Strain Fitness in Escherichia coli BL21 around ECD_02751

Experiment: Bas24

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02749 and ECD_02750 are separated by 10 nucleotidesECD_02750 and ECD_02751 are separated by 23 nucleotidesECD_02751 and ECD_02752 overlap by 4 nucleotides ECD_02749: ECD_02749 - membrane ATPase/protein kinase, at 2,893,845 to 2,894,840 _02749 ECD_02750: ECD_02750 - methylmalonyl-CoA decarboxylase, biotin-independent, at 2,894,851 to 2,895,636 _02750 ECD_02751: ECD_02751 - propionyl-CoA:succinate CoA transferase, at 2,895,660 to 2,897,138 _02751 ECD_02752: ECD_02752 - putative DNA-binding transcriptional regulator, at 2,897,135 to 2,898,031 _02752 Position (kb) 2895 2896 2897 2898Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2894.681 kb on + strand, within ECD_02749at 2894.701 kb on + strand, within ECD_02749at 2894.701 kb on + strand, within ECD_02749at 2894.701 kb on + strand, within ECD_02749at 2894.701 kb on + strand, within ECD_02749at 2894.701 kb on + strand, within ECD_02749at 2894.739 kb on + strand, within ECD_02749at 2894.774 kb on + strandat 2894.933 kb on + strand, within ECD_02750at 2895.000 kb on + strand, within ECD_02750at 2895.051 kb on + strand, within ECD_02750at 2895.091 kb on + strand, within ECD_02750at 2895.091 kb on + strand, within ECD_02750at 2895.091 kb on + strand, within ECD_02750at 2895.092 kb on - strand, within ECD_02750at 2895.092 kb on - strand, within ECD_02750at 2895.092 kb on - strand, within ECD_02750at 2895.166 kb on - strand, within ECD_02750at 2895.269 kb on - strand, within ECD_02750at 2895.336 kb on + strand, within ECD_02750at 2895.425 kb on + strand, within ECD_02750at 2895.495 kb on - strand, within ECD_02750at 2895.495 kb on - strand, within ECD_02750at 2895.537 kb on + strand, within ECD_02750at 2895.562 kb on + strandat 2895.562 kb on + strandat 2895.613 kb on - strandat 2895.716 kb on + strandat 2895.769 kb on + strandat 2895.874 kb on + strand, within ECD_02751at 2895.874 kb on + strand, within ECD_02751at 2895.936 kb on - strand, within ECD_02751at 2896.005 kb on + strand, within ECD_02751at 2896.005 kb on + strand, within ECD_02751at 2896.006 kb on - strand, within ECD_02751at 2896.149 kb on + strand, within ECD_02751at 2896.181 kb on + strand, within ECD_02751at 2896.257 kb on + strand, within ECD_02751at 2896.322 kb on + strand, within ECD_02751at 2896.322 kb on + strand, within ECD_02751at 2896.322 kb on + strand, within ECD_02751at 2896.323 kb on - strand, within ECD_02751at 2896.323 kb on - strand, within ECD_02751at 2896.323 kb on - strand, within ECD_02751at 2896.381 kb on + strand, within ECD_02751at 2896.382 kb on - strand, within ECD_02751at 2896.382 kb on - strand, within ECD_02751at 2896.454 kb on + strand, within ECD_02751at 2896.502 kb on + strand, within ECD_02751at 2896.509 kb on + strand, within ECD_02751at 2896.509 kb on + strand, within ECD_02751at 2896.509 kb on + strand, within ECD_02751at 2896.510 kb on - strand, within ECD_02751at 2896.522 kb on + strand, within ECD_02751at 2896.522 kb on + strand, within ECD_02751at 2896.544 kb on - strand, within ECD_02751at 2896.626 kb on - strand, within ECD_02751at 2896.737 kb on - strand, within ECD_02751at 2896.824 kb on + strand, within ECD_02751at 2896.824 kb on + strand, within ECD_02751at 2896.825 kb on - strand, within ECD_02751at 2896.838 kb on + strand, within ECD_02751at 2896.856 kb on + strand, within ECD_02751at 2896.856 kb on + strand, within ECD_02751at 2896.992 kb on - strandat 2896.992 kb on - strandat 2897.000 kb on + strandat 2897.001 kb on - strandat 2897.001 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.016 kb on - strandat 2897.019 kb on + strandat 2897.040 kb on + strandat 2897.066 kb on + strandat 2897.066 kb on + strandat 2897.067 kb on - strandat 2897.099 kb on - strandat 2897.099 kb on - strandat 2897.167 kb on + strandat 2897.167 kb on + strandat 2897.189 kb on - strandat 2897.189 kb on - strandat 2897.189 kb on - strandat 2897.189 kb on - strandat 2897.211 kb on + strandat 2897.227 kb on + strand, within ECD_02752at 2897.227 kb on + strand, within ECD_02752at 2897.229 kb on + strand, within ECD_02752at 2897.229 kb on + strand, within ECD_02752at 2897.229 kb on + strand, within ECD_02752at 2897.229 kb on + strand, within ECD_02752at 2897.229 kb on + strand, within ECD_02752at 2897.230 kb on - strand, within ECD_02752at 2897.230 kb on - strand, within ECD_02752at 2897.230 kb on - strand, within ECD_02752at 2897.230 kb on - strand, within ECD_02752at 2897.348 kb on - strand, within ECD_02752at 2897.365 kb on - strand, within ECD_02752at 2897.368 kb on + strand, within ECD_02752at 2897.451 kb on - strand, within ECD_02752at 2897.497 kb on - strand, within ECD_02752at 2897.534 kb on + strand, within ECD_02752at 2897.535 kb on - strand, within ECD_02752at 2897.535 kb on - strand, within ECD_02752at 2897.546 kb on - strand, within ECD_02752at 2897.579 kb on + strand, within ECD_02752at 2897.596 kb on + strand, within ECD_02752at 2897.597 kb on - strand, within ECD_02752at 2897.597 kb on - strand, within ECD_02752at 2897.679 kb on + strand, within ECD_02752at 2897.680 kb on - strand, within ECD_02752at 2897.683 kb on + strand, within ECD_02752at 2897.684 kb on - strand, within ECD_02752at 2897.713 kb on + strand, within ECD_02752at 2897.728 kb on + strand, within ECD_02752at 2897.728 kb on + strand, within ECD_02752at 2897.728 kb on + strand, within ECD_02752at 2897.729 kb on - strand, within ECD_02752at 2897.729 kb on - strand, within ECD_02752at 2897.731 kb on + strand, within ECD_02752at 2897.731 kb on + strand, within ECD_02752at 2897.732 kb on - strand, within ECD_02752at 2897.732 kb on - strand, within ECD_02752at 2897.735 kb on + strand, within ECD_02752at 2897.773 kb on + strand, within ECD_02752at 2897.882 kb on + strand, within ECD_02752at 2897.887 kb on + strand, within ECD_02752at 2897.888 kb on - strand, within ECD_02752at 2897.990 kb on + strandat 2898.076 kb on + strandat 2898.103 kb on + strandat 2898.103 kb on + strandat 2898.104 kb on - strandat 2898.111 kb on + strandat 2898.111 kb on + strandat 2898.111 kb on + strandat 2898.111 kb on + strandat 2898.111 kb on + strandat 2898.111 kb on + strandat 2898.111 kb on + strandat 2898.111 kb on + strandat 2898.112 kb on - strandat 2898.112 kb on - strandat 2898.112 kb on - strandat 2898.112 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas24
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2,894,681 + ECD_02749 0.84 +0.4
2,894,701 + ECD_02749 0.86 +0.1
2,894,701 + ECD_02749 0.86 +0.5
2,894,701 + ECD_02749 0.86 -0.3
2,894,701 + ECD_02749 0.86 +1.9
2,894,701 + ECD_02749 0.86 -0.4
2,894,739 + ECD_02749 0.90 -1.2
2,894,774 + +0.5
2,894,933 + ECD_02750 0.10 +2.2
2,895,000 + ECD_02750 0.19 -1.5
2,895,051 + ECD_02750 0.25 +1.3
2,895,091 + ECD_02750 0.31 -0.9
2,895,091 + ECD_02750 0.31 +1.0
2,895,091 + ECD_02750 0.31 -1.5
2,895,092 - ECD_02750 0.31 +0.9
2,895,092 - ECD_02750 0.31 -0.4
2,895,092 - ECD_02750 0.31 +1.4
2,895,166 - ECD_02750 0.40 -0.0
2,895,269 - ECD_02750 0.53 -1.4
2,895,336 + ECD_02750 0.62 -2.8
2,895,425 + ECD_02750 0.73 +0.1
2,895,495 - ECD_02750 0.82 +0.8
2,895,495 - ECD_02750 0.82 +1.0
2,895,537 + ECD_02750 0.87 -0.3
2,895,562 + +0.1
2,895,562 + -3.2
2,895,613 - -0.3
2,895,716 + -1.4
2,895,769 + -0.2
2,895,874 + ECD_02751 0.14 -0.1
2,895,874 + ECD_02751 0.14 +0.3
2,895,936 - ECD_02751 0.19 +1.8
2,896,005 + ECD_02751 0.23 +0.6
2,896,005 + ECD_02751 0.23 +1.2
2,896,006 - ECD_02751 0.23 -0.9
2,896,149 + ECD_02751 0.33 -1.5
2,896,181 + ECD_02751 0.35 +0.7
2,896,257 + ECD_02751 0.40 +1.4
2,896,322 + ECD_02751 0.45 -0.2
2,896,322 + ECD_02751 0.45 +0.0
2,896,322 + ECD_02751 0.45 -0.2
2,896,323 - ECD_02751 0.45 +1.1
2,896,323 - ECD_02751 0.45 +0.9
2,896,323 - ECD_02751 0.45 +0.6
2,896,381 + ECD_02751 0.49 +0.9
2,896,382 - ECD_02751 0.49 +0.6
2,896,382 - ECD_02751 0.49 +0.9
2,896,454 + ECD_02751 0.54 +1.1
2,896,502 + ECD_02751 0.57 -2.1
2,896,509 + ECD_02751 0.57 +0.7
2,896,509 + ECD_02751 0.57 -1.2
2,896,509 + ECD_02751 0.57 -1.2
2,896,510 - ECD_02751 0.57 +0.1
2,896,522 + ECD_02751 0.58 +0.3
2,896,522 + ECD_02751 0.58 +0.7
2,896,544 - ECD_02751 0.60 +0.5
2,896,626 - ECD_02751 0.65 -0.6
2,896,737 - ECD_02751 0.73 +2.0
2,896,824 + ECD_02751 0.79 -0.4
2,896,824 + ECD_02751 0.79 -0.6
2,896,825 - ECD_02751 0.79 +2.3
2,896,838 + ECD_02751 0.80 +0.7
2,896,856 + ECD_02751 0.81 -0.6
2,896,856 + ECD_02751 0.81 -1.3
2,896,992 - +1.5
2,896,992 - +3.4
2,897,000 + +1.2
2,897,001 - -0.5
2,897,001 - -1.2
2,897,016 - +0.6
2,897,016 - +0.1
2,897,016 - -0.4
2,897,016 - -1.8
2,897,016 - -0.4
2,897,016 - +0.4
2,897,016 - +0.1
2,897,016 - +0.2
2,897,016 - +0.3
2,897,019 + -0.9
2,897,040 + +0.9
2,897,066 + +0.5
2,897,066 + -0.4
2,897,067 - +0.4
2,897,099 - +1.1
2,897,099 - +0.9
2,897,167 + -0.6
2,897,167 + +0.6
2,897,189 - +1.0
2,897,189 - -0.2
2,897,189 - -0.4
2,897,189 - +0.0
2,897,211 + +1.1
2,897,227 + ECD_02752 0.10 +1.3
2,897,227 + ECD_02752 0.10 -0.7
2,897,229 + ECD_02752 0.10 +0.4
2,897,229 + ECD_02752 0.10 -0.5
2,897,229 + ECD_02752 0.10 +0.8
2,897,229 + ECD_02752 0.10 +0.6
2,897,229 + ECD_02752 0.10 -0.7
2,897,230 - ECD_02752 0.11 -0.6
2,897,230 - ECD_02752 0.11 -0.3
2,897,230 - ECD_02752 0.11 +1.0
2,897,230 - ECD_02752 0.11 -0.6
2,897,348 - ECD_02752 0.24 +0.4
2,897,365 - ECD_02752 0.26 -0.4
2,897,368 + ECD_02752 0.26 +0.3
2,897,451 - ECD_02752 0.35 +0.9
2,897,497 - ECD_02752 0.40 +0.1
2,897,534 + ECD_02752 0.44 -3.3
2,897,535 - ECD_02752 0.45 +0.8
2,897,535 - ECD_02752 0.45 +0.3
2,897,546 - ECD_02752 0.46 +1.0
2,897,579 + ECD_02752 0.49 -2.6
2,897,596 + ECD_02752 0.51 +0.5
2,897,597 - ECD_02752 0.52 -2.1
2,897,597 - ECD_02752 0.52 +1.3
2,897,679 + ECD_02752 0.61 +0.0
2,897,680 - ECD_02752 0.61 -0.4
2,897,683 + ECD_02752 0.61 +0.9
2,897,684 - ECD_02752 0.61 -1.5
2,897,713 + ECD_02752 0.64 +0.5
2,897,728 + ECD_02752 0.66 +1.5
2,897,728 + ECD_02752 0.66 +1.7
2,897,728 + ECD_02752 0.66 +0.8
2,897,729 - ECD_02752 0.66 +0.1
2,897,729 - ECD_02752 0.66 +0.7
2,897,731 + ECD_02752 0.66 -1.8
2,897,731 + ECD_02752 0.66 +0.2
2,897,732 - ECD_02752 0.67 -1.2
2,897,732 - ECD_02752 0.67 +0.3
2,897,735 + ECD_02752 0.67 +0.5
2,897,773 + ECD_02752 0.71 +1.2
2,897,882 + ECD_02752 0.83 -1.0
2,897,887 + ECD_02752 0.84 +0.1
2,897,888 - ECD_02752 0.84 -0.6
2,897,990 + -0.6
2,898,076 + -0.9
2,898,103 + +0.8
2,898,103 + -0.4
2,898,104 - +1.7
2,898,111 + +1.0
2,898,111 + -1.3
2,898,111 + -0.7
2,898,111 + +0.1
2,898,111 + -0.8
2,898,111 + -1.8
2,898,111 + -0.7
2,898,111 + -0.7
2,898,112 - +1.7
2,898,112 - +0.0
2,898,112 - -0.3
2,898,112 - +0.7

Or see this region's nucleotide sequence