,468	-		ECD_03255	0.17	-1.2
3,393,468	-		ECD_03255	0.17	-1.5