Strain Fitness in Escherichia coli BL21 around ECD_03105

Experiment: Ox4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ox4
3,252,697	+		ECD_03104	0.66	-0.5
3,252,697	+		ECD_03104	0.66	+1.4
3,252,729	+		ECD_03104	0.68	+0.4
3,252,759	-		ECD_03104	0.71	-0.4
3,252,817	-		ECD_03104	0.75	-0.3
3,252,825	-		ECD_03104	0.75	+0.3
3,252,827	-		ECD_03104	0.75	+0.6
3,252,827	-		ECD_03104	0.75	+1.0
3,252,827	-		ECD_03104	0.75	+0.1
3,252,827	-		ECD_03104	0.75	+0.1
3,252,827	-		ECD_03104	0.75	-0.7
3,252,827	-		ECD_03104	0.75	+0.2
3,252,827	-		ECD_03104	0.75	+0.7
3,252,827	-		ECD_03104	0.75	+0.5
3,252,878	+		ECD_03104	0.79	+0.0
3,252,879	-		ECD_03104	0.79	-0.8
3,253,006	+		ECD_03104	0.88	+0.4
3,253,006	+		ECD_03104	0.88	-0.4
3,253,007	-		ECD_03104	0.88	-0.9
3,253,007	-		ECD_03104	0.88	+0.6
3,253,020	-		ECD_03104	0.89	+0.7
3,253,054	+				+0.4
3,253,055	-				+2.2
3,253,167	+				-0.3
3,253,201	+				+1.6
3,253,202	-				+0.5
3,253,205	+				-1.3
3,253,213	+				-1.0
3,253,214	-				+0.7
3,253,214	-				-1.2
3,253,269	+				-0.8
3,253,355	+				+2.6
3,253,361	+				+0.0
3,253,361	+				-1.5
3,253,361	+				-0.3
3,253,361	+				+1.0
3,253,375	-				-0.3
3,253,383	+				+1.2
3,253,384	-				+0.7
3,253,537	+				+1.2
3,253,543	+				+1.5
3,253,581	-				-0.2
3,253,597	+				+0.1
3,253,733	+				-0.5
3,253,734	-				-1.7
3,253,920	-				-1.0
3,253,932	-				-1.3
3,253,964	-				-2.7
3,254,006	+		ECD_03105	0.10	-1.9
3,254,023	-		ECD_03105	0.11	-3.5
3,254,023	-		ECD_03105	0.11	-1.7
3,254,096	+		ECD_03105	0.13	-1.1
3,254,145	-		ECD_03105	0.14	-1.4
3,254,352	-		ECD_03105	0.19	-1.1
3,254,369	+		ECD_03105	0.20	-0.8
3,254,369	+		ECD_03105	0.20	-1.0
3,254,370	-		ECD_03105	0.20	-1.5
3,254,370	-		ECD_03105	0.20	-0.7
3,254,425	-		ECD_03105	0.21	-1.0
3,254,425	-		ECD_03105	0.21	-2.0
3,254,524	+		ECD_03105	0.24	-1.0
3,254,524	+		ECD_03105	0.24	-0.9
3,254,524	+		ECD_03105	0.24	-2.8
3,254,525	-		ECD_03105	0.24	-0.7
3,254,527	+		ECD_03105	0.24	-1.5
3,254,564	+		ECD_03105	0.25	+0.2
3,254,642	+		ECD_03105	0.27	-1.3
3,254,681	+		ECD_03105	0.28	-2.1
3,254,687	+		ECD_03105	0.28	-1.4
3,254,687	+		ECD_03105	0.28	-1.5
3,254,688	-		ECD_03105	0.28	-0.7
3,254,688	-		ECD_03105	0.28	-2.5
3,254,688	-		ECD_03105	0.28	-2.2
3,254,688	-		ECD_03105	0.28	-1.1
3,254,692	-		ECD_03105	0.28	-2.0
3,254,697	+		ECD_03105	0.28	-1.3
3,254,697	+		ECD_03105	0.28	-1.8
3,254,697	+		ECD_03105	0.28	-0.8
3,254,698	-		ECD_03105	0.29	-1.8
3,254,698	-		ECD_03105	0.29	-1.4
3,254,698	-		ECD_03105	0.29	-1.8
3,254,789	+		ECD_03105	0.31	-0.8
3,254,789	+		ECD_03105	0.31	+0.8
3,254,790	-		ECD_03105	0.31	+0.0
3,254,790	-		ECD_03105	0.31	-1.1
3,254,835	-		ECD_03105	0.32	-0.3
3,254,852	+		ECD_03105	0.33	-3.4
3,254,852	+		ECD_03105	0.33	-1.5
3,254,853	-		ECD_03105	0.33	-2.5
3,255,042	+		ECD_03105	0.38	-0.6
3,255,056	-		ECD_03105	0.38	-2.3
3,255,056	-		ECD_03105	0.38	-2.3
3,255,056	-		ECD_03105	0.38	-1.1
3,255,074	-		ECD_03105	0.38	-1.9
3,255,174	-		ECD_03105	0.41	-0.5
3,255,193	-		ECD_03105	0.42	-0.8
3,255,294	-		ECD_03105	0.44	-1.0
3,255,357	-		ECD_03105	0.46	-3.6
3,255,360	-		ECD_03105	0.46	-1.6
3,255,360	-		ECD_03105	0.46	-1.0
3,255,421	-		ECD_03105	0.48	-2.3
3,255,421	-		ECD_03105	0.48	-0.3
3,255,531	-		ECD_03105	0.50	-0.7
3,255,565	+		ECD_03105	0.51	-0.7
3,255,590	+		ECD_03105	0.52	-2.3
3,255,636	+		ECD_03105	0.53	-0.5
3,255,636	+		ECD_03105	0.53	+0.1
3,255,637	-		ECD_03105	0.53	-1.6
3,255,650	+		ECD_03105	0.54	-0.4
3,255,651	-		ECD_03105	0.54	-0.3
3,255,674	+		ECD_03105	0.54	-1.5
3,255,675	-		ECD_03105	0.54	-1.8
3,255,678	+		ECD_03105	0.54	-2.2
3,255,759	-		ECD_03105	0.56	-0.0
3,255,760	+		ECD_03105	0.56	-1.2
3,255,761	-		ECD_03105	0.56	-1.3
3,255,835	-		ECD_03105	0.58	-2.3
3,255,835	-		ECD_03105	0.58	-2.9
3,255,835	-		ECD_03105	0.58	-0.9
3,255,835	-		ECD_03105	0.58	-1.0
3,255,839	-		ECD_03105	0.59	-1.4
3,255,854	+		ECD_03105	0.59	-1.0
3,256,004	+		ECD_03105	0.63	-2.1
3,256,050	+		ECD_03105	0.64	-2.4
3,256,052	+		ECD_03105	0.64	+0.8
3,256,103	-		ECD_03105	0.65	-1.1
3,256,287	-		ECD_03105	0.70	-2.2
3,256,359	+		ECD_03105	0.72	-1.1
3,256,551	-		ECD_03105	0.77	-0.8
3,256,554	-		ECD_03105	0.77	-3.6
3,256,584	-		ECD_03105	0.78	-1.3
3,256,584	-		ECD_03105	0.78	+0.0
3,256,648	-		ECD_03105	0.80	-0.8
3,256,648	-		ECD_03105	0.80	-1.3
3,256,861	-		ECD_03105	0.85	-1.0
3,257,114	+				-1.5
3,257,115	-				-1.8
3,257,118	+				-1.2
3,257,118	+				-2.8
3,257,119	-				-1.9
3,257,119	-				-2.0
3,257,119	-				-0.9
3,257,119	-				+1.3
3,257,184	+				-1.7
3,257,283	+				-0.7
3,257,333	+				-1.3
3,257,484	-				+1.0
3,257,484	-				+2.0
3,257,484	-				+1.0
3,257,492	-				+0.3
3,257,516	+				+0.1
3,257,517	-				-0.5
3,257,517	-				-0.5
3,257,624	+				+0.0
3,257,625	-				-1.5
3,257,625	-				-0.5
3,257,649	-		ECD_03106	0.11	-0.0
3,257,688	-		ECD_03106	0.14	+0.9
3,257,688	-		ECD_03106	0.14	+0.4
3,257,688	-		ECD_03106	0.14	-0.4
3,257,692	+		ECD_03106	0.14	-0.8
3,257,752	+		ECD_03106	0.18	-0.7
3,257,752	+		ECD_03106	0.18	-0.4
3,257,752	+		ECD_03106	0.18	-0.4
3,257,752	+		ECD_03106	0.18	-1.0
3,257,753	-		ECD_03106	0.18	+1.1
3,257,753	-		ECD_03106	0.18	+0.6
3,257,753	-		ECD_03106	0.18	+0.6
3,257,753	-		ECD_03106	0.18	+1.4
3,257,753	-		ECD_03106	0.18	+0.4
3,257,753	-		ECD_03106	0.18	-1.4
3,257,896	-		ECD_03106	0.28	+0.0
3,257,937	+		ECD_03106	0.31	-1.0
3,258,100	+		ECD_03106	0.42	-2.1
3,258,227	-		ECD_03106	0.51	+0.5
3,258,237	-		ECD_03106	0.51	-1.3
3,258,237	-		ECD_03106	0.51	+0.1
3,258,364	-		ECD_03106	0.60	-0.3