Strain Fitness in Escherichia coli BL21 around ECD_02659

Experiment: Ox4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ox4
2,779,008	-		ECD_02657	0.53	+2.4
2,779,008	-		ECD_02657	0.53	-0.6
2,779,009	+		ECD_02657	0.53	-0.7
2,779,009	+		ECD_02657	0.53	-1.3
2,779,009	+		ECD_02657	0.53	-0.4
2,779,009	+		ECD_02657	0.53	-0.9
2,779,010	-		ECD_02657	0.53	-1.0
2,779,010	-		ECD_02657	0.53	-1.1
2,779,010	-		ECD_02657	0.53	+3.9
2,779,010	-		ECD_02657	0.53	-0.3
2,779,010	-		ECD_02657	0.53	-0.3
2,779,010	-		ECD_02657	0.53	-0.1
2,779,010	-		ECD_02657	0.53	-0.9
2,779,010	-		ECD_02657	0.53	-1.9
2,779,010	-		ECD_02657	0.53	-1.0
2,779,010	-		ECD_02657	0.53	+0.1
2,779,010	-		ECD_02657	0.53	-0.8
2,779,034	-		ECD_02657	0.55	-3.1
2,779,034	-		ECD_02657	0.55	-1.1
2,779,034	-		ECD_02657	0.55	-1.8
2,779,034	-		ECD_02657	0.55	-0.5
2,779,039	+		ECD_02657	0.56	-1.8
2,779,048	+		ECD_02657	0.57	-0.9
2,779,048	+		ECD_02657	0.57	+0.0
2,779,048	+		ECD_02657	0.57	-1.2
2,779,049	-		ECD_02657	0.57	+0.4
2,779,049	-		ECD_02657	0.57	-0.6
2,779,068	-		ECD_02657	0.59	-0.6
2,779,074	+		ECD_02657	0.59	+5.0
2,779,074	+		ECD_02657	0.59	+0.6
2,779,074	+		ECD_02657	0.59	+0.1
2,779,075	-		ECD_02657	0.59	-0.6
2,779,075	-		ECD_02657	0.59	-1.5
2,779,075	-		ECD_02657	0.59	-0.3
2,779,075	-		ECD_02657	0.59	-1.5
2,779,075	-		ECD_02657	0.59	+0.3
2,779,075	-		ECD_02657	0.59	-0.9
2,779,075	-		ECD_02657	0.59	-2.9
2,779,075	-		ECD_02657	0.59	+0.4
2,779,075	-		ECD_02657	0.59	-0.2
2,779,106	-		ECD_02657	0.62	-1.3
2,779,234	-		ECD_02657	0.74	-0.5
2,779,236	+		ECD_02657	0.74	-1.1
2,779,236	+		ECD_02657	0.74	-1.4
2,779,236	+		ECD_02657	0.74	+0.8
2,779,268	+		ECD_02657	0.77	+0.3
2,779,269	-		ECD_02657	0.77	-1.6
2,779,269	-		ECD_02657	0.77	-0.7
2,779,269	-		ECD_02657	0.77	-0.3
2,779,360	-		ECD_02657	0.85	-0.4
2,779,402	+		ECD_02657	0.89	-0.1
2,779,402	+		ECD_02657	0.89	+0.6
2,779,509	+				+0.9
2,779,509	+				-0.3
2,779,509	+				-0.2
2,779,509	+				-0.5
2,779,510	-				-1.4
2,779,510	-				-0.4
2,779,510	-				+3.3
2,779,510	-				+1.2
2,779,510	-				-0.0
2,779,510	-				-1.6
2,779,510	-				-0.3
2,779,510	-				-0.7
2,779,510	-				+0.4
2,779,518	-				-0.8
2,779,518	-				-1.0
2,779,528	+				-0.6
2,779,528	+				+0.7
2,779,529	-				-1.8
2,779,529	-				+1.3
2,779,561	+		ECD_02658	0.11	-0.3
2,779,562	-		ECD_02658	0.12	-0.7
2,779,562	-		ECD_02658	0.12	-1.8
2,779,562	-		ECD_02658	0.12	-1.1
2,779,562	-		ECD_02658	0.12	-0.2
2,779,562	-		ECD_02658	0.12	+3.0
2,779,562	-		ECD_02658	0.12	+0.1
2,779,562	-		ECD_02658	0.12	-0.3
2,779,650	-		ECD_02658	0.34	+2.2
2,779,695	+		ECD_02658	0.45	+1.8
2,779,704	-		ECD_02658	0.47	-0.1
2,779,748	-		ECD_02658	0.59	+3.8
2,779,748	-		ECD_02658	0.59	+0.6
2,779,748	-		ECD_02658	0.59	-0.6
2,779,748	-		ECD_02658	0.59	+0.5
2,779,748	-		ECD_02658	0.59	+2.9
2,779,762	-		ECD_02658	0.62	-2.9
2,779,775	+		ECD_02658	0.65	-0.2
2,779,775	+		ECD_02658	0.65	-0.6
2,779,776	-		ECD_02658	0.66	+0.2
2,779,824	+		ECD_02658	0.78	-0.3
2,779,825	-		ECD_02658	0.78	-0.6
2,779,825	-		ECD_02658	0.78	-0.2
2,779,825	-		ECD_02658	0.78	-0.2
2,779,829	-		ECD_02658	0.79	+0.2
2,779,829	-		ECD_02658	0.79	-0.4
2,779,896	+				-1.1
2,779,896	+				+0.5
2,779,896	+				-0.6
2,779,897	-				-0.5
2,779,897	-				-0.2
2,779,897	-				+0.5
2,779,897	-				-0.5
2,779,897	-				-0.6
2,779,922	+				-0.9
2,779,923	-				+0.7
2,779,927	-				-1.4
2,779,932	-				-1.2
2,780,046	-		ECD_02659	0.13	-1.4
2,780,046	-		ECD_02659	0.13	+1.3
2,780,046	-		ECD_02659	0.13	-2.0
2,780,128	-		ECD_02659	0.22	-3.1
2,780,215	-		ECD_02659	0.31	-2.7
2,780,215	-		ECD_02659	0.31	-3.5
2,780,239	-		ECD_02659	0.34	-2.5
2,780,239	-		ECD_02659	0.34	-2.8
2,780,240	+		ECD_02659	0.34	-3.2
2,780,240	+		ECD_02659	0.34	-1.1
2,780,240	+		ECD_02659	0.34	-1.4
2,780,240	+		ECD_02659	0.34	-1.5
2,780,241	-		ECD_02659	0.34	+0.9
2,780,241	-		ECD_02659	0.34	-1.9
2,780,241	-		ECD_02659	0.34	-2.6
2,780,241	-		ECD_02659	0.34	-2.2
2,780,241	-		ECD_02659	0.34	+1.3
2,780,241	-		ECD_02659	0.34	-3.6
2,780,273	-		ECD_02659	0.37	+0.7
2,780,273	-		ECD_02659	0.37	-4.1
2,780,273	-		ECD_02659	0.37	-3.0
2,780,273	-		ECD_02659	0.37	-2.1
2,780,273	-		ECD_02659	0.37	+0.6
2,780,276	-		ECD_02659	0.38	-3.3
2,780,276	-		ECD_02659	0.38	-3.5
2,780,281	-		ECD_02659	0.38	-3.1
2,780,281	-		ECD_02659	0.38	-3.3
2,780,281	-		ECD_02659	0.38	-0.8
2,780,354	-		ECD_02659	0.46	-0.5
2,780,367	-		ECD_02659	0.48	-2.1
2,780,414	-		ECD_02659	0.53	-3.0
2,780,443	-		ECD_02659	0.56	-1.3
2,780,499	+		ECD_02659	0.62	-2.9
2,780,549	-		ECD_02659	0.67	+1.7
2,780,609	-		ECD_02659	0.74	+2.1
2,780,609	-		ECD_02659	0.74	-2.2
2,780,621	-		ECD_02659	0.75	-0.3
2,780,855	-				-0.7
2,780,855	-				-0.1
2,780,868	-				+0.2
2,780,904	-				-0.6
2,780,950	+				-1.3
2,780,960	+				-1.3
2,780,960	+				+1.7
2,780,960	+				-1.2
2,780,960	+				-2.1
2,780,960	+				-2.0
2,780,960	+				-2.8
2,780,961	-				-0.6
2,780,964	+				+0.2
2,780,964	+				-1.1
2,780,964	+				-1.0
2,780,964	+				-0.4
2,780,964	+				-0.5
2,780,964	+				-0.5
2,780,964	+				-1.8
2,780,964	+				-1.2
2,780,964	+				+1.1
2,780,964	+				-0.5
2,780,964	+				-3.2
2,780,964	+				-0.2
2,780,964	+				-1.4
2,780,965	-				-3.0
2,780,966	+				-2.7
2,780,966	+				-1.6
2,781,035	+				+2.1
2,781,035	+				-1.8
2,781,091	+				-0.2
2,781,091	+				+2.3
2,781,091	+				-2.3
2,781,100	+				-1.5
2,781,119	+				+1.2
2,781,119	+				-0.9
2,781,119	+				+1.4
2,781,119	+				+1.6
2,781,125	+				-1.6
2,781,125	+				-1.9
2,781,125	+				+0.7
2,781,125	+				+2.2
2,781,125	+				-1.7
2,781,125	+				-1.6
2,781,125	+				-1.7
2,781,125	+				+1.8
2,781,140	+				+2.3
2,781,147	+				-0.2
2,781,147	+				-1.6
2,781,147	+				-1.6
2,781,152	+				-1.2
2,781,152	+				-1.6
2,781,152	+				-1.1
2,781,152	+				-0.9
2,781,152	+				-1.6
2,781,152	+				+1.8
2,781,152	+				-0.9
2,781,152	+				-0.9
2,781,152	+				-0.7
2,781,162	+				-1.4
2,781,162	+				-2.0
2,781,162	+				-2.7
2,781,162	+				-2.7
2,781,199	+				-0.5
2,781,199	+				-0.0
2,781,199	+				-1.3
2,781,199	+				-2.5
2,781,269	+		ECD_02660	0.31	-0.1
2,781,269	+		ECD_02660	0.31	+2.2
2,781,271	+		ECD_02660	0.32	-0.1
2,781,271	+		ECD_02660	0.32	-0.2
2,781,271	+		ECD_02660	0.32	-0.4
2,781,271	+		ECD_02660	0.32	-0.4
2,781,271	+		ECD_02660	0.32	+1.7
2,781,282	-		ECD_02660	0.37	-0.3
2,781,326	+		ECD_02660	0.56	+2.7
2,781,326	+		ECD_02660	0.56	-1.0
2,781,326	+		ECD_02660	0.56	-0.6
2,781,326	+		ECD_02660	0.56	-0.3
2,781,326	+		ECD_02660	0.56	+0.1
2,781,327	-		ECD_02660	0.57	-1.4
2,781,327	-		ECD_02660	0.57	-0.1
2,781,327	-		ECD_02660	0.57	-0.9
2,781,327	-		ECD_02660	0.57	+2.7
2,781,327	-		ECD_02660	0.57	-1.1
2,781,327	-		ECD_02660	0.57	-0.8
2,781,352	+		ECD_02660	0.68	+0.5
2,781,352	+		ECD_02660	0.68	-0.6
2,781,352	+		ECD_02660	0.68	-0.8
2,781,353	-		ECD_02660	0.68	-0.1
2,781,353	-		ECD_02660	0.68	+0.7
2,781,353	-		ECD_02660	0.68	+2.2
2,781,392	+		ECD_02660	0.85	-0.6
2,781,393	-		ECD_02660	0.86	-0.8
2,781,405	-				+0.1
2,781,438	-				-0.3
2,781,460	-				-0.8
2,781,462	+				-1.6
2,781,462	+				-0.4
2,781,469	+				-0.8
2,781,483	+				-0.9
2,781,505	+				-0.8
2,781,505	+				-0.4
2,781,506	-				-0.2
2,781,506	-				-0.1
2,781,510	+				+3.0
2,781,510	+				-1.0
2,781,511	-				-0.9
2,781,511	-				-0.4
2,781,567	+				+0.6
2,781,567	+				+2.8
2,781,567	+				+3.2
2,781,568	-				+0.2
2,781,568	-				-2.3
2,781,613	+				+0.5
2,781,664	-				-2.1
2,781,664	-				-1.7
2,781,680	+				-1.6
2,781,681	-				-0.2
2,781,743	+		ECD_02661	0.10	-0.3
2,781,743	+		ECD_02661	0.10	-2.2
2,781,744	-		ECD_02661	0.11	-0.5
2,781,744	-		ECD_02661	0.11	-2.1
2,781,840	+		ECD_02661	0.18	-0.8
2,781,840	+		ECD_02661	0.18	-2.1
2,781,840	+		ECD_02661	0.18	+1.4
2,781,841	-		ECD_02661	0.19	-0.3
2,781,841	-		ECD_02661	0.19	-0.9