Experiment: Bas32
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03350 and ECD_03351 are separated by 53 nucleotides ECD_03351 and ECD_03352 are separated by 12 nucleotides
ECD_03350: ECD_03350 - arsenical resistance operon transcriptional repressor; autorepressor, at 3,510,914 to 3,511,267
_03350
ECD_03351: ECD_03351 - arsenite/antimonite transporter, at 3,511,321 to 3,512,610
_03351
ECD_03352: ECD_03352 - arsenate reductase, at 3,512,623 to 3,513,048
_03352
Position (kb)
3511
3512
3513 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3510.332 kb on - strand at 3510.332 kb on - strand at 3510.379 kb on + strand at 3510.384 kb on + strand at 3510.385 kb on - strand at 3510.395 kb on + strand at 3510.397 kb on + strand at 3510.398 kb on - strand at 3510.419 kb on + strand at 3510.432 kb on + strand at 3510.434 kb on - strand at 3510.437 kb on - strand at 3510.450 kb on + strand at 3510.451 kb on - strand at 3510.461 kb on + strand at 3510.462 kb on - strand at 3510.462 kb on - strand at 3510.554 kb on - strand at 3510.554 kb on - strand at 3510.554 kb on - strand at 3510.554 kb on - strand at 3510.578 kb on + strand at 3510.582 kb on + strand at 3510.582 kb on + strand at 3510.583 kb on - strand at 3510.598 kb on + strand at 3510.599 kb on - strand at 3510.600 kb on + strand at 3510.601 kb on - strand at 3510.602 kb on + strand at 3510.602 kb on + strand at 3510.671 kb on - strand at 3510.685 kb on + strand at 3510.685 kb on + strand at 3510.794 kb on - strand at 3510.815 kb on + strand at 3510.913 kb on + strand at 3510.913 kb on + strand at 3511.111 kb on + strand, within ECD_03350 at 3511.320 kb on + strand at 3511.366 kb on - strand at 3511.427 kb on + strand at 3511.428 kb on - strand at 3511.582 kb on - strand, within ECD_03351 at 3511.901 kb on + strand, within ECD_03351 at 3511.901 kb on + strand, within ECD_03351 at 3511.901 kb on + strand, within ECD_03351 at 3511.901 kb on + strand, within ECD_03351 at 3511.901 kb on + strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.902 kb on - strand, within ECD_03351 at 3511.936 kb on + strand, within ECD_03351 at 3511.986 kb on + strand, within ECD_03351 at 3511.986 kb on + strand, within ECD_03351 at 3511.986 kb on + strand, within ECD_03351 at 3511.987 kb on - strand, within ECD_03351 at 3511.987 kb on - strand, within ECD_03351 at 3511.987 kb on - strand, within ECD_03351 at 3512.096 kb on + strand, within ECD_03351 at 3512.096 kb on + strand, within ECD_03351 at 3512.096 kb on + strand, within ECD_03351 at 3512.097 kb on - strand, within ECD_03351 at 3512.130 kb on + strand, within ECD_03351 at 3512.137 kb on - strand, within ECD_03351 at 3512.188 kb on + strand, within ECD_03351 at 3512.188 kb on + strand, within ECD_03351 at 3512.188 kb on + strand, within ECD_03351 at 3512.188 kb on + strand, within ECD_03351 at 3512.189 kb on - strand, within ECD_03351 at 3512.189 kb on - strand, within ECD_03351 at 3512.189 kb on - strand, within ECD_03351 at 3512.201 kb on - strand, within ECD_03351 at 3512.230 kb on + strand, within ECD_03351 at 3512.319 kb on + strand, within ECD_03351 at 3512.319 kb on + strand, within ECD_03351 at 3512.319 kb on + strand, within ECD_03351 at 3512.319 kb on + strand, within ECD_03351 at 3512.320 kb on - strand, within ECD_03351 at 3512.320 kb on - strand, within ECD_03351 at 3512.320 kb on - strand, within ECD_03351 at 3512.322 kb on + strand, within ECD_03351 at 3512.331 kb on + strand, within ECD_03351 at 3512.332 kb on - strand, within ECD_03351 at 3512.407 kb on + strand, within ECD_03351 at 3512.408 kb on - strand, within ECD_03351 at 3512.472 kb on - strand, within ECD_03351 at 3512.502 kb on + strand at 3512.508 kb on + strand at 3512.524 kb on + strand at 3512.524 kb on + strand at 3512.525 kb on - strand at 3512.525 kb on - strand at 3512.541 kb on + strand at 3512.608 kb on + strand at 3512.608 kb on + strand at 3512.616 kb on + strand at 3512.616 kb on + strand at 3512.617 kb on - strand at 3512.617 kb on - strand at 3512.622 kb on + strand at 3512.623 kb on - strand at 3512.634 kb on + strand at 3512.635 kb on - strand at 3512.641 kb on + strand at 3512.641 kb on + strand at 3512.641 kb on + strand at 3512.641 kb on + strand at 3512.641 kb on + strand at 3512.641 kb on + strand at 3512.642 kb on - strand at 3512.642 kb on - strand at 3512.642 kb on - strand at 3512.671 kb on - strand, within ECD_03352 at 3512.674 kb on - strand, within ECD_03352 at 3512.803 kb on - strand, within ECD_03352 at 3512.818 kb on + strand, within ECD_03352 at 3512.819 kb on - strand, within ECD_03352 at 3513.156 kb on + strand at 3513.156 kb on + strand at 3513.159 kb on + strand at 3513.159 kb on + strand at 3513.210 kb on + strand at 3513.211 kb on - strand at 3513.259 kb on + strand at 3513.298 kb on - strand at 3513.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas32 remove 3,510,332 - -1.1 3,510,332 - +0.2 3,510,379 + +1.0 3,510,384 + -0.3 3,510,385 - -0.6 3,510,395 + -0.7 3,510,397 + +0.3 3,510,398 - -0.3 3,510,419 + -0.9 3,510,432 + +0.3 3,510,434 - -0.0 3,510,437 - +0.1 3,510,450 + -0.5 3,510,451 - +0.3 3,510,461 + +0.0 3,510,462 - +0.1 3,510,462 - -0.2 3,510,554 - +1.3 3,510,554 - -0.1 3,510,554 - -1.3 3,510,554 - -0.5 3,510,578 + +0.6 3,510,582 + +0.2 3,510,582 + -0.3 3,510,583 - +0.4 3,510,598 + +0.0 3,510,599 - -0.1 3,510,600 + -0.6 3,510,601 - -0.4 3,510,602 + -0.0 3,510,602 + +0.8 3,510,671 - -0.7 3,510,685 + -0.5 3,510,685 + +0.0 3,510,794 - -0.1 3,510,815 + +0.9 3,510,913 + -0.7 3,510,913 + +0.1 3,511,111 + ECD_03350 0.56 +0.8 3,511,320 + +1.1 3,511,366 - -0.1 3,511,427 + +0.1 3,511,428 - +1.3 3,511,582 - ECD_03351 0.20 -0.0 3,511,901 + ECD_03351 0.45 +0.2 3,511,901 + ECD_03351 0.45 -0.4 3,511,901 + ECD_03351 0.45 +0.1 3,511,901 + ECD_03351 0.45 +1.3 3,511,901 + ECD_03351 0.45 +0.4 3,511,902 - ECD_03351 0.45 -0.3 3,511,902 - ECD_03351 0.45 +0.1 3,511,902 - ECD_03351 0.45 +1.1 3,511,902 - ECD_03351 0.45 -0.0 3,511,902 - ECD_03351 0.45 -0.7 3,511,902 - ECD_03351 0.45 -0.1 3,511,902 - ECD_03351 0.45 +0.0 3,511,902 - ECD_03351 0.45 +0.9 3,511,936 + ECD_03351 0.48 +2.6 3,511,986 + ECD_03351 0.52 +0.3 3,511,986 + ECD_03351 0.52 -1.2 3,511,986 + ECD_03351 0.52 -0.0 3,511,987 - ECD_03351 0.52 +0.3 3,511,987 - ECD_03351 0.52 +1.0 3,511,987 - ECD_03351 0.52 +1.7 3,512,096 + ECD_03351 0.60 +0.7 3,512,096 + ECD_03351 0.60 +0.5 3,512,096 + ECD_03351 0.60 -0.5 3,512,097 - ECD_03351 0.60 -0.4 3,512,130 + ECD_03351 0.63 +1.6 3,512,137 - ECD_03351 0.63 +1.1 3,512,188 + ECD_03351 0.67 +0.1 3,512,188 + ECD_03351 0.67 +0.0 3,512,188 + ECD_03351 0.67 -0.7 3,512,188 + ECD_03351 0.67 +0.7 3,512,189 - ECD_03351 0.67 +0.3 3,512,189 - ECD_03351 0.67 -0.1 3,512,189 - ECD_03351 0.67 +1.5 3,512,201 - ECD_03351 0.68 +1.0 3,512,230 + ECD_03351 0.70 -0.6 3,512,319 + ECD_03351 0.77 -0.5 3,512,319 + ECD_03351 0.77 -0.9 3,512,319 + ECD_03351 0.77 +0.9 3,512,319 + ECD_03351 0.77 -0.4 3,512,320 - ECD_03351 0.77 -0.0 3,512,320 - ECD_03351 0.77 +0.5 3,512,320 - ECD_03351 0.77 -0.8 3,512,322 + ECD_03351 0.78 +0.2 3,512,331 + ECD_03351 0.78 -0.3 3,512,332 - ECD_03351 0.78 -0.7 3,512,407 + ECD_03351 0.84 -0.7 3,512,408 - ECD_03351 0.84 -0.4 3,512,472 - ECD_03351 0.89 +0.4 3,512,502 + -1.1 3,512,508 + -0.7 3,512,524 + -0.3 3,512,524 + -0.0 3,512,525 - +0.3 3,512,525 - -1.8 3,512,541 + +0.6 3,512,608 + -0.1 3,512,608 + +0.5 3,512,616 + +1.0 3,512,616 + +0.6 3,512,617 - +0.5 3,512,617 - -1.2 3,512,622 + +0.6 3,512,623 - -1.8 3,512,634 + +0.2 3,512,635 - -0.6 3,512,641 + +0.2 3,512,641 + +0.1 3,512,641 + +0.9 3,512,641 + +0.7 3,512,641 + +0.9 3,512,641 + +0.0 3,512,642 - -0.2 3,512,642 - -0.1 3,512,642 - -0.7 3,512,671 - ECD_03352 0.11 -0.6 3,512,674 - ECD_03352 0.12 +1.0 3,512,803 - ECD_03352 0.42 -0.7 3,512,818 + ECD_03352 0.46 -0.1 3,512,819 - ECD_03352 0.46 +0.3 3,513,156 + +0.9 3,513,156 + -0.2 3,513,159 + -0.5 3,513,159 + +0.3 3,513,210 + -0.5 3,513,211 - -0.1 3,513,259 + -0.1 3,513,298 - +0.6 3,513,298 - -0.1
Or see this region's nucleotide sequence