Strain Fitness in Escherichia coli BL21 around ECD_02716

Experiment: Bas24

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02715 and ECD_02716 are separated by 14 nucleotidesECD_02716 and ECD_02717 are separated by 35 nucleotides ECD_02715: ECD_02715 - xanthine permease, at 2,855,212 to 2,856,612 _02715 ECD_02716: ECD_02716 - guanine deaminase, at 2,856,627 to 2,857,946 _02716 ECD_02717: ECD_02717 - guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter, at 2,857,982 to 2,859,349 _02717 Position (kb) 2856 2857 2858Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2855.632 kb on + strand, within ECD_02715at 2855.633 kb on - strand, within ECD_02715at 2855.637 kb on - strand, within ECD_02715at 2855.637 kb on - strand, within ECD_02715at 2855.649 kb on + strand, within ECD_02715at 2855.649 kb on + strand, within ECD_02715at 2855.668 kb on - strand, within ECD_02715at 2855.676 kb on - strand, within ECD_02715at 2855.690 kb on + strand, within ECD_02715at 2855.691 kb on - strand, within ECD_02715at 2855.691 kb on - strand, within ECD_02715at 2855.700 kb on + strand, within ECD_02715at 2855.752 kb on - strand, within ECD_02715at 2855.752 kb on - strand, within ECD_02715at 2855.764 kb on + strand, within ECD_02715at 2855.764 kb on + strand, within ECD_02715at 2855.764 kb on + strand, within ECD_02715at 2855.764 kb on + strand, within ECD_02715at 2855.764 kb on + strand, within ECD_02715at 2855.764 kb on + strand, within ECD_02715at 2855.765 kb on - strand, within ECD_02715at 2855.765 kb on - strand, within ECD_02715at 2855.795 kb on + strand, within ECD_02715at 2855.795 kb on + strand, within ECD_02715at 2855.795 kb on + strand, within ECD_02715at 2855.796 kb on - strand, within ECD_02715at 2855.837 kb on + strand, within ECD_02715at 2855.864 kb on + strand, within ECD_02715at 2855.864 kb on + strand, within ECD_02715at 2855.865 kb on - strand, within ECD_02715at 2855.875 kb on + strand, within ECD_02715at 2855.875 kb on + strand, within ECD_02715at 2855.875 kb on + strand, within ECD_02715at 2855.876 kb on - strand, within ECD_02715at 2855.876 kb on - strand, within ECD_02715at 2855.876 kb on - strand, within ECD_02715at 2855.876 kb on - strand, within ECD_02715at 2855.877 kb on + strand, within ECD_02715at 2855.916 kb on + strand, within ECD_02715at 2855.960 kb on - strand, within ECD_02715at 2855.974 kb on - strand, within ECD_02715at 2856.007 kb on + strand, within ECD_02715at 2856.016 kb on - strand, within ECD_02715at 2856.088 kb on + strand, within ECD_02715at 2856.161 kb on + strand, within ECD_02715at 2856.161 kb on + strand, within ECD_02715at 2856.186 kb on + strand, within ECD_02715at 2856.223 kb on + strand, within ECD_02715at 2856.224 kb on - strand, within ECD_02715at 2856.267 kb on - strand, within ECD_02715at 2856.386 kb on + strand, within ECD_02715at 2856.386 kb on + strand, within ECD_02715at 2856.405 kb on + strand, within ECD_02715at 2856.405 kb on + strand, within ECD_02715at 2856.405 kb on + strand, within ECD_02715at 2856.405 kb on + strand, within ECD_02715at 2856.406 kb on - strand, within ECD_02715at 2856.406 kb on - strand, within ECD_02715at 2856.406 kb on - strand, within ECD_02715at 2856.406 kb on - strand, within ECD_02715at 2856.406 kb on - strand, within ECD_02715at 2856.422 kb on + strand, within ECD_02715at 2856.422 kb on + strand, within ECD_02715at 2856.422 kb on + strand, within ECD_02715at 2856.429 kb on - strand, within ECD_02715at 2856.446 kb on - strand, within ECD_02715at 2856.446 kb on - strand, within ECD_02715at 2856.485 kb on - strandat 2856.488 kb on + strandat 2856.534 kb on - strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.540 kb on + strandat 2856.541 kb on - strandat 2856.585 kb on + strandat 2856.588 kb on + strandat 2856.588 kb on + strandat 2856.588 kb on + strandat 2856.616 kb on + strandat 2856.616 kb on + strandat 2856.616 kb on + strandat 2856.616 kb on + strandat 2856.649 kb on + strandat 2856.671 kb on + strandat 2856.672 kb on - strandat 2856.742 kb on + strandat 2856.742 kb on + strandat 2856.848 kb on - strand, within ECD_02716at 2856.850 kb on + strand, within ECD_02716at 2856.850 kb on + strand, within ECD_02716at 2856.851 kb on - strand, within ECD_02716at 2856.872 kb on + strand, within ECD_02716at 2856.872 kb on + strand, within ECD_02716at 2856.872 kb on + strand, within ECD_02716at 2856.873 kb on - strand, within ECD_02716at 2856.907 kb on - strand, within ECD_02716at 2856.907 kb on - strand, within ECD_02716at 2856.907 kb on - strand, within ECD_02716at 2856.935 kb on + strand, within ECD_02716at 2856.935 kb on + strand, within ECD_02716at 2856.973 kb on + strand, within ECD_02716at 2856.974 kb on - strand, within ECD_02716at 2856.978 kb on + strand, within ECD_02716at 2857.018 kb on + strand, within ECD_02716at 2857.019 kb on - strand, within ECD_02716at 2857.022 kb on + strand, within ECD_02716at 2857.106 kb on + strand, within ECD_02716at 2857.106 kb on + strand, within ECD_02716at 2857.106 kb on + strand, within ECD_02716at 2857.106 kb on + strand, within ECD_02716at 2857.106 kb on + strand, within ECD_02716at 2857.107 kb on - strand, within ECD_02716at 2857.107 kb on - strand, within ECD_02716at 2857.107 kb on - strand, within ECD_02716at 2857.112 kb on + strand, within ECD_02716at 2857.113 kb on - strand, within ECD_02716at 2857.113 kb on - strand, within ECD_02716at 2857.155 kb on + strand, within ECD_02716at 2857.155 kb on + strand, within ECD_02716at 2857.234 kb on + strand, within ECD_02716at 2857.234 kb on + strand, within ECD_02716at 2857.235 kb on - strand, within ECD_02716at 2857.235 kb on - strand, within ECD_02716at 2857.235 kb on - strand, within ECD_02716at 2857.235 kb on - strand, within ECD_02716at 2857.235 kb on - strand, within ECD_02716at 2857.235 kb on - strand, within ECD_02716at 2857.236 kb on + strand, within ECD_02716at 2857.237 kb on - strand, within ECD_02716at 2857.237 kb on - strand, within ECD_02716at 2857.331 kb on + strand, within ECD_02716at 2857.331 kb on + strand, within ECD_02716at 2857.410 kb on + strand, within ECD_02716at 2857.586 kb on + strand, within ECD_02716at 2857.586 kb on + strand, within ECD_02716at 2857.586 kb on + strand, within ECD_02716at 2857.656 kb on + strand, within ECD_02716at 2857.663 kb on + strand, within ECD_02716at 2857.663 kb on + strand, within ECD_02716at 2857.664 kb on - strand, within ECD_02716at 2857.672 kb on + strand, within ECD_02716at 2857.673 kb on - strand, within ECD_02716at 2857.696 kb on - strand, within ECD_02716at 2857.819 kb on + strandat 2857.820 kb on - strandat 2857.902 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.911 kb on + strandat 2857.912 kb on - strandat 2857.912 kb on - strandat 2857.912 kb on - strandat 2857.912 kb on - strandat 2857.912 kb on - strandat 2857.933 kb on - strandat 2857.945 kb on - strandat 2857.945 kb on - strandat 2857.945 kb on - strandat 2857.945 kb on - strandat 2857.947 kb on + strandat 2857.947 kb on + strandat 2857.947 kb on + strandat 2857.948 kb on - strandat 2857.951 kb on - strandat 2857.981 kb on + strandat 2857.981 kb on + strandat 2857.981 kb on + strandat 2857.981 kb on + strandat 2857.981 kb on + strandat 2857.981 kb on + strandat 2857.981 kb on + strandat 2857.981 kb on + strandat 2857.982 kb on - strandat 2857.982 kb on - strandat 2857.982 kb on - strandat 2857.982 kb on - strandat 2857.982 kb on - strandat 2857.982 kb on - strandat 2857.982 kb on - strandat 2857.998 kb on + strandat 2857.998 kb on + strandat 2857.998 kb on + strandat 2857.998 kb on + strandat 2857.999 kb on - strandat 2857.999 kb on - strandat 2858.053 kb on + strandat 2858.085 kb on + strandat 2858.085 kb on + strandat 2858.086 kb on - strandat 2858.229 kb on + strand, within ECD_02717at 2858.315 kb on - strand, within ECD_02717at 2858.390 kb on - strand, within ECD_02717at 2858.390 kb on - strand, within ECD_02717at 2858.401 kb on - strand, within ECD_02717at 2858.401 kb on - strand, within ECD_02717at 2858.401 kb on - strand, within ECD_02717at 2858.401 kb on - strand, within ECD_02717at 2858.401 kb on - strand, within ECD_02717at 2858.405 kb on - strand, within ECD_02717at 2858.405 kb on - strand, within ECD_02717at 2858.431 kb on + strand, within ECD_02717at 2858.486 kb on - strand, within ECD_02717at 2858.630 kb on - strand, within ECD_02717at 2858.675 kb on + strand, within ECD_02717at 2858.675 kb on + strand, within ECD_02717at 2858.676 kb on - strand, within ECD_02717at 2858.719 kb on + strand, within ECD_02717at 2858.719 kb on + strand, within ECD_02717at 2858.720 kb on - strand, within ECD_02717at 2858.769 kb on + strand, within ECD_02717at 2858.770 kb on - strand, within ECD_02717at 2858.860 kb on + strand, within ECD_02717at 2858.910 kb on + strand, within ECD_02717at 2858.910 kb on + strand, within ECD_02717at 2858.910 kb on + strand, within ECD_02717

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas24
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2,855,632 + ECD_02715 0.30 -0.6
2,855,633 - ECD_02715 0.30 -0.5
2,855,637 - ECD_02715 0.30 +0.1
2,855,637 - ECD_02715 0.30 +0.8
2,855,649 + ECD_02715 0.31 +0.1
2,855,649 + ECD_02715 0.31 -0.2
2,855,668 - ECD_02715 0.33 +1.1
2,855,676 - ECD_02715 0.33 -3.1
2,855,690 + ECD_02715 0.34 +0.4
2,855,691 - ECD_02715 0.34 +0.2
2,855,691 - ECD_02715 0.34 +0.7
2,855,700 + ECD_02715 0.35 -0.3
2,855,752 - ECD_02715 0.39 +1.0
2,855,752 - ECD_02715 0.39 -1.7
2,855,764 + ECD_02715 0.39 +0.4
2,855,764 + ECD_02715 0.39 +0.1
2,855,764 + ECD_02715 0.39 +0.7
2,855,764 + ECD_02715 0.39 +0.8
2,855,764 + ECD_02715 0.39 -0.4
2,855,764 + ECD_02715 0.39 -0.4
2,855,765 - ECD_02715 0.39 +0.5
2,855,765 - ECD_02715 0.39 -0.3
2,855,795 + ECD_02715 0.42 -1.4
2,855,795 + ECD_02715 0.42 +0.4
2,855,795 + ECD_02715 0.42 +0.7
2,855,796 - ECD_02715 0.42 +0.6
2,855,837 + ECD_02715 0.45 -0.4
2,855,864 + ECD_02715 0.47 -0.2
2,855,864 + ECD_02715 0.47 +0.2
2,855,865 - ECD_02715 0.47 +0.8
2,855,875 + ECD_02715 0.47 +0.1
2,855,875 + ECD_02715 0.47 -0.2
2,855,875 + ECD_02715 0.47 -0.3
2,855,876 - ECD_02715 0.47 -1.0
2,855,876 - ECD_02715 0.47 -0.7
2,855,876 - ECD_02715 0.47 +0.9
2,855,876 - ECD_02715 0.47 +0.8
2,855,877 + ECD_02715 0.47 +0.1
2,855,916 + ECD_02715 0.50 -0.2
2,855,960 - ECD_02715 0.53 -0.6
2,855,974 - ECD_02715 0.54 -1.4
2,856,007 + ECD_02715 0.57 -2.5
2,856,016 - ECD_02715 0.57 +1.5
2,856,088 + ECD_02715 0.63 -0.7
2,856,161 + ECD_02715 0.68 +0.7
2,856,161 + ECD_02715 0.68 -1.1
2,856,186 + ECD_02715 0.70 +1.2
2,856,223 + ECD_02715 0.72 +0.0
2,856,224 - ECD_02715 0.72 +0.0
2,856,267 - ECD_02715 0.75 -1.7
2,856,386 + ECD_02715 0.84 -0.8
2,856,386 + ECD_02715 0.84 -0.8
2,856,405 + ECD_02715 0.85 +0.5
2,856,405 + ECD_02715 0.85 -1.7
2,856,405 + ECD_02715 0.85 +1.3
2,856,405 + ECD_02715 0.85 +1.3
2,856,406 - ECD_02715 0.85 -1.0
2,856,406 - ECD_02715 0.85 -0.0
2,856,406 - ECD_02715 0.85 -0.6
2,856,406 - ECD_02715 0.85 -1.1
2,856,406 - ECD_02715 0.85 +0.9
2,856,422 + ECD_02715 0.86 +0.8
2,856,422 + ECD_02715 0.86 -0.3
2,856,422 + ECD_02715 0.86 -0.5
2,856,429 - ECD_02715 0.87 +1.6
2,856,446 - ECD_02715 0.88 -0.2
2,856,446 - ECD_02715 0.88 +0.8
2,856,485 - +0.5
2,856,488 + -1.9
2,856,534 - -1.2
2,856,540 + -0.7
2,856,540 + -1.1
2,856,540 + -0.5
2,856,540 + +0.6
2,856,540 + -0.6
2,856,540 + -0.9
2,856,540 + -0.9
2,856,540 + -0.2
2,856,540 + -0.0
2,856,540 + +1.4
2,856,540 + -0.5
2,856,541 - -0.8
2,856,585 + +0.8
2,856,588 + -0.2
2,856,588 + +0.3
2,856,588 + +0.5
2,856,616 + +1.6
2,856,616 + +2.6
2,856,616 + -0.7
2,856,616 + -0.2
2,856,649 + -1.2
2,856,671 + +0.2
2,856,672 - -2.2
2,856,742 + +0.3
2,856,742 + +0.1
2,856,848 - ECD_02716 0.17 -0.0
2,856,850 + ECD_02716 0.17 -0.3
2,856,850 + ECD_02716 0.17 -0.3
2,856,851 - ECD_02716 0.17 -2.4
2,856,872 + ECD_02716 0.19 -0.4
2,856,872 + ECD_02716 0.19 -0.2
2,856,872 + ECD_02716 0.19 -0.6
2,856,873 - ECD_02716 0.19 -1.7
2,856,907 - ECD_02716 0.21 -2.6
2,856,907 - ECD_02716 0.21 +0.6
2,856,907 - ECD_02716 0.21 -1.1
2,856,935 + ECD_02716 0.23 +1.1
2,856,935 + ECD_02716 0.23 +0.5
2,856,973 + ECD_02716 0.26 +0.9
2,856,974 - ECD_02716 0.26 +0.7
2,856,978 + ECD_02716 0.27 +0.2
2,857,018 + ECD_02716 0.30 +0.2
2,857,019 - ECD_02716 0.30 -1.0
2,857,022 + ECD_02716 0.30 -0.7
2,857,106 + ECD_02716 0.36 +1.6
2,857,106 + ECD_02716 0.36 -2.0
2,857,106 + ECD_02716 0.36 +0.5
2,857,106 + ECD_02716 0.36 +0.1
2,857,106 + ECD_02716 0.36 +0.6
2,857,107 - ECD_02716 0.36 +2.5
2,857,107 - ECD_02716 0.36 -0.7
2,857,107 - ECD_02716 0.36 +0.5
2,857,112 + ECD_02716 0.37 +0.2
2,857,113 - ECD_02716 0.37 -0.7
2,857,113 - ECD_02716 0.37 -0.1
2,857,155 + ECD_02716 0.40 -1.9
2,857,155 + ECD_02716 0.40 -1.2
2,857,234 + ECD_02716 0.46 -1.7
2,857,234 + ECD_02716 0.46 +1.6
2,857,235 - ECD_02716 0.46 -1.1
2,857,235 - ECD_02716 0.46 +0.0
2,857,235 - ECD_02716 0.46 -0.0
2,857,235 - ECD_02716 0.46 -0.7
2,857,235 - ECD_02716 0.46 -0.4
2,857,235 - ECD_02716 0.46 +0.3
2,857,236 + ECD_02716 0.46 -0.2
2,857,237 - ECD_02716 0.46 -0.7
2,857,237 - ECD_02716 0.46 -0.1
2,857,331 + ECD_02716 0.53 -0.9
2,857,331 + ECD_02716 0.53 +0.1
2,857,410 + ECD_02716 0.59 +0.4
2,857,586 + ECD_02716 0.73 -1.7
2,857,586 + ECD_02716 0.73 -1.2
2,857,586 + ECD_02716 0.73 +0.0
2,857,656 + ECD_02716 0.78 +0.8
2,857,663 + ECD_02716 0.78 -0.8
2,857,663 + ECD_02716 0.78 -1.1
2,857,664 - ECD_02716 0.79 -0.3
2,857,672 + ECD_02716 0.79 +0.8
2,857,673 - ECD_02716 0.79 -0.1
2,857,696 - ECD_02716 0.81 +0.1
2,857,819 + +0.9
2,857,820 - +0.8
2,857,902 + +1.4
2,857,911 + +0.3
2,857,911 + +0.3
2,857,911 + -1.8
2,857,911 + +0.3
2,857,911 + +0.4
2,857,911 + -2.8
2,857,911 + -0.2
2,857,911 + -0.7
2,857,911 + -0.3
2,857,912 - +0.2
2,857,912 - -0.8
2,857,912 - -1.7
2,857,912 - -1.0
2,857,912 - +1.9
2,857,933 - +0.2
2,857,945 - -0.2
2,857,945 - -0.9
2,857,945 - -0.1
2,857,945 - +0.6
2,857,947 + -0.8
2,857,947 + -1.0
2,857,947 + -1.4
2,857,948 - +0.3
2,857,951 - +1.5
2,857,981 + -0.1
2,857,981 + -0.4
2,857,981 + +0.6
2,857,981 + +0.8
2,857,981 + +0.6
2,857,981 + -0.9
2,857,981 + +0.0
2,857,981 + -1.9
2,857,982 - -0.0
2,857,982 - -2.3
2,857,982 - +0.2
2,857,982 - +0.8
2,857,982 - -2.7
2,857,982 - +0.3
2,857,982 - +0.4
2,857,998 + +1.4
2,857,998 + -0.8
2,857,998 + -0.7
2,857,998 + -0.8
2,857,999 - -0.4
2,857,999 - -0.3
2,858,053 + -0.1
2,858,085 + -2.2
2,858,085 + +0.2
2,858,086 - +2.5
2,858,229 + ECD_02717 0.18 -2.8
2,858,315 - ECD_02717 0.24 +0.4
2,858,390 - ECD_02717 0.30 +0.6
2,858,390 - ECD_02717 0.30 +1.2
2,858,401 - ECD_02717 0.31 +0.7
2,858,401 - ECD_02717 0.31 -1.4
2,858,401 - ECD_02717 0.31 +3.2
2,858,401 - ECD_02717 0.31 -0.6
2,858,401 - ECD_02717 0.31 +0.4
2,858,405 - ECD_02717 0.31 -1.7
2,858,405 - ECD_02717 0.31 +0.3
2,858,431 + ECD_02717 0.33 +0.2
2,858,486 - ECD_02717 0.37 +1.5
2,858,630 - ECD_02717 0.47 +0.9
2,858,675 + ECD_02717 0.51 -2.3
2,858,675 + ECD_02717 0.51 -0.4
2,858,676 - ECD_02717 0.51 +1.1
2,858,719 + ECD_02717 0.54 -1.8
2,858,719 + ECD_02717 0.54 -0.3
2,858,720 - ECD_02717 0.54 +0.5
2,858,769 + ECD_02717 0.58 +0.3
2,858,770 - ECD_02717 0.58 +1.2
2,858,860 + ECD_02717 0.64 +0.1
2,858,910 + ECD_02717 0.68 -0.6
2,858,910 + ECD_02717 0.68 -2.6
2,858,910 + ECD_02717 0.68 +0.3

Or see this region's nucleotide sequence