Strain Fitness in Escherichia coli BL21 around ECD_02281

Experiment: Ox4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02280 and ECD_02281 are separated by 55 nucleotidesECD_02281 and ECD_02282 are separated by 73 nucleotides ECD_02280: ECD_02280 - hybrid sensory histidine kinase in two-component regulatory system with EvgA, at 2,362,262 to 2,365,855 _02280 ECD_02281: ECD_02281 - acetyl-CoA:oxalate CoA-transferase, at 2,365,911 to 2,367,056 _02281 ECD_02282: ECD_02282 - putative transporter, at 2,367,130 to 2,368,074 _02282 Position (kb) 2365 2366 2367 2368Strain fitness (log2 ratio) -2 -1 0 1at 2365.269 kb on - strand, within ECD_02280at 2365.470 kb on + strand, within ECD_02280at 2365.470 kb on + strand, within ECD_02280at 2365.912 kb on + strandat 2366.095 kb on - strand, within ECD_02281at 2366.353 kb on + strand, within ECD_02281at 2366.401 kb on + strand, within ECD_02281at 2366.552 kb on + strand, within ECD_02281at 2366.630 kb on - strand, within ECD_02281at 2366.684 kb on - strand, within ECD_02281at 2366.745 kb on - strand, within ECD_02281at 2366.858 kb on + strand, within ECD_02281at 2366.890 kb on + strand, within ECD_02281at 2367.047 kb on + strandat 2367.152 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ox4
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2,365,269 - ECD_02280 0.84 +0.9
2,365,470 + ECD_02280 0.89 +0.2
2,365,470 + ECD_02280 0.89 +0.8
2,365,912 + +0.9
2,366,095 - ECD_02281 0.16 -0.3
2,366,353 + ECD_02281 0.39 -0.5
2,366,401 + ECD_02281 0.43 -1.0
2,366,552 + ECD_02281 0.56 +0.2
2,366,630 - ECD_02281 0.63 +0.1
2,366,684 - ECD_02281 0.67 -0.2
2,366,745 - ECD_02281 0.73 +0.2
2,366,858 + ECD_02281 0.83 -0.1
2,366,890 + ECD_02281 0.85 -2.0
2,367,047 + +0.2
2,367,152 + +0.6

Or see this region's nucleotide sequence