Strain Fitness in Escherichia coli BL21 around ECD_04265

Experiment: Bas24

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04264 and ECD_04265 are separated by 48 nucleotidesECD_04265 and ECD_04266 are separated by 20 nucleotides ECD_04264: ECD_04264 - 3-phosphoserine phosphatase, at 4,542,250 to 4,543,218 _04264 ECD_04265: ECD_04265 - DNA repair protein, at 4,543,267 to 4,544,649 _04265 ECD_04266: ECD_04266 - trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor, at 4,544,670 to 4,545,902 _04266 Position (kb) 4543 4544 4545Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4542.293 kb on + strandat 4542.317 kb on + strandat 4542.412 kb on + strand, within ECD_04264at 4542.627 kb on + strand, within ECD_04264at 4542.627 kb on + strand, within ECD_04264at 4542.627 kb on + strand, within ECD_04264at 4542.711 kb on + strand, within ECD_04264at 4542.870 kb on + strand, within ECD_04264at 4542.871 kb on - strand, within ECD_04264at 4542.886 kb on + strand, within ECD_04264at 4542.887 kb on - strand, within ECD_04264at 4542.991 kb on + strand, within ECD_04264at 4542.991 kb on + strand, within ECD_04264at 4543.216 kb on + strandat 4543.526 kb on + strand, within ECD_04265at 4543.526 kb on + strand, within ECD_04265at 4543.527 kb on - strand, within ECD_04265at 4543.646 kb on - strand, within ECD_04265at 4543.646 kb on - strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.723 kb on - strand, within ECD_04265at 4543.723 kb on - strand, within ECD_04265at 4543.790 kb on + strand, within ECD_04265at 4543.790 kb on + strand, within ECD_04265at 4543.826 kb on + strand, within ECD_04265at 4543.826 kb on + strand, within ECD_04265at 4543.827 kb on - strand, within ECD_04265at 4543.827 kb on - strand, within ECD_04265at 4543.827 kb on - strand, within ECD_04265at 4543.873 kb on + strand, within ECD_04265at 4543.974 kb on + strand, within ECD_04265at 4543.975 kb on - strand, within ECD_04265at 4544.391 kb on - strand, within ECD_04265at 4544.645 kb on + strandat 4544.645 kb on + strandat 4544.645 kb on + strandat 4544.645 kb on + strandat 4544.646 kb on - strandat 4544.647 kb on + strandat 4544.647 kb on + strandat 4544.647 kb on + strandat 4544.648 kb on - strandat 4544.669 kb on + strandat 4544.669 kb on + strandat 4544.669 kb on + strandat 4544.669 kb on + strandat 4544.723 kb on - strandat 4544.723 kb on - strandat 4544.747 kb on + strandat 4544.747 kb on + strandat 4544.764 kb on + strandat 4544.876 kb on - strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.914 kb on - strand, within ECD_04266at 4544.914 kb on - strand, within ECD_04266at 4545.066 kb on + strand, within ECD_04266at 4545.195 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.226 kb on - strand, within ECD_04266at 4545.226 kb on - strand, within ECD_04266at 4545.227 kb on + strand, within ECD_04266at 4545.228 kb on - strand, within ECD_04266at 4545.228 kb on - strand, within ECD_04266at 4545.273 kb on - strand, within ECD_04266at 4545.330 kb on + strand, within ECD_04266at 4545.330 kb on + strand, within ECD_04266at 4545.330 kb on + strand, within ECD_04266at 4545.331 kb on - strand, within ECD_04266at 4545.332 kb on + strand, within ECD_04266at 4545.332 kb on + strand, within ECD_04266at 4545.333 kb on - strand, within ECD_04266at 4545.333 kb on - strand, within ECD_04266at 4545.333 kb on - strand, within ECD_04266at 4545.361 kb on + strand, within ECD_04266at 4545.361 kb on + strand, within ECD_04266at 4545.429 kb on - strand, within ECD_04266at 4545.468 kb on + strand, within ECD_04266at 4545.633 kb on + strand, within ECD_04266

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas24
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4,542,293 + +0.4
4,542,317 + +0.6
4,542,412 + ECD_04264 0.17 +1.8
4,542,627 + ECD_04264 0.39 +1.2
4,542,627 + ECD_04264 0.39 +1.4
4,542,627 + ECD_04264 0.39 +0.5
4,542,711 + ECD_04264 0.48 +0.8
4,542,870 + ECD_04264 0.64 -0.4
4,542,871 - ECD_04264 0.64 -0.4
4,542,886 + ECD_04264 0.66 +2.0
4,542,887 - ECD_04264 0.66 -1.0
4,542,991 + ECD_04264 0.76 +0.9
4,542,991 + ECD_04264 0.76 +0.9
4,543,216 + -2.0
4,543,526 + ECD_04265 0.19 -0.9
4,543,526 + ECD_04265 0.19 +0.9
4,543,527 - ECD_04265 0.19 -0.8
4,543,646 - ECD_04265 0.27 -2.1
4,543,646 - ECD_04265 0.27 -1.3
4,543,722 + ECD_04265 0.33 -0.5
4,543,722 + ECD_04265 0.33 -0.6
4,543,722 + ECD_04265 0.33 -0.7
4,543,722 + ECD_04265 0.33 +1.3
4,543,722 + ECD_04265 0.33 -0.7
4,543,723 - ECD_04265 0.33 -0.9
4,543,723 - ECD_04265 0.33 -1.6
4,543,790 + ECD_04265 0.38 +0.0
4,543,790 + ECD_04265 0.38 +1.1
4,543,826 + ECD_04265 0.40 -0.1
4,543,826 + ECD_04265 0.40 -0.9
4,543,827 - ECD_04265 0.40 -0.2
4,543,827 - ECD_04265 0.40 -2.8
4,543,827 - ECD_04265 0.40 -1.5
4,543,873 + ECD_04265 0.44 -0.2
4,543,974 + ECD_04265 0.51 -0.5
4,543,975 - ECD_04265 0.51 -2.4
4,544,391 - ECD_04265 0.81 -2.7
4,544,645 + +0.2
4,544,645 + -0.3
4,544,645 + +0.3
4,544,645 + -0.3
4,544,646 - -2.2
4,544,647 + -0.8
4,544,647 + +1.1
4,544,647 + +0.6
4,544,648 - -0.8
4,544,669 + -2.5
4,544,669 + -1.3
4,544,669 + -1.4
4,544,669 + -1.1
4,544,723 - -2.6
4,544,723 - -1.3
4,544,747 + -2.9
4,544,747 + -0.7
4,544,764 + -0.2
4,544,876 - ECD_04266 0.17 -0.1
4,544,909 + ECD_04266 0.19 -1.0
4,544,909 + ECD_04266 0.19 -1.0
4,544,909 + ECD_04266 0.19 -0.4
4,544,909 + ECD_04266 0.19 +0.0
4,544,909 + ECD_04266 0.19 -0.1
4,544,910 - ECD_04266 0.19 +0.5
4,544,910 - ECD_04266 0.19 -0.5
4,544,910 - ECD_04266 0.19 -0.8
4,544,910 - ECD_04266 0.19 -1.4
4,544,910 - ECD_04266 0.19 -1.0
4,544,910 - ECD_04266 0.19 -2.6
4,544,913 + ECD_04266 0.20 -0.5
4,544,913 + ECD_04266 0.20 -1.8
4,544,913 + ECD_04266 0.20 -0.4
4,544,913 + ECD_04266 0.20 -0.8
4,544,913 + ECD_04266 0.20 -3.0
4,544,914 - ECD_04266 0.20 -2.2
4,544,914 - ECD_04266 0.20 -0.6
4,545,066 + ECD_04266 0.32 +1.0
4,545,195 + ECD_04266 0.43 -0.9
4,545,225 + ECD_04266 0.45 -1.9
4,545,225 + ECD_04266 0.45 -0.4
4,545,225 + ECD_04266 0.45 +0.1
4,545,225 + ECD_04266 0.45 -1.5
4,545,226 - ECD_04266 0.45 -1.3
4,545,226 - ECD_04266 0.45 -0.9
4,545,227 + ECD_04266 0.45 -2.3
4,545,228 - ECD_04266 0.45 -1.8
4,545,228 - ECD_04266 0.45 -2.3
4,545,273 - ECD_04266 0.49 -0.3
4,545,330 + ECD_04266 0.54 -0.8
4,545,330 + ECD_04266 0.54 -0.6
4,545,330 + ECD_04266 0.54 -1.1
4,545,331 - ECD_04266 0.54 -1.7
4,545,332 + ECD_04266 0.54 +0.0
4,545,332 + ECD_04266 0.54 +0.4
4,545,333 - ECD_04266 0.54 -0.2
4,545,333 - ECD_04266 0.54 -1.1
4,545,333 - ECD_04266 0.54 +0.0
4,545,361 + ECD_04266 0.56 -1.4
4,545,361 + ECD_04266 0.56 -1.7
4,545,429 - ECD_04266 0.62 -1.3
4,545,468 + ECD_04266 0.65 -1.6
4,545,633 + ECD_04266 0.78 -0.6

Or see this region's nucleotide sequence