Strain Fitness in Escherichia coli BL21 around ECD_03755

Experiment: Bas24

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03754 and ECD_03755 are separated by 285 nucleotidesECD_03755 and ECD_03756 are separated by 372 nucleotides ECD_03754: ECD_03754 - sensory histidine kinase in two-component regulatory system with GlnG, at 3,961,988 to 3,963,037 _03754 ECD_03755: ECD_03755 - glutamine synthetase, at 3,963,323 to 3,964,732 _03755 ECD_03756: ECD_03756 - GTP-binding protein, at 3,965,105 to 3,966,928 _03756 Position (kb) 3963 3964 3965Strain fitness (log2 ratio) -2 -1 0 1 2at 3962.367 kb on + strand, within ECD_03754at 3962.418 kb on - strand, within ECD_03754at 3962.536 kb on + strand, within ECD_03754at 3962.536 kb on + strand, within ECD_03754at 3962.537 kb on - strand, within ECD_03754at 3962.537 kb on - strand, within ECD_03754at 3962.539 kb on - strand, within ECD_03754at 3962.539 kb on - strand, within ECD_03754at 3962.639 kb on + strand, within ECD_03754at 3962.672 kb on + strand, within ECD_03754at 3962.672 kb on + strand, within ECD_03754at 3962.672 kb on + strand, within ECD_03754at 3962.672 kb on + strand, within ECD_03754at 3962.672 kb on + strand, within ECD_03754at 3962.673 kb on - strand, within ECD_03754at 3962.673 kb on - strand, within ECD_03754at 3962.673 kb on - strand, within ECD_03754at 3962.743 kb on + strand, within ECD_03754at 3962.744 kb on - strand, within ECD_03754at 3962.851 kb on + strand, within ECD_03754at 3962.851 kb on + strand, within ECD_03754at 3962.855 kb on + strand, within ECD_03754at 3962.866 kb on - strand, within ECD_03754at 3962.866 kb on - strand, within ECD_03754at 3963.038 kb on - strandat 3963.093 kb on + strandat 3963.150 kb on + strandat 3963.150 kb on + strandat 3963.156 kb on + strandat 3963.202 kb on - strandat 3963.324 kb on + strandat 3963.334 kb on - strandat 3963.406 kb on - strandat 3963.406 kb on - strandat 3963.587 kb on - strand, within ECD_03755at 3963.698 kb on - strand, within ECD_03755at 3963.730 kb on - strand, within ECD_03755at 3963.730 kb on - strand, within ECD_03755at 3963.775 kb on - strand, within ECD_03755at 3963.775 kb on - strand, within ECD_03755at 3963.841 kb on - strand, within ECD_03755at 3963.841 kb on - strand, within ECD_03755at 3963.844 kb on - strand, within ECD_03755at 3963.871 kb on - strand, within ECD_03755at 3963.996 kb on - strand, within ECD_03755at 3964.012 kb on - strand, within ECD_03755at 3964.012 kb on - strand, within ECD_03755at 3964.012 kb on - strand, within ECD_03755at 3964.012 kb on - strand, within ECD_03755at 3964.012 kb on - strand, within ECD_03755at 3964.012 kb on - strand, within ECD_03755at 3964.092 kb on - strand, within ECD_03755at 3964.160 kb on - strand, within ECD_03755at 3964.240 kb on - strand, within ECD_03755at 3964.359 kb on - strand, within ECD_03755at 3964.390 kb on - strand, within ECD_03755at 3964.658 kb on - strandat 3964.658 kb on - strandat 3964.715 kb on + strandat 3964.732 kb on + strandat 3964.733 kb on - strandat 3964.733 kb on - strandat 3964.738 kb on - strandat 3964.738 kb on - strandat 3964.786 kb on - strandat 3964.786 kb on - strandat 3964.913 kb on + strandat 3964.914 kb on - strandat 3964.914 kb on - strandat 3964.914 kb on - strandat 3964.976 kb on + strandat 3965.014 kb on - strandat 3965.014 kb on - strandat 3965.014 kb on - strandat 3965.080 kb on + strandat 3965.125 kb on + strandat 3965.146 kb on - strandat 3965.146 kb on - strandat 3965.146 kb on - strandat 3965.156 kb on - strandat 3965.156 kb on - strandat 3965.170 kb on - strandat 3965.311 kb on + strand, within ECD_03756at 3965.367 kb on + strand, within ECD_03756at 3965.367 kb on + strand, within ECD_03756at 3965.368 kb on - strand, within ECD_03756at 3965.368 kb on - strand, within ECD_03756at 3965.379 kb on + strand, within ECD_03756at 3965.379 kb on + strand, within ECD_03756at 3965.380 kb on - strand, within ECD_03756at 3965.380 kb on - strand, within ECD_03756at 3965.482 kb on + strand, within ECD_03756at 3965.638 kb on + strand, within ECD_03756at 3965.639 kb on - strand, within ECD_03756

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas24
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3,962,367 + ECD_03754 0.36 -2.1
3,962,418 - ECD_03754 0.41 +1.0
3,962,536 + ECD_03754 0.52 +0.7
3,962,536 + ECD_03754 0.52 +0.2
3,962,537 - ECD_03754 0.52 +1.6
3,962,537 - ECD_03754 0.52 +1.5
3,962,539 - ECD_03754 0.52 +0.4
3,962,539 - ECD_03754 0.52 +2.2
3,962,639 + ECD_03754 0.62 +0.7
3,962,672 + ECD_03754 0.65 +0.2
3,962,672 + ECD_03754 0.65 -0.9
3,962,672 + ECD_03754 0.65 -0.3
3,962,672 + ECD_03754 0.65 +0.3
3,962,672 + ECD_03754 0.65 +0.1
3,962,673 - ECD_03754 0.65 -0.1
3,962,673 - ECD_03754 0.65 +1.2
3,962,673 - ECD_03754 0.65 -1.5
3,962,743 + ECD_03754 0.72 +0.3
3,962,744 - ECD_03754 0.72 -1.0
3,962,851 + ECD_03754 0.82 -0.4
3,962,851 + ECD_03754 0.82 +1.0
3,962,855 + ECD_03754 0.83 -0.6
3,962,866 - ECD_03754 0.84 -0.6
3,962,866 - ECD_03754 0.84 +0.7
3,963,038 - +0.6
3,963,093 + -0.6
3,963,150 + -1.6
3,963,150 + +0.1
3,963,156 + +0.4
3,963,202 - -1.6
3,963,324 + +0.9
3,963,334 - +0.7
3,963,406 - -0.4
3,963,406 - +1.3
3,963,587 - ECD_03755 0.19 +0.5
3,963,698 - ECD_03755 0.27 +0.9
3,963,730 - ECD_03755 0.29 +2.1
3,963,730 - ECD_03755 0.29 -1.8
3,963,775 - ECD_03755 0.32 +0.2
3,963,775 - ECD_03755 0.32 +1.1
3,963,841 - ECD_03755 0.37 +0.0
3,963,841 - ECD_03755 0.37 +2.1
3,963,844 - ECD_03755 0.37 +1.9
3,963,871 - ECD_03755 0.39 +0.2
3,963,996 - ECD_03755 0.48 +1.0
3,964,012 - ECD_03755 0.49 +0.0
3,964,012 - ECD_03755 0.49 +1.0
3,964,012 - ECD_03755 0.49 +1.1
3,964,012 - ECD_03755 0.49 +0.8
3,964,012 - ECD_03755 0.49 +0.7
3,964,012 - ECD_03755 0.49 +0.9
3,964,092 - ECD_03755 0.55 +1.1
3,964,160 - ECD_03755 0.59 -0.5
3,964,240 - ECD_03755 0.65 +0.8
3,964,359 - ECD_03755 0.73 -1.9
3,964,390 - ECD_03755 0.76 +0.1
3,964,658 - +0.4
3,964,658 - +0.3
3,964,715 + +1.8
3,964,732 + +0.7
3,964,733 - -1.3
3,964,733 - -0.9
3,964,738 - +0.4
3,964,738 - +0.6
3,964,786 - -0.2
3,964,786 - +0.3
3,964,913 + +1.0
3,964,914 - -0.5
3,964,914 - -0.1
3,964,914 - +0.1
3,964,976 + -1.3
3,965,014 - -0.8
3,965,014 - +0.1
3,965,014 - +1.4
3,965,080 + -1.2
3,965,125 + +0.8
3,965,146 - +0.5
3,965,146 - +0.8
3,965,146 - +0.9
3,965,156 - +2.2
3,965,156 - +0.9
3,965,170 - +1.4
3,965,311 + ECD_03756 0.11 +1.5
3,965,367 + ECD_03756 0.14 +1.2
3,965,367 + ECD_03756 0.14 +0.1
3,965,368 - ECD_03756 0.14 +1.4
3,965,368 - ECD_03756 0.14 +1.6
3,965,379 + ECD_03756 0.15 +0.8
3,965,379 + ECD_03756 0.15 +0.6
3,965,380 - ECD_03756 0.15 +0.8
3,965,380 - ECD_03756 0.15 +0.7
3,965,482 + ECD_03756 0.21 +1.0
3,965,638 + ECD_03756 0.29 +0.4
3,965,639 - ECD_03756 0.29 +1.0

Or see this region's nucleotide sequence