Strain Fitness in Escherichia coli BL21 around ECD_01631

Experiment: Ox4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01630 and ECD_01631 are separated by 112 nucleotidesECD_01631 and ECD_01632 are separated by 290 nucleotides ECD_01630: ECD_01630 - LysR family putative transcriptional regulator, at 1,684,135 to 1,685,067 _01630 ECD_01631: ECD_01631 - putative arabinose efflux transporter, at 1,685,180 to 1,686,391 _01631 ECD_01632: ECD_01632 - cyclopropane fatty acyl phospholipid synthase, SAM-dependent, at 1,686,682 to 1,687,830 _01632 Position (kb) 1685 1686 1687Strain fitness (log2 ratio) -1 0 1 2at 1684.504 kb on - strand, within ECD_01630at 1684.504 kb on - strand, within ECD_01630at 1684.750 kb on - strand, within ECD_01630at 1685.177 kb on + strandat 1685.177 kb on + strandat 1685.177 kb on + strandat 1685.177 kb on + strandat 1685.177 kb on + strandat 1685.252 kb on + strandat 1685.904 kb on + strand, within ECD_01631at 1685.909 kb on + strand, within ECD_01631at 1686.119 kb on + strand, within ECD_01631at 1686.492 kb on + strandat 1686.587 kb on + strandat 1686.865 kb on + strand, within ECD_01632at 1687.231 kb on + strand, within ECD_01632at 1687.231 kb on + strand, within ECD_01632at 1687.231 kb on + strand, within ECD_01632

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Per-strain Table

Position Strand Gene LocusTag Fraction Ox4
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1,684,504 - ECD_01630 0.40 +0.6
1,684,504 - ECD_01630 0.40 -0.2
1,684,750 - ECD_01630 0.66 +0.4
1,685,177 + +1.0
1,685,177 + +2.4
1,685,177 + +0.9
1,685,177 + +1.9
1,685,177 + +1.7
1,685,252 + +1.8
1,685,904 + ECD_01631 0.60 -0.2
1,685,909 + ECD_01631 0.60 +0.9
1,686,119 + ECD_01631 0.77 +2.2
1,686,492 + -0.5
1,686,587 + +0.2
1,686,865 + ECD_01632 0.16 +0.4
1,687,231 + ECD_01632 0.48 +0.3
1,687,231 + ECD_01632 0.48 -0.3
1,687,231 + ECD_01632 0.48 -0.0

Or see this region's nucleotide sequence