Experiment: Bas24
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04266 and ECD_04267 are separated by 306 nucleotides ECD_04267 and ECD_04268 are separated by 210 nucleotides
ECD_04266: ECD_04266 - trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor, at 4,544,670 to 4,545,902
_04266
ECD_04267: ECD_04267 - energy-dependent translational throttle A, at 4,546,209 to 4,547,876
_04267
ECD_04268: ECD_04268 - lytic murein transglycosylase, soluble, at 4,548,087 to 4,550,024
_04268
Position (kb)
4546
4547
4548 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4545.225 kb on + strand, within ECD_04266 at 4545.225 kb on + strand, within ECD_04266 at 4545.225 kb on + strand, within ECD_04266 at 4545.225 kb on + strand, within ECD_04266 at 4545.226 kb on - strand, within ECD_04266 at 4545.226 kb on - strand, within ECD_04266 at 4545.227 kb on + strand, within ECD_04266 at 4545.228 kb on - strand, within ECD_04266 at 4545.228 kb on - strand, within ECD_04266 at 4545.273 kb on - strand, within ECD_04266 at 4545.330 kb on + strand, within ECD_04266 at 4545.330 kb on + strand, within ECD_04266 at 4545.330 kb on + strand, within ECD_04266 at 4545.331 kb on - strand, within ECD_04266 at 4545.332 kb on + strand, within ECD_04266 at 4545.332 kb on + strand, within ECD_04266 at 4545.333 kb on - strand, within ECD_04266 at 4545.333 kb on - strand, within ECD_04266 at 4545.333 kb on - strand, within ECD_04266 at 4545.361 kb on + strand, within ECD_04266 at 4545.361 kb on + strand, within ECD_04266 at 4545.429 kb on - strand, within ECD_04266 at 4545.468 kb on + strand, within ECD_04266 at 4545.633 kb on + strand, within ECD_04266 at 4545.840 kb on + strand at 4546.039 kb on + strand at 4546.039 kb on + strand at 4546.040 kb on - strand at 4546.050 kb on + strand at 4546.122 kb on + strand at 4546.123 kb on - strand at 4546.147 kb on - strand at 4546.210 kb on + strand at 4546.211 kb on - strand at 4546.279 kb on + strand at 4546.280 kb on - strand at 4546.302 kb on - strand at 4546.322 kb on + strand at 4546.359 kb on - strand at 4546.578 kb on - strand, within ECD_04267 at 4546.597 kb on + strand, within ECD_04267 at 4546.634 kb on + strand, within ECD_04267 at 4546.886 kb on + strand, within ECD_04267 at 4547.037 kb on - strand, within ECD_04267 at 4547.037 kb on - strand, within ECD_04267 at 4547.037 kb on - strand, within ECD_04267 at 4547.078 kb on + strand, within ECD_04267 at 4547.078 kb on + strand, within ECD_04267 at 4547.146 kb on + strand, within ECD_04267 at 4547.147 kb on - strand, within ECD_04267 at 4547.165 kb on + strand, within ECD_04267 at 4547.219 kb on - strand, within ECD_04267 at 4547.232 kb on - strand, within ECD_04267 at 4547.425 kb on - strand, within ECD_04267 at 4547.425 kb on - strand, within ECD_04267 at 4547.452 kb on - strand, within ECD_04267 at 4547.462 kb on + strand, within ECD_04267 at 4547.463 kb on - strand, within ECD_04267 at 4547.554 kb on + strand, within ECD_04267 at 4547.709 kb on - strand, within ECD_04267 at 4547.709 kb on - strand, within ECD_04267 at 4547.724 kb on - strand at 4547.739 kb on - strand at 4547.858 kb on + strand at 4547.858 kb on + strand at 4547.858 kb on + strand at 4547.859 kb on - strand at 4547.859 kb on - strand at 4547.931 kb on - strand at 4547.931 kb on - strand at 4547.976 kb on + strand at 4547.976 kb on + strand at 4547.977 kb on - strand at 4548.006 kb on + strand at 4548.029 kb on + strand at 4548.029 kb on + strand at 4548.029 kb on + strand at 4548.030 kb on - strand at 4548.030 kb on - strand at 4548.030 kb on - strand at 4548.036 kb on - strand at 4548.063 kb on + strand at 4548.063 kb on + strand at 4548.063 kb on + strand at 4548.063 kb on + strand at 4548.063 kb on + strand at 4548.064 kb on - strand at 4548.064 kb on - strand at 4548.067 kb on + strand at 4548.073 kb on + strand at 4548.345 kb on - strand, within ECD_04268 at 4548.345 kb on - strand, within ECD_04268 at 4548.443 kb on - strand, within ECD_04268 at 4548.486 kb on - strand, within ECD_04268 at 4548.486 kb on - strand, within ECD_04268 at 4548.489 kb on + strand, within ECD_04268 at 4548.489 kb on + strand, within ECD_04268 at 4548.489 kb on + strand, within ECD_04268 at 4548.489 kb on + strand, within ECD_04268 at 4548.489 kb on + strand, within ECD_04268 at 4548.489 kb on + strand, within ECD_04268 at 4548.489 kb on + strand, within ECD_04268 at 4548.490 kb on - strand, within ECD_04268 at 4548.490 kb on - strand, within ECD_04268 at 4548.490 kb on - strand, within ECD_04268 at 4548.492 kb on + strand, within ECD_04268 at 4548.592 kb on + strand, within ECD_04268 at 4548.592 kb on + strand, within ECD_04268 at 4548.592 kb on + strand, within ECD_04268 at 4548.593 kb on - strand, within ECD_04268 at 4548.596 kb on + strand, within ECD_04268 at 4548.636 kb on + strand, within ECD_04268 at 4548.641 kb on - strand, within ECD_04268 at 4548.685 kb on + strand, within ECD_04268 at 4548.761 kb on + strand, within ECD_04268
Per-strain Table
Position Strand Gene LocusTag Fraction Bas24 remove 4,545,225 + ECD_04266 0.45 -1.9 4,545,225 + ECD_04266 0.45 -0.4 4,545,225 + ECD_04266 0.45 +0.1 4,545,225 + ECD_04266 0.45 -1.5 4,545,226 - ECD_04266 0.45 -1.3 4,545,226 - ECD_04266 0.45 -0.9 4,545,227 + ECD_04266 0.45 -2.3 4,545,228 - ECD_04266 0.45 -1.8 4,545,228 - ECD_04266 0.45 -2.3 4,545,273 - ECD_04266 0.49 -0.3 4,545,330 + ECD_04266 0.54 -0.8 4,545,330 + ECD_04266 0.54 -0.6 4,545,330 + ECD_04266 0.54 -1.1 4,545,331 - ECD_04266 0.54 -1.7 4,545,332 + ECD_04266 0.54 +0.0 4,545,332 + ECD_04266 0.54 +0.4 4,545,333 - ECD_04266 0.54 -0.2 4,545,333 - ECD_04266 0.54 -1.1 4,545,333 - ECD_04266 0.54 +0.0 4,545,361 + ECD_04266 0.56 -1.4 4,545,361 + ECD_04266 0.56 -1.7 4,545,429 - ECD_04266 0.62 -1.3 4,545,468 + ECD_04266 0.65 -1.6 4,545,633 + ECD_04266 0.78 -0.6 4,545,840 + -1.5 4,546,039 + +0.5 4,546,039 + -0.0 4,546,040 - -0.9 4,546,050 + -0.4 4,546,122 + -0.1 4,546,123 - -1.1 4,546,147 - -0.2 4,546,210 + +1.3 4,546,211 - -0.4 4,546,279 + +0.1 4,546,280 - +0.3 4,546,302 - -1.6 4,546,322 + -0.1 4,546,359 - +0.0 4,546,578 - ECD_04267 0.22 -0.7 4,546,597 + ECD_04267 0.23 +0.3 4,546,634 + ECD_04267 0.25 +0.5 4,546,886 + ECD_04267 0.41 +1.0 4,547,037 - ECD_04267 0.50 +1.6 4,547,037 - ECD_04267 0.50 +0.3 4,547,037 - ECD_04267 0.50 +0.1 4,547,078 + ECD_04267 0.52 +0.7 4,547,078 + ECD_04267 0.52 +0.8 4,547,146 + ECD_04267 0.56 +0.1 4,547,147 - ECD_04267 0.56 +0.3 4,547,165 + ECD_04267 0.57 -0.6 4,547,219 - ECD_04267 0.61 +1.5 4,547,232 - ECD_04267 0.61 +0.0 4,547,425 - ECD_04267 0.73 +1.1 4,547,425 - ECD_04267 0.73 +0.9 4,547,452 - ECD_04267 0.75 -0.3 4,547,462 + ECD_04267 0.75 -0.3 4,547,463 - ECD_04267 0.75 -1.0 4,547,554 + ECD_04267 0.81 +0.1 4,547,709 - ECD_04267 0.90 +0.6 4,547,709 - ECD_04267 0.90 +1.2 4,547,724 - +0.5 4,547,739 - -0.1 4,547,858 + +0.5 4,547,858 + +0.2 4,547,858 + +0.4 4,547,859 - +0.2 4,547,859 - +0.4 4,547,931 - -1.2 4,547,931 - +0.6 4,547,976 + -0.1 4,547,976 + -0.5 4,547,977 - -0.6 4,548,006 + -0.1 4,548,029 + +0.3 4,548,029 + +0.9 4,548,029 + -1.3 4,548,030 - -1.1 4,548,030 - -0.1 4,548,030 - +0.4 4,548,036 - -0.5 4,548,063 + -0.4 4,548,063 + -0.7 4,548,063 + +0.5 4,548,063 + -0.5 4,548,063 + +0.6 4,548,064 - +0.2 4,548,064 - -1.3 4,548,067 + -0.2 4,548,073 + +0.1 4,548,345 - ECD_04268 0.13 +1.3 4,548,345 - ECD_04268 0.13 -1.1 4,548,443 - ECD_04268 0.18 +2.8 4,548,486 - ECD_04268 0.21 +0.5 4,548,486 - ECD_04268 0.21 +0.3 4,548,489 + ECD_04268 0.21 +0.6 4,548,489 + ECD_04268 0.21 +1.0 4,548,489 + ECD_04268 0.21 +0.6 4,548,489 + ECD_04268 0.21 -0.3 4,548,489 + ECD_04268 0.21 -1.1 4,548,489 + ECD_04268 0.21 +0.7 4,548,489 + ECD_04268 0.21 -3.3 4,548,490 - ECD_04268 0.21 -0.6 4,548,490 - ECD_04268 0.21 -1.7 4,548,490 - ECD_04268 0.21 +1.2 4,548,492 + ECD_04268 0.21 +0.2 4,548,592 + ECD_04268 0.26 +0.4 4,548,592 + ECD_04268 0.26 -0.4 4,548,592 + ECD_04268 0.26 +0.7 4,548,593 - ECD_04268 0.26 -1.2 4,548,596 + ECD_04268 0.26 -0.1 4,548,636 + ECD_04268 0.28 -0.4 4,548,641 - ECD_04268 0.29 +0.1 4,548,685 + ECD_04268 0.31 -1.0 4,548,761 + ECD_04268 0.35 -1.1
Or see this region's nucleotide sequence