Experiment: Bas26
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02758 and ECD_02759 are separated by 284 nucleotides ECD_02759 and ECD_02760 overlap by 4 nucleotides ECD_02760 and ECD_02761 are separated by 21 nucleotides
ECD_02758: ECD_02758 - D-erythrose 4-phosphate dehydrogenase, at 2,903,530 to 2,904,549
_02758
ECD_02759: ECD_02759 - putative PanK family P-loop kinase, at 2,904,834 to 2,905,547
_02759
ECD_02760: ECD_02760 - MtlR family putative transcriptional repressor, at 2,905,544 to 2,906,053
_02760
ECD_02761: ECD_02761 - fructose 1,6 bisphosphatase isozyme, at 2,906,075 to 2,907,040
_02761
Position (kb)
2904
2905
2906 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2903.910 kb on + strand, within ECD_02758 at 2903.911 kb on - strand, within ECD_02758 at 2903.969 kb on + strand, within ECD_02758 at 2903.970 kb on - strand, within ECD_02758 at 2903.979 kb on + strand, within ECD_02758 at 2904.034 kb on - strand, within ECD_02758 at 2904.050 kb on - strand, within ECD_02758 at 2904.070 kb on + strand, within ECD_02758 at 2904.213 kb on + strand, within ECD_02758 at 2904.214 kb on - strand, within ECD_02758 at 2904.242 kb on + strand, within ECD_02758 at 2904.242 kb on + strand, within ECD_02758 at 2904.243 kb on - strand, within ECD_02758 at 2904.243 kb on - strand, within ECD_02758 at 2904.244 kb on + strand, within ECD_02758 at 2904.244 kb on + strand, within ECD_02758 at 2904.244 kb on + strand, within ECD_02758 at 2904.245 kb on - strand, within ECD_02758 at 2904.245 kb on - strand, within ECD_02758 at 2904.245 kb on - strand, within ECD_02758 at 2904.245 kb on - strand, within ECD_02758 at 2904.265 kb on + strand, within ECD_02758 at 2904.266 kb on - strand, within ECD_02758 at 2904.266 kb on - strand, within ECD_02758 at 2904.266 kb on - strand, within ECD_02758 at 2904.266 kb on - strand, within ECD_02758 at 2904.266 kb on - strand, within ECD_02758 at 2904.320 kb on - strand, within ECD_02758 at 2904.367 kb on + strand, within ECD_02758 at 2904.368 kb on - strand, within ECD_02758 at 2904.368 kb on - strand, within ECD_02758 at 2904.401 kb on + strand, within ECD_02758 at 2904.402 kb on - strand, within ECD_02758 at 2904.402 kb on - strand, within ECD_02758 at 2904.402 kb on - strand, within ECD_02758 at 2904.402 kb on - strand, within ECD_02758 at 2904.460 kb on - strand at 2904.460 kb on - strand at 2904.485 kb on + strand at 2904.485 kb on + strand at 2904.485 kb on + strand at 2904.486 kb on - strand at 2904.504 kb on + strand at 2904.530 kb on - strand at 2904.541 kb on + strand at 2904.549 kb on + strand at 2904.549 kb on + strand at 2904.549 kb on + strand at 2904.549 kb on + strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.550 kb on - strand at 2904.595 kb on - strand at 2904.595 kb on - strand at 2904.623 kb on - strand at 2904.623 kb on - strand at 2904.623 kb on - strand at 2904.651 kb on - strand at 2904.688 kb on - strand at 2904.709 kb on - strand at 2904.742 kb on + strand at 2904.742 kb on + strand at 2904.743 kb on - strand at 2904.743 kb on - strand at 2904.743 kb on - strand at 2904.743 kb on - strand at 2904.805 kb on - strand at 2904.805 kb on - strand at 2904.805 kb on - strand at 2904.873 kb on + strand at 2904.874 kb on - strand at 2904.874 kb on - strand at 2904.874 kb on - strand at 2904.877 kb on - strand at 2904.941 kb on - strand, within ECD_02759 at 2905.083 kb on + strand, within ECD_02759 at 2905.166 kb on - strand, within ECD_02759 at 2905.178 kb on + strand, within ECD_02759 at 2905.178 kb on + strand, within ECD_02759 at 2905.178 kb on + strand, within ECD_02759 at 2905.178 kb on + strand, within ECD_02759 at 2905.179 kb on - strand, within ECD_02759 at 2905.179 kb on - strand, within ECD_02759 at 2905.179 kb on - strand, within ECD_02759 at 2905.283 kb on + strand, within ECD_02759 at 2905.283 kb on + strand, within ECD_02759 at 2905.284 kb on - strand, within ECD_02759 at 2905.284 kb on - strand, within ECD_02759 at 2905.288 kb on + strand, within ECD_02759 at 2905.288 kb on + strand, within ECD_02759 at 2905.289 kb on - strand, within ECD_02759 at 2905.289 kb on - strand, within ECD_02759 at 2905.289 kb on - strand, within ECD_02759 at 2905.289 kb on - strand, within ECD_02759 at 2905.289 kb on - strand, within ECD_02759 at 2905.354 kb on + strand, within ECD_02759 at 2905.355 kb on - strand, within ECD_02759 at 2905.473 kb on - strand, within ECD_02759 at 2905.476 kb on + strand at 2905.502 kb on - strand at 2905.502 kb on - strand at 2905.502 kb on - strand at 2905.512 kb on + strand at 2905.553 kb on + strand at 2905.554 kb on - strand at 2905.554 kb on - strand at 2905.609 kb on + strand, within ECD_02760 at 2905.668 kb on + strand, within ECD_02760 at 2905.800 kb on + strand, within ECD_02760 at 2905.801 kb on - strand, within ECD_02760 at 2905.810 kb on + strand, within ECD_02760 at 2905.810 kb on + strand, within ECD_02760 at 2905.811 kb on - strand, within ECD_02760 at 2905.830 kb on + strand, within ECD_02760 at 2905.987 kb on + strand, within ECD_02760 at 2905.988 kb on - strand, within ECD_02760 at 2906.066 kb on - strand at 2906.090 kb on + strand at 2906.090 kb on + strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.091 kb on - strand at 2906.093 kb on + strand at 2906.093 kb on + strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.094 kb on - strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.095 kb on + strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.096 kb on - strand at 2906.098 kb on + strand at 2906.098 kb on + strand at 2906.099 kb on - strand at 2906.127 kb on - strand at 2906.127 kb on - strand at 2906.127 kb on - strand at 2906.127 kb on - strand at 2906.204 kb on - strand, within ECD_02761 at 2906.319 kb on + strand, within ECD_02761 at 2906.320 kb on - strand, within ECD_02761 at 2906.427 kb on + strand, within ECD_02761 at 2906.427 kb on + strand, within ECD_02761 at 2906.427 kb on + strand, within ECD_02761 at 2906.428 kb on - strand, within ECD_02761
Per-strain Table
Position Strand Gene LocusTag Fraction Bas26 remove 2,903,910 + ECD_02758 0.37 +0.6 2,903,911 - ECD_02758 0.37 -2.3 2,903,969 + ECD_02758 0.43 -0.9 2,903,970 - ECD_02758 0.43 -0.2 2,903,979 + ECD_02758 0.44 -0.0 2,904,034 - ECD_02758 0.49 +0.4 2,904,050 - ECD_02758 0.51 -0.7 2,904,070 + ECD_02758 0.53 -0.0 2,904,213 + ECD_02758 0.67 +0.8 2,904,214 - ECD_02758 0.67 -0.4 2,904,242 + ECD_02758 0.70 +1.0 2,904,242 + ECD_02758 0.70 -1.5 2,904,243 - ECD_02758 0.70 -1.0 2,904,243 - ECD_02758 0.70 -0.8 2,904,244 + ECD_02758 0.70 -0.7 2,904,244 + ECD_02758 0.70 +0.5 2,904,244 + ECD_02758 0.70 +0.6 2,904,245 - ECD_02758 0.70 +0.5 2,904,245 - ECD_02758 0.70 -0.7 2,904,245 - ECD_02758 0.70 +0.5 2,904,245 - ECD_02758 0.70 -0.8 2,904,265 + ECD_02758 0.72 -0.7 2,904,266 - ECD_02758 0.72 -0.0 2,904,266 - ECD_02758 0.72 +0.4 2,904,266 - ECD_02758 0.72 -0.9 2,904,266 - ECD_02758 0.72 +0.7 2,904,266 - ECD_02758 0.72 -0.1 2,904,320 - ECD_02758 0.77 -1.4 2,904,367 + ECD_02758 0.82 -0.2 2,904,368 - ECD_02758 0.82 -1.1 2,904,368 - ECD_02758 0.82 -0.0 2,904,401 + ECD_02758 0.85 -0.9 2,904,402 - ECD_02758 0.85 -2.1 2,904,402 - ECD_02758 0.85 -0.1 2,904,402 - ECD_02758 0.85 +0.1 2,904,402 - ECD_02758 0.85 +0.1 2,904,460 - +1.0 2,904,460 - +0.1 2,904,485 + -0.7 2,904,485 + -0.6 2,904,485 + +0.4 2,904,486 - -1.0 2,904,504 + +0.4 2,904,530 - -0.2 2,904,541 + +2.3 2,904,549 + +0.5 2,904,549 + +0.6 2,904,549 + -0.5 2,904,549 + -0.9 2,904,550 - +0.3 2,904,550 - -0.1 2,904,550 - -3.0 2,904,550 - -0.4 2,904,550 - +1.2 2,904,550 - +0.2 2,904,550 - -0.3 2,904,550 - -0.6 2,904,550 - +0.3 2,904,550 - -0.1 2,904,550 - +0.2 2,904,550 - -0.4 2,904,595 - +0.4 2,904,595 - -0.3 2,904,623 - -0.6 2,904,623 - +0.2 2,904,623 - +0.5 2,904,651 - +0.1 2,904,688 - +0.5 2,904,709 - +0.4 2,904,742 + -0.2 2,904,742 + +0.0 2,904,743 - -0.1 2,904,743 - -0.3 2,904,743 - +1.5 2,904,743 - +0.1 2,904,805 - -0.3 2,904,805 - +0.1 2,904,805 - +0.2 2,904,873 + +0.8 2,904,874 - +0.6 2,904,874 - -0.7 2,904,874 - +0.4 2,904,877 - -0.6 2,904,941 - ECD_02759 0.15 -0.3 2,905,083 + ECD_02759 0.35 +1.0 2,905,166 - ECD_02759 0.46 +0.3 2,905,178 + ECD_02759 0.48 +1.6 2,905,178 + ECD_02759 0.48 +0.7 2,905,178 + ECD_02759 0.48 -0.2 2,905,178 + ECD_02759 0.48 -1.5 2,905,179 - ECD_02759 0.48 +1.3 2,905,179 - ECD_02759 0.48 +1.1 2,905,179 - ECD_02759 0.48 +0.1 2,905,283 + ECD_02759 0.63 -0.0 2,905,283 + ECD_02759 0.63 -0.6 2,905,284 - ECD_02759 0.63 -0.1 2,905,284 - ECD_02759 0.63 +1.1 2,905,288 + ECD_02759 0.64 -1.3 2,905,288 + ECD_02759 0.64 -0.3 2,905,289 - ECD_02759 0.64 +0.2 2,905,289 - ECD_02759 0.64 -0.7 2,905,289 - ECD_02759 0.64 +1.0 2,905,289 - ECD_02759 0.64 +0.9 2,905,289 - ECD_02759 0.64 +0.8 2,905,354 + ECD_02759 0.73 +0.2 2,905,355 - ECD_02759 0.73 +0.6 2,905,473 - ECD_02759 0.89 -1.0 2,905,476 + +0.2 2,905,502 - -0.5 2,905,502 - +0.8 2,905,502 - +0.2 2,905,512 + +0.2 2,905,553 + +0.5 2,905,554 - +0.6 2,905,554 - -0.3 2,905,609 + ECD_02760 0.13 -1.1 2,905,668 + ECD_02760 0.24 -0.3 2,905,800 + ECD_02760 0.50 +0.1 2,905,801 - ECD_02760 0.50 +0.5 2,905,810 + ECD_02760 0.52 -0.2 2,905,810 + ECD_02760 0.52 -0.8 2,905,811 - ECD_02760 0.52 -0.3 2,905,830 + ECD_02760 0.56 -0.8 2,905,987 + ECD_02760 0.87 +0.5 2,905,988 - ECD_02760 0.87 +0.1 2,906,066 - +0.2 2,906,090 + +0.6 2,906,090 + -1.6 2,906,091 - +0.6 2,906,091 - -0.9 2,906,091 - -0.6 2,906,091 - +0.6 2,906,091 - +0.6 2,906,093 + -0.0 2,906,093 + +0.2 2,906,094 - +2.0 2,906,094 - -0.0 2,906,094 - -0.5 2,906,094 - +0.9 2,906,094 - -0.4 2,906,094 - +0.4 2,906,094 - +0.2 2,906,094 - -0.2 2,906,095 + -0.1 2,906,095 + +0.2 2,906,095 + -1.1 2,906,095 + -1.1 2,906,095 + +0.7 2,906,095 + -0.4 2,906,095 + -0.7 2,906,095 + -0.5 2,906,095 + -0.0 2,906,096 - +0.1 2,906,096 - -0.1 2,906,096 - +0.5 2,906,096 - +0.5 2,906,096 - -0.3 2,906,096 - +1.1 2,906,098 + +0.2 2,906,098 + -1.6 2,906,099 - -1.6 2,906,127 - +1.1 2,906,127 - +0.7 2,906,127 - -0.6 2,906,127 - +0.1 2,906,204 - ECD_02761 0.13 +0.8 2,906,319 + ECD_02761 0.25 -0.1 2,906,320 - ECD_02761 0.25 -0.2 2,906,427 + ECD_02761 0.36 +0.0 2,906,427 + ECD_02761 0.36 +1.3 2,906,427 + ECD_02761 0.36 -0.0 2,906,428 - ECD_02761 0.37 +0.1
Or see this region's nucleotide sequence