Strain Fitness in Escherichia coli BL21 around ECD_01484

Experiment: Bas26

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01483 and ECD_01484 are separated by 77 nucleotidesECD_01484 and ECD_01485 are separated by 149 nucleotides ECD_01483: ECD_01483 - putative DNA-binding transcriptional regulator, at 1,563,377 to 1,564,258 _01483 ECD_01484: ECD_01484 - uncharacterized protein, at 1,564,336 to 1,565,451 _01484 ECD_01485: ECD_01485 - arabinose efflux transporter, arabinose-inducible, at 1,565,601 to 1,566,791 _01485 Position (kb) 1564 1565 1566Strain fitness (log2 ratio) -1 0 1at 1563.645 kb on + strand, within ECD_01483at 1566.291 kb on + strand, within ECD_01485

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas26
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1,563,645 + ECD_01483 0.30 +0.0
1,566,291 + ECD_01485 0.58 -0.2

Or see this region's nucleotide sequence