Strain Fitness in Escherichia coli BL21 around ECD_03011

Experiment: Ox4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ox4
3,156,353	-		ECD_03009	0.73	+2.2
3,156,365	-		ECD_03009	0.75	-0.2
3,156,365	-		ECD_03009	0.75	+1.7
3,156,425	+		ECD_03009	0.86	+0.2
3,156,426	-		ECD_03009	0.86	-0.9
3,156,428	+		ECD_03009	0.86	-0.4
3,156,428	+		ECD_03009	0.86	+1.7
3,156,428	+		ECD_03009	0.86	-0.3
3,156,429	-		ECD_03009	0.86	-0.0
3,156,429	-		ECD_03009	0.86	+0.2
3,156,429	-		ECD_03009	0.86	+0.3
3,156,429	-		ECD_03009	0.86	+1.4
3,156,433	-		ECD_03009	0.87	+0.0
3,156,489	+				+0.0
3,156,490	-				+0.3
3,156,490	-				+0.6
3,156,509	+				+0.2
3,156,509	+				+0.1
3,156,509	+				-0.5
3,156,514	+				-1.5
3,156,568	+				+0.1
3,156,569	-				-0.2
3,156,584	-				-0.4
3,156,614	-				+0.2
3,156,614	-				+0.2
3,156,629	+				+0.8
3,156,630	-				+0.5
3,156,690	+		ECD_03010	0.15	-1.4
3,156,770	-		ECD_03010	0.26	+0.3
3,156,773	+		ECD_03010	0.27	+0.3
3,156,778	+		ECD_03010	0.27	-0.3
3,156,779	-		ECD_03010	0.27	-0.4
3,156,779	-		ECD_03010	0.27	-0.1
3,156,779	-		ECD_03010	0.27	+1.4
3,156,786	-		ECD_03010	0.28	+1.5
3,156,807	-		ECD_03010	0.31	-0.7
3,157,083	-		ECD_03010	0.71	-0.1
3,157,084	+		ECD_03010	0.71	+0.1
3,157,181	+		ECD_03010	0.85	-0.4
3,157,181	+		ECD_03010	0.85	+0.2
3,157,189	+		ECD_03010	0.86	-0.1
3,157,339	+				-0.5
3,157,440	-				-0.2
3,157,443	-				-0.7
3,157,527	+				-0.3
3,157,645	-		ECD_03011	0.13	+0.3
3,157,738	+		ECD_03011	0.17	-0.3
3,157,821	-		ECD_03011	0.20	+1.8
3,157,850	-		ECD_03011	0.21	+0.2
3,157,850	-		ECD_03011	0.21	-0.7
3,157,852	-		ECD_03011	0.21	-0.8
3,157,865	-		ECD_03011	0.22	-0.8
3,157,871	+		ECD_03011	0.22	-0.8
3,157,871	+		ECD_03011	0.22	+0.3
3,157,871	+		ECD_03011	0.22	+0.7
3,157,880	-		ECD_03011	0.23	-0.1
3,157,979	+		ECD_03011	0.26	-0.2
3,157,980	-		ECD_03011	0.26	+0.3
3,158,029	+		ECD_03011	0.28	+0.7
3,158,029	+		ECD_03011	0.28	-0.5
3,158,030	-		ECD_03011	0.28	+0.2
3,158,033	+		ECD_03011	0.29	-0.3
3,158,152	+		ECD_03011	0.33	+2.5
3,158,152	+		ECD_03011	0.33	-0.3
3,158,152	+		ECD_03011	0.33	-0.2
3,158,152	+		ECD_03011	0.33	+3.4
3,158,224	+		ECD_03011	0.36	-0.4
3,158,225	-		ECD_03011	0.36	+2.8
3,158,240	+		ECD_03011	0.37	+0.2
3,158,241	-		ECD_03011	0.37	-0.7
3,158,250	-		ECD_03011	0.37	+0.2
3,158,250	-		ECD_03011	0.37	-1.0
3,158,348	-		ECD_03011	0.41	+2.7
3,158,362	+		ECD_03011	0.42	-0.2
3,158,372	+		ECD_03011	0.42	-0.5
3,158,372	+		ECD_03011	0.42	-1.6
3,158,410	-		ECD_03011	0.44	+2.0
3,158,414	+		ECD_03011	0.44	+0.1
3,158,416	+		ECD_03011	0.44	+0.6
3,158,417	-		ECD_03011	0.44	+0.1
3,158,417	-		ECD_03011	0.44	+0.5
3,158,459	-		ECD_03011	0.46	+0.8
3,158,493	+		ECD_03011	0.47	-0.8
3,158,494	-		ECD_03011	0.47	-0.5
3,158,494	-		ECD_03011	0.47	+0.4
3,158,494	-		ECD_03011	0.47	-0.5
3,158,494	-		ECD_03011	0.47	-0.0
3,158,494	-		ECD_03011	0.47	+0.1
3,158,495	+		ECD_03011	0.47	-1.2
3,158,496	-		ECD_03011	0.47	-0.2
3,158,496	-		ECD_03011	0.47	-1.2
3,158,496	-		ECD_03011	0.47	-0.7
3,158,509	+		ECD_03011	0.48	+0.2
3,158,510	-		ECD_03011	0.48	-0.6
3,158,515	+		ECD_03011	0.48	-0.5
3,158,515	+		ECD_03011	0.48	+3.2
3,158,523	-		ECD_03011	0.48	-0.1
3,158,678	+		ECD_03011	0.54	-0.2
3,158,678	+		ECD_03011	0.54	+0.7
3,158,679	-		ECD_03011	0.54	-1.5
3,158,735	-		ECD_03011	0.56	-0.4
3,158,747	+		ECD_03011	0.57	-0.2
3,158,748	-		ECD_03011	0.57	+0.3
3,158,759	-		ECD_03011	0.57	+1.5
3,158,788	+		ECD_03011	0.59	+0.1
3,158,788	+		ECD_03011	0.59	+0.3
3,158,789	-		ECD_03011	0.59	+0.6
3,158,855	+		ECD_03011	0.61	+3.1
3,158,855	+		ECD_03011	0.61	+2.6
3,158,856	-		ECD_03011	0.61	-1.1
3,158,856	-		ECD_03011	0.61	+1.0
3,158,880	-		ECD_03011	0.62	-0.2
3,158,880	-		ECD_03011	0.62	-0.4
3,158,890	+		ECD_03011	0.63	+0.2
3,158,960	+		ECD_03011	0.65	+0.2
3,158,990	-		ECD_03011	0.67	-0.5
3,159,059	+		ECD_03011	0.69	+0.1
3,159,143	+		ECD_03011	0.73	+0.5
3,159,143	+		ECD_03011	0.73	+0.1
3,159,143	+		ECD_03011	0.73	+0.3
3,159,143	+		ECD_03011	0.73	+0.7
3,159,144	-		ECD_03011	0.73	-1.9
3,159,144	-		ECD_03011	0.73	-0.2
3,159,144	-		ECD_03011	0.73	+0.8
3,159,181	+		ECD_03011	0.74	+0.7
3,159,181	+		ECD_03011	0.74	+0.2
3,159,188	-		ECD_03011	0.74	+0.2
3,159,215	+		ECD_03011	0.76	-0.8
3,159,347	-		ECD_03011	0.81	-1.7
3,159,469	+		ECD_03011	0.86	+0.1
3,159,469	+		ECD_03011	0.86	-1.4
3,159,469	+		ECD_03011	0.86	-0.7
3,159,470	-		ECD_03011	0.86	+1.7
3,159,470	-		ECD_03011	0.86	+0.4
3,159,470	-		ECD_03011	0.86	+1.2
3,159,472	+		ECD_03011	0.86	-0.1
3,159,473	-		ECD_03011	0.86	+1.4
3,159,579	+				+0.3
3,159,579	+				+0.9
3,159,586	+				+0.5
3,159,586	+				-1.5
3,159,608	-				+1.2
3,159,661	+				-0.7
3,159,662	-				-0.9
3,159,681	+				-0.0
3,159,682	-				-0.6
3,159,682	-				+0.9
3,159,682	-				-1.0
3,159,684	+				+0.7
3,159,684	+				+0.1
3,159,684	+				+1.2
3,159,684	+				-0.2
3,159,684	+				+4.2
3,159,684	+				+1.6
3,159,685	-				+0.2
3,159,685	-				+0.2
3,159,685	-				-0.9
3,159,685	-				+0.8
3,159,685	-				-0.8
3,159,685	-				-0.7
3,159,685	-				-0.1
3,159,685	-				-0.6
3,159,685	-				-0.2
3,159,685	-				+0.3
3,159,686	+				-0.1
3,159,686	+				+0.2
3,159,686	+				-0.9
3,159,687	-				-0.0
3,159,687	-				+0.6
3,159,687	-				+0.1
3,159,687	-				-0.7
3,159,726	+				+2.3
3,159,770	-				-0.7
3,159,772	+				+0.5
3,159,773	-				+0.2
3,159,791	-				+1.1
3,159,804	+				-0.4
3,159,804	+				+0.5
3,159,805	-				-0.8
3,159,805	-				-0.2
3,159,805	-				+0.7
3,159,857	+				+0.5
3,159,857	+				-1.1
3,159,858	-				+0.0
3,159,858	-				+0.1
3,159,859	+				-1.0
3,159,860	-				-0.1
3,159,894	+				-0.4
3,159,895	-				-0.7
3,159,945	+				+0.8
3,160,022	-		ECD_03012	0.17	-0.2
3,160,025	+		ECD_03012	0.17	-0.6
3,160,032	-		ECD_03012	0.18	+0.4
3,160,032	-		ECD_03012	0.18	-0.7
3,160,041	+		ECD_03012	0.18	+1.1
3,160,041	+		ECD_03012	0.18	+0.1
3,160,041	+		ECD_03012	0.18	+1.3
3,160,041	+		ECD_03012	0.18	-2.1
3,160,042	-		ECD_03012	0.18	+0.2
3,160,083	+		ECD_03012	0.22	-0.7
3,160,083	+		ECD_03012	0.22	-0.6
3,160,083	+		ECD_03012	0.22	-0.1
3,160,084	-		ECD_03012	0.22	+0.4
3,160,084	-		ECD_03012	0.22	-0.6
3,160,084	-		ECD_03012	0.22	-0.5
3,160,084	-		ECD_03012	0.22	+0.6
3,160,084	-		ECD_03012	0.22	-0.2
3,160,085	+		ECD_03012	0.22	+0.6
3,160,085	+		ECD_03012	0.22	+1.9
3,160,086	-		ECD_03012	0.23	-1.8
3,160,100	-		ECD_03012	0.24	-1.2
3,160,103	+		ECD_03012	0.24	+0.5
3,160,103	+		ECD_03012	0.24	+0.5
3,160,103	+		ECD_03012	0.24	-0.4
3,160,104	-		ECD_03012	0.24	+0.5
3,160,129	-		ECD_03012	0.26	+1.1
3,160,132	-		ECD_03012	0.27	+0.1
3,160,157	+		ECD_03012	0.29	+0.7
3,160,158	-		ECD_03012	0.29	+2.3
3,160,217	+		ECD_03012	0.35	-0.3
3,160,238	-		ECD_03012	0.36	-0.6
3,160,238	-		ECD_03012	0.36	+0.9
3,160,252	+		ECD_03012	0.38	-0.0
3,160,252	+		ECD_03012	0.38	-0.4
3,160,252	+		ECD_03012	0.38	+0.2
3,160,255	-		ECD_03012	0.38	+3.0
3,160,292	+		ECD_03012	0.41	+0.3
3,160,292	+		ECD_03012	0.41	+2.5
3,160,292	+		ECD_03012	0.41	+1.2
3,160,293	-		ECD_03012	0.41	+0.4
3,160,460	-		ECD_03012	0.57	-0.3
3,160,460	-		ECD_03012	0.57	+0.9
3,160,527	-		ECD_03012	0.63	-1.2
3,160,530	-		ECD_03012	0.63	-0.5
3,160,530	-		ECD_03012	0.63	-0.5
3,160,620	+		ECD_03012	0.71	-0.7
3,160,620	+		ECD_03012	0.71	+0.8
3,160,620	+		ECD_03012	0.71	+0.3
3,160,620	+		ECD_03012	0.71	+0.4
3,160,621	-		ECD_03012	0.72	+0.2
3,160,621	-		ECD_03012	0.72	-1.6
3,160,621	-		ECD_03012	0.72	-0.1
3,160,621	-		ECD_03012	0.72	+0.5
3,160,635	-		ECD_03012	0.73	+0.1
3,160,677	-		ECD_03012	0.77	-0.3
3,160,690	+		ECD_03012	0.78	-1.0
3,160,690	+		ECD_03012	0.78	+0.2
3,160,691	-		ECD_03012	0.78	-1.8
3,160,698	+		ECD_03012	0.79	-0.9
3,160,784	+		ECD_03012	0.86	-2.6
3,160,784	+		ECD_03012	0.86	-2.2
3,160,785	-		ECD_03012	0.87	+0.3