Strain Fitness in Escherichia coli BL21 around ECD_02651

Experiment: Ox4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02650 and ECD_02651 overlap by 50 nucleotidesECD_02651 and ECD_02652 are separated by 3 nucleotides ECD_02650: ECD_02650 - D-ribose-binding periplasmic protein, at 2,769,884 to 2,770,957 _02650 ECD_02651: ECD_02651 - Ribose transport system permease protein rbsC, at 2,770,908 to 2,771,891 _02651 ECD_02652: ECD_02652 - hypothetical protein, at 2,771,895 to 2,773,394 _02652 Position (kb) 2770 2771 2772Strain fitness (log2 ratio) -3 -2 -1 0 1at 2770.088 kb on - strand, within ECD_02650at 2770.088 kb on - strand, within ECD_02650at 2770.088 kb on - strand, within ECD_02650at 2770.284 kb on - strand, within ECD_02650at 2770.376 kb on - strand, within ECD_02650at 2770.396 kb on + strand, within ECD_02650at 2770.660 kb on - strand, within ECD_02650at 2770.660 kb on - strand, within ECD_02650at 2770.761 kb on - strand, within ECD_02650at 2770.806 kb on - strand, within ECD_02650at 2770.812 kb on + strand, within ECD_02650at 2770.813 kb on - strand, within ECD_02650at 2770.816 kb on + strand, within ECD_02650at 2770.817 kb on - strand, within ECD_02650at 2770.905 kb on - strandat 2770.932 kb on - strandat 2771.136 kb on + strand, within ECD_02651at 2771.137 kb on - strand, within ECD_02651at 2771.197 kb on - strand, within ECD_02651at 2771.197 kb on - strand, within ECD_02651at 2771.278 kb on - strand, within ECD_02651at 2771.285 kb on - strand, within ECD_02651at 2771.320 kb on + strand, within ECD_02651at 2771.321 kb on - strand, within ECD_02651at 2771.321 kb on - strand, within ECD_02651at 2771.337 kb on + strand, within ECD_02651at 2771.426 kb on - strand, within ECD_02651at 2771.454 kb on - strand, within ECD_02651at 2771.460 kb on - strand, within ECD_02651at 2771.496 kb on - strand, within ECD_02651at 2771.496 kb on - strand, within ECD_02651at 2771.573 kb on + strand, within ECD_02651at 2771.577 kb on - strand, within ECD_02651at 2771.703 kb on - strand, within ECD_02651at 2772.569 kb on + strand, within ECD_02652at 2772.606 kb on + strand, within ECD_02652at 2772.715 kb on + strand, within ECD_02652at 2772.734 kb on - strand, within ECD_02652at 2772.734 kb on - strand, within ECD_02652at 2772.772 kb on - strand, within ECD_02652at 2772.803 kb on - strand, within ECD_02652at 2772.884 kb on + strand, within ECD_02652

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Per-strain Table

Position Strand Gene LocusTag Fraction Ox4
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2,770,088 - ECD_02650 0.19 -0.2
2,770,088 - ECD_02650 0.19 +0.4
2,770,088 - ECD_02650 0.19 -0.9
2,770,284 - ECD_02650 0.37 +0.4
2,770,376 - ECD_02650 0.46 +0.8
2,770,396 + ECD_02650 0.48 -0.4
2,770,660 - ECD_02650 0.72 -1.4
2,770,660 - ECD_02650 0.72 -0.6
2,770,761 - ECD_02650 0.82 -0.1
2,770,806 - ECD_02650 0.86 -1.1
2,770,812 + ECD_02650 0.86 -0.7
2,770,813 - ECD_02650 0.86 -0.6
2,770,816 + ECD_02650 0.87 -0.4
2,770,817 - ECD_02650 0.87 -1.6
2,770,905 - -1.2
2,770,932 - +0.4
2,771,136 + ECD_02651 0.23 +0.2
2,771,137 - ECD_02651 0.23 -0.5
2,771,197 - ECD_02651 0.29 -1.1
2,771,197 - ECD_02651 0.29 -0.6
2,771,278 - ECD_02651 0.38 +0.2
2,771,285 - ECD_02651 0.38 -3.4
2,771,320 + ECD_02651 0.42 -0.2
2,771,321 - ECD_02651 0.42 -0.6
2,771,321 - ECD_02651 0.42 -1.4
2,771,337 + ECD_02651 0.44 -0.8
2,771,426 - ECD_02651 0.53 -0.7
2,771,454 - ECD_02651 0.55 -0.5
2,771,460 - ECD_02651 0.56 -0.7
2,771,496 - ECD_02651 0.60 -0.8
2,771,496 - ECD_02651 0.60 -1.4
2,771,573 + ECD_02651 0.68 -1.3
2,771,577 - ECD_02651 0.68 +0.1
2,771,703 - ECD_02651 0.81 -1.4
2,772,569 + ECD_02652 0.45 -0.5
2,772,606 + ECD_02652 0.47 -0.8
2,772,715 + ECD_02652 0.55 -1.4
2,772,734 - ECD_02652 0.56 -1.4
2,772,734 - ECD_02652 0.56 -1.1
2,772,772 - ECD_02652 0.58 +0.2
2,772,803 - ECD_02652 0.61 -0.5
2,772,884 + ECD_02652 0.66 -0.3

Or see this region's nucleotide sequence