Experiment: Ox4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00749 and ECD_00750 are separated by 2 nucleotides ECD_00750 and ECD_00751 overlap by 8 nucleotides ECD_00751 and ECD_00752 are separated by 1 nucleotides ECD_00752 and ECD_00753 are separated by 135 nucleotides
ECD_00749: ECD_00749 - inactive molybdopterin adenylyltransferase, at 802,048 to 802,560
_00749
ECD_00750: ECD_00750 - molybdopterin biosynthesis, protein C, at 802,563 to 803,048
_00750
ECD_00751: ECD_00751 - molybdopterin synthase, small subunit, at 803,041 to 803,286
_00751
ECD_00752: ECD_00752 - molybdopterin synthase, large subunit, at 803,288 to 803,740
_00752
ECD_00753: ECD_00753 - putative acetate transporter; BAX Inhibitor-1 family inner membrane protein, at 803,876 to 804,580
_00753
Position (kb) 803
804 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 802.216 kb on - strand, within ECD_00749 at 802.257 kb on - strand, within ECD_00749 at 802.480 kb on - strand, within ECD_00749 at 802.558 kb on + strand at 802.562 kb on + strand at 802.562 kb on + strand at 802.694 kb on + strand, within ECD_00750 at 802.694 kb on + strand, within ECD_00750 at 802.723 kb on + strand, within ECD_00750 at 802.857 kb on - strand, within ECD_00750 at 802.867 kb on + strand, within ECD_00750 at 802.941 kb on + strand, within ECD_00750 at 802.942 kb on - strand, within ECD_00750 at 803.284 kb on + strand at 803.627 kb on - strand, within ECD_00752 at 803.636 kb on + strand, within ECD_00752 at 803.636 kb on + strand, within ECD_00752 at 803.794 kb on - strand at 803.794 kb on - strand at 803.856 kb on + strand at 803.856 kb on + strand at 803.856 kb on + strand at 803.857 kb on - strand at 803.859 kb on - strand at 803.933 kb on + strand at 803.935 kb on + strand at 803.997 kb on - strand, within ECD_00753 at 804.075 kb on + strand, within ECD_00753 at 804.127 kb on - strand, within ECD_00753 at 804.183 kb on + strand, within ECD_00753 at 804.195 kb on - strand, within ECD_00753 at 804.209 kb on - strand, within ECD_00753 at 804.285 kb on + strand, within ECD_00753
Per-strain Table
Position Strand Gene LocusTag Fraction Ox4 remove 802,216 - ECD_00749 0.33 -0.2 802,257 - ECD_00749 0.41 -0.9 802,480 - ECD_00749 0.84 +0.4 802,558 + -0.1 802,562 + +0.9 802,562 + -0.1 802,694 + ECD_00750 0.27 +1.0 802,694 + ECD_00750 0.27 -0.9 802,723 + ECD_00750 0.33 +1.7 802,857 - ECD_00750 0.60 +1.4 802,867 + ECD_00750 0.63 -0.5 802,941 + ECD_00750 0.78 +1.0 802,942 - ECD_00750 0.78 +0.6 803,284 + -0.8 803,627 - ECD_00752 0.75 -1.6 803,636 + ECD_00752 0.77 +0.1 803,636 + ECD_00752 0.77 -0.6 803,794 - -0.9 803,794 - -2.1 803,856 + -0.4 803,856 + -0.8 803,856 + +1.0 803,857 - -0.1 803,859 - +0.6 803,933 + +1.0 803,935 + +0.9 803,997 - ECD_00753 0.17 +0.3 804,075 + ECD_00753 0.28 -1.4 804,127 - ECD_00753 0.36 -3.0 804,183 + ECD_00753 0.44 -0.3 804,195 - ECD_00753 0.45 -0.8 804,209 - ECD_00753 0.47 -1.5 804,285 + ECD_00753 0.58 -0.5
Or see this region's nucleotide sequence