Strain Fitness in Escherichia coli BL21 around ECD_00956

Experiment: Ox4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00955 and ECD_00956 overlap by 4 nucleotidesECD_00956 and ECD_00957 are separated by 255 nucleotidesECD_00957 and ECD_00958 are separated by 69 nucleotides ECD_00955: ECD_00955 - paraquat-inducible, SoxRS-regulated MCE domain protein, at 1,018,348 to 1,019,988 _00955 ECD_00956: ECD_00956 - DUF330 family putative lipoprotein, at 1,019,985 to 1,020,548 _00956 ECD_00957: ECD_00957 - ribosome modulation factor, at 1,020,804 to 1,020,971 _00957 ECD_00958: ECD_00958 - beta-hydroxydecanoyl thioester dehydrase, at 1,021,041 to 1,021,559 _00958 Position (kb) 1019 1020 1021Strain fitness (log2 ratio) -1 0 1 2at 1019.840 kb on - strandat 1020.174 kb on + strand, within ECD_00956at 1020.195 kb on + strand, within ECD_00956at 1020.734 kb on + strandat 1020.752 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Ox4
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1,019,840 - +0.8
1,020,174 + ECD_00956 0.34 +2.5
1,020,195 + ECD_00956 0.37 +0.9
1,020,734 + -0.0
1,020,752 + +0.8

Or see this region's nucleotide sequence