Experiment: Ox4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00614 and ECD_00615 are separated by 307 nucleotides
ECD_00614: ECD_00614 - uncharacterized protein, at 637,074 to 637,781
_00614
ECD_00615: ECD_00615 - J domain-containing HscC co-chaperone; Hsc56, at 638,089 to 639,228
_00615
Position (kb) 637
638 Strain fitness (log2 ratio) -2
-1
0
1
2 at 636.160 kb on + strand at 636.160 kb on + strand at 636.162 kb on + strand at 636.162 kb on + strand at 636.163 kb on - strand at 636.163 kb on - strand at 636.166 kb on + strand at 636.166 kb on + strand at 636.166 kb on + strand at 636.167 kb on - strand at 636.167 kb on - strand at 636.167 kb on - strand at 636.183 kb on + strand at 636.225 kb on + strand at 636.226 kb on - strand at 636.226 kb on - strand at 636.238 kb on + strand at 636.241 kb on - strand at 636.241 kb on - strand at 636.271 kb on - strand at 636.271 kb on - strand at 636.410 kb on - strand at 636.457 kb on - strand at 636.543 kb on + strand at 636.562 kb on + strand at 636.674 kb on - strand at 636.674 kb on - strand at 636.760 kb on - strand at 637.345 kb on + strand, within ECD_00614 at 637.466 kb on + strand, within ECD_00614 at 637.533 kb on + strand, within ECD_00614 at 637.538 kb on + strand, within ECD_00614 at 637.704 kb on + strand, within ECD_00614 at 637.714 kb on + strand at 637.912 kb on + strand at 637.994 kb on + strand at 638.075 kb on + strand at 638.108 kb on + strand at 638.135 kb on + strand at 638.136 kb on - strand at 638.371 kb on + strand, within ECD_00615 at 638.453 kb on - strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.625 kb on + strand, within ECD_00615 at 638.637 kb on + strand, within ECD_00615 at 638.688 kb on - strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.746 kb on + strand, within ECD_00615 at 638.754 kb on + strand, within ECD_00615
Per-strain Table
Position Strand Gene LocusTag Fraction Ox4 remove 636,160 + -1.7 636,160 + +0.5 636,162 + +0.2 636,162 + +0.3 636,163 - -0.2 636,163 - -2.5 636,166 + -0.1 636,166 + +0.4 636,166 + -0.3 636,167 - +0.3 636,167 - -0.3 636,167 - +0.8 636,183 + +2.7 636,225 + +0.0 636,226 - +0.1 636,226 - +1.0 636,238 + +0.1 636,241 - +1.0 636,241 - +0.6 636,271 - -0.6 636,271 - +0.0 636,410 - -0.4 636,457 - +1.1 636,543 + +1.0 636,562 + -0.7 636,674 - -0.4 636,674 - -0.7 636,760 - +0.2 637,345 + ECD_00614 0.38 -0.5 637,466 + ECD_00614 0.55 -0.9 637,533 + ECD_00614 0.65 -1.9 637,538 + ECD_00614 0.66 -0.1 637,704 + ECD_00614 0.89 -1.3 637,714 + -0.6 637,912 + +0.5 637,994 + +0.4 638,075 + -0.7 638,108 + +0.7 638,135 + +0.0 638,136 - +0.7 638,371 + ECD_00615 0.25 +1.3 638,453 - ECD_00615 0.32 +2.4 638,542 + ECD_00615 0.40 +0.5 638,542 + ECD_00615 0.40 +0.5 638,542 + ECD_00615 0.40 -0.9 638,625 + ECD_00615 0.47 -0.1 638,637 + ECD_00615 0.48 +0.7 638,688 - ECD_00615 0.53 +0.5 638,720 + ECD_00615 0.55 -0.4 638,720 + ECD_00615 0.55 -0.5 638,720 + ECD_00615 0.55 -0.7 638,746 + ECD_00615 0.58 -1.0 638,754 + ECD_00615 0.58 -0.8
Or see this region's nucleotide sequence