Experiment: Bas24
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02638 and ECD_02639 are separated by 67 nucleotides ECD_02639 and ECD_02640 are separated by 111 nucleotides
ECD_02638: ECD_02638 - SecY-interacting protein, at 2,757,325 to 2,757,870
_02638
ECD_02639: ECD_02639 - 7-cyano-7-deazaguanine reductase (NADPH-dependent), at 2,757,938 to 2,758,786
_02639
ECD_02640: ECD_02640 - UPF0717 family protein, at 2,758,898 to 2,760,262
_02640
Position (kb)
2757
2758
2759 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2757.120 kb on + strand at 2757.121 kb on - strand at 2757.121 kb on - strand at 2757.121 kb on - strand at 2757.121 kb on - strand at 2757.121 kb on - strand at 2757.145 kb on + strand at 2757.254 kb on - strand at 2757.318 kb on - strand at 2757.339 kb on + strand at 2757.339 kb on + strand at 2757.387 kb on + strand, within ECD_02638 at 2757.388 kb on - strand, within ECD_02638 at 2757.388 kb on - strand, within ECD_02638 at 2757.430 kb on - strand, within ECD_02638 at 2757.430 kb on - strand, within ECD_02638 at 2757.430 kb on - strand, within ECD_02638 at 2757.449 kb on - strand, within ECD_02638 at 2757.449 kb on - strand, within ECD_02638 at 2757.449 kb on - strand, within ECD_02638 at 2757.472 kb on - strand, within ECD_02638 at 2757.476 kb on - strand, within ECD_02638 at 2757.476 kb on - strand, within ECD_02638 at 2757.476 kb on - strand, within ECD_02638 at 2757.476 kb on - strand, within ECD_02638 at 2757.476 kb on - strand, within ECD_02638 at 2757.627 kb on + strand, within ECD_02638 at 2757.627 kb on + strand, within ECD_02638 at 2757.628 kb on - strand, within ECD_02638 at 2757.628 kb on - strand, within ECD_02638 at 2757.628 kb on - strand, within ECD_02638 at 2757.629 kb on + strand, within ECD_02638 at 2757.630 kb on - strand, within ECD_02638 at 2757.630 kb on - strand, within ECD_02638 at 2757.630 kb on - strand, within ECD_02638 at 2757.637 kb on - strand, within ECD_02638 at 2757.652 kb on + strand, within ECD_02638 at 2757.652 kb on + strand, within ECD_02638 at 2757.686 kb on - strand, within ECD_02638 at 2757.723 kb on - strand, within ECD_02638 at 2757.725 kb on - strand, within ECD_02638 at 2757.725 kb on - strand, within ECD_02638 at 2757.747 kb on + strand, within ECD_02638 at 2757.748 kb on - strand, within ECD_02638 at 2757.770 kb on + strand, within ECD_02638 at 2757.798 kb on + strand, within ECD_02638 at 2757.798 kb on + strand, within ECD_02638 at 2757.799 kb on - strand, within ECD_02638 at 2757.871 kb on + strand at 2757.872 kb on - strand at 2757.872 kb on - strand at 2757.897 kb on + strand at 2757.897 kb on + strand at 2757.897 kb on + strand at 2757.897 kb on + strand at 2757.897 kb on + strand at 2757.898 kb on - strand at 2757.898 kb on - strand at 2757.898 kb on - strand at 2757.898 kb on - strand at 2757.898 kb on - strand at 2757.898 kb on - strand at 2757.911 kb on - strand at 2758.010 kb on + strand at 2758.011 kb on - strand at 2758.115 kb on + strand, within ECD_02639 at 2758.181 kb on + strand, within ECD_02639 at 2758.181 kb on + strand, within ECD_02639 at 2758.181 kb on + strand, within ECD_02639 at 2758.191 kb on + strand, within ECD_02639 at 2758.217 kb on - strand, within ECD_02639 at 2758.223 kb on + strand, within ECD_02639 at 2758.223 kb on + strand, within ECD_02639 at 2758.223 kb on + strand, within ECD_02639 at 2758.224 kb on - strand, within ECD_02639 at 2758.237 kb on + strand, within ECD_02639 at 2758.253 kb on - strand, within ECD_02639 at 2758.293 kb on + strand, within ECD_02639 at 2758.293 kb on + strand, within ECD_02639 at 2758.293 kb on + strand, within ECD_02639 at 2758.294 kb on - strand, within ECD_02639 at 2758.294 kb on - strand, within ECD_02639 at 2758.294 kb on - strand, within ECD_02639 at 2758.330 kb on - strand, within ECD_02639 at 2758.330 kb on - strand, within ECD_02639 at 2758.330 kb on - strand, within ECD_02639 at 2758.331 kb on + strand, within ECD_02639 at 2758.373 kb on - strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.415 kb on + strand, within ECD_02639 at 2758.416 kb on - strand, within ECD_02639 at 2758.416 kb on - strand, within ECD_02639 at 2758.416 kb on - strand, within ECD_02639 at 2758.416 kb on - strand, within ECD_02639 at 2758.416 kb on - strand, within ECD_02639 at 2758.433 kb on + strand, within ECD_02639 at 2758.433 kb on + strand, within ECD_02639 at 2758.464 kb on + strand, within ECD_02639 at 2758.465 kb on - strand, within ECD_02639 at 2758.648 kb on + strand, within ECD_02639 at 2758.648 kb on + strand, within ECD_02639 at 2758.649 kb on - strand, within ECD_02639 at 2758.660 kb on - strand, within ECD_02639 at 2758.701 kb on - strand, within ECD_02639 at 2758.702 kb on + strand at 2758.703 kb on - strand at 2758.726 kb on + strand at 2758.742 kb on - strand at 2758.855 kb on + strand at 2758.855 kb on + strand at 2758.855 kb on + strand at 2758.855 kb on + strand at 2758.856 kb on - strand at 2758.856 kb on - strand at 2758.856 kb on - strand at 2758.903 kb on + strand at 2758.903 kb on + strand at 2758.904 kb on - strand at 2758.904 kb on - strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.909 kb on + strand at 2758.910 kb on - strand at 2758.910 kb on - strand at 2758.910 kb on - strand at 2758.910 kb on - strand at 2758.910 kb on - strand at 2758.910 kb on - strand at 2758.910 kb on - strand at 2758.913 kb on - strand at 2758.933 kb on + strand at 2758.933 kb on + strand at 2758.933 kb on + strand at 2758.933 kb on + strand at 2758.933 kb on + strand at 2758.933 kb on + strand at 2758.933 kb on + strand at 2758.934 kb on - strand at 2758.934 kb on - strand at 2758.958 kb on - strand at 2758.963 kb on + strand at 2758.989 kb on - strand at 2759.032 kb on + strand at 2759.112 kb on + strand, within ECD_02640 at 2759.284 kb on + strand, within ECD_02640 at 2759.344 kb on + strand, within ECD_02640 at 2759.344 kb on + strand, within ECD_02640 at 2759.344 kb on + strand, within ECD_02640 at 2759.344 kb on + strand, within ECD_02640 at 2759.344 kb on + strand, within ECD_02640 at 2759.345 kb on - strand, within ECD_02640 at 2759.345 kb on - strand, within ECD_02640 at 2759.345 kb on - strand, within ECD_02640 at 2759.345 kb on - strand, within ECD_02640 at 2759.387 kb on + strand, within ECD_02640 at 2759.388 kb on - strand, within ECD_02640 at 2759.388 kb on - strand, within ECD_02640 at 2759.388 kb on - strand, within ECD_02640 at 2759.393 kb on + strand, within ECD_02640 at 2759.393 kb on + strand, within ECD_02640 at 2759.393 kb on + strand, within ECD_02640 at 2759.438 kb on - strand, within ECD_02640 at 2759.438 kb on - strand, within ECD_02640 at 2759.438 kb on - strand, within ECD_02640 at 2759.438 kb on - strand, within ECD_02640 at 2759.513 kb on + strand, within ECD_02640 at 2759.513 kb on + strand, within ECD_02640 at 2759.514 kb on - strand, within ECD_02640 at 2759.536 kb on + strand, within ECD_02640 at 2759.536 kb on + strand, within ECD_02640 at 2759.537 kb on - strand, within ECD_02640 at 2759.537 kb on - strand, within ECD_02640 at 2759.656 kb on + strand, within ECD_02640 at 2759.656 kb on + strand, within ECD_02640 at 2759.656 kb on + strand, within ECD_02640 at 2759.657 kb on - strand, within ECD_02640 at 2759.657 kb on - strand, within ECD_02640 at 2759.657 kb on - strand, within ECD_02640 at 2759.742 kb on + strand, within ECD_02640 at 2759.742 kb on + strand, within ECD_02640
Per-strain Table
Position Strand Gene LocusTag Fraction Bas24 remove 2,757,120 + -0.7 2,757,121 - -2.4 2,757,121 - +1.2 2,757,121 - -1.4 2,757,121 - -0.5 2,757,121 - -0.8 2,757,145 + +1.2 2,757,254 - -0.6 2,757,318 - -0.4 2,757,339 + -0.3 2,757,339 + +0.1 2,757,387 + ECD_02638 0.11 +1.4 2,757,388 - ECD_02638 0.12 +0.4 2,757,388 - ECD_02638 0.12 +0.6 2,757,430 - ECD_02638 0.19 +0.6 2,757,430 - ECD_02638 0.19 +0.5 2,757,430 - ECD_02638 0.19 -0.9 2,757,449 - ECD_02638 0.23 -0.3 2,757,449 - ECD_02638 0.23 -0.8 2,757,449 - ECD_02638 0.23 +0.3 2,757,472 - ECD_02638 0.27 +1.1 2,757,476 - ECD_02638 0.28 -1.0 2,757,476 - ECD_02638 0.28 +1.4 2,757,476 - ECD_02638 0.28 +0.7 2,757,476 - ECD_02638 0.28 -0.9 2,757,476 - ECD_02638 0.28 -0.1 2,757,627 + ECD_02638 0.55 +0.8 2,757,627 + ECD_02638 0.55 -0.5 2,757,628 - ECD_02638 0.55 -1.3 2,757,628 - ECD_02638 0.55 +0.2 2,757,628 - ECD_02638 0.55 -0.6 2,757,629 + ECD_02638 0.56 +0.8 2,757,630 - ECD_02638 0.56 -0.9 2,757,630 - ECD_02638 0.56 +0.5 2,757,630 - ECD_02638 0.56 -0.6 2,757,637 - ECD_02638 0.57 +1.1 2,757,652 + ECD_02638 0.60 +0.0 2,757,652 + ECD_02638 0.60 -1.6 2,757,686 - ECD_02638 0.66 +2.0 2,757,723 - ECD_02638 0.73 +0.1 2,757,725 - ECD_02638 0.73 -1.0 2,757,725 - ECD_02638 0.73 -0.9 2,757,747 + ECD_02638 0.77 +0.1 2,757,748 - ECD_02638 0.77 +0.4 2,757,770 + ECD_02638 0.82 +0.3 2,757,798 + ECD_02638 0.87 -1.4 2,757,798 + ECD_02638 0.87 +0.6 2,757,799 - ECD_02638 0.87 +1.6 2,757,871 + +0.1 2,757,872 - +0.6 2,757,872 - +0.9 2,757,897 + -0.3 2,757,897 + +0.1 2,757,897 + +0.1 2,757,897 + +0.7 2,757,897 + +0.1 2,757,898 - -0.8 2,757,898 - +0.4 2,757,898 - -1.1 2,757,898 - -0.4 2,757,898 - -1.2 2,757,898 - +0.3 2,757,911 - +0.4 2,758,010 + +0.9 2,758,011 - -2.5 2,758,115 + ECD_02639 0.21 +0.4 2,758,181 + ECD_02639 0.29 +1.2 2,758,181 + ECD_02639 0.29 +0.7 2,758,181 + ECD_02639 0.29 -0.6 2,758,191 + ECD_02639 0.30 -0.1 2,758,217 - ECD_02639 0.33 -1.1 2,758,223 + ECD_02639 0.34 +1.6 2,758,223 + ECD_02639 0.34 +1.2 2,758,223 + ECD_02639 0.34 +0.9 2,758,224 - ECD_02639 0.34 -0.3 2,758,237 + ECD_02639 0.35 -0.3 2,758,253 - ECD_02639 0.37 +0.3 2,758,293 + ECD_02639 0.42 +0.1 2,758,293 + ECD_02639 0.42 +0.3 2,758,293 + ECD_02639 0.42 +0.6 2,758,294 - ECD_02639 0.42 +1.1 2,758,294 - ECD_02639 0.42 -0.2 2,758,294 - ECD_02639 0.42 -0.7 2,758,330 - ECD_02639 0.46 +1.0 2,758,330 - ECD_02639 0.46 -0.9 2,758,330 - ECD_02639 0.46 -2.0 2,758,331 + ECD_02639 0.46 +0.3 2,758,373 - ECD_02639 0.51 +1.7 2,758,415 + ECD_02639 0.56 -0.3 2,758,415 + ECD_02639 0.56 -0.5 2,758,415 + ECD_02639 0.56 +1.8 2,758,415 + ECD_02639 0.56 -1.2 2,758,415 + ECD_02639 0.56 +0.7 2,758,415 + ECD_02639 0.56 -0.6 2,758,415 + ECD_02639 0.56 +0.0 2,758,415 + ECD_02639 0.56 -0.2 2,758,416 - ECD_02639 0.56 +0.2 2,758,416 - ECD_02639 0.56 +2.5 2,758,416 - ECD_02639 0.56 +0.8 2,758,416 - ECD_02639 0.56 +0.8 2,758,416 - ECD_02639 0.56 +0.0 2,758,433 + ECD_02639 0.58 +0.3 2,758,433 + ECD_02639 0.58 +0.5 2,758,464 + ECD_02639 0.62 +1.4 2,758,465 - ECD_02639 0.62 +0.7 2,758,648 + ECD_02639 0.84 -0.6 2,758,648 + ECD_02639 0.84 -1.4 2,758,649 - ECD_02639 0.84 -0.3 2,758,660 - ECD_02639 0.85 +1.4 2,758,701 - ECD_02639 0.90 +0.1 2,758,702 + -1.4 2,758,703 - +1.7 2,758,726 + -0.5 2,758,742 - -1.9 2,758,855 + -0.3 2,758,855 + +0.9 2,758,855 + -1.0 2,758,855 + -1.2 2,758,856 - -0.3 2,758,856 - +0.1 2,758,856 - +0.7 2,758,903 + +1.2 2,758,903 + -1.2 2,758,904 - -0.4 2,758,904 - -1.0 2,758,909 + +0.3 2,758,909 + +0.3 2,758,909 + +1.1 2,758,909 + -0.6 2,758,909 + -1.0 2,758,909 + +0.3 2,758,909 + -1.0 2,758,909 + +0.1 2,758,909 + -0.3 2,758,909 + -1.0 2,758,909 + +0.2 2,758,910 - +0.1 2,758,910 - -0.5 2,758,910 - -0.8 2,758,910 - -0.6 2,758,910 - +0.4 2,758,910 - +0.4 2,758,910 - +0.2 2,758,913 - +0.6 2,758,933 + -2.8 2,758,933 + -0.9 2,758,933 + -0.2 2,758,933 + -0.5 2,758,933 + +1.3 2,758,933 + +0.1 2,758,933 + +0.2 2,758,934 - +0.4 2,758,934 - -0.9 2,758,958 - +0.1 2,758,963 + +0.5 2,758,989 - +0.0 2,759,032 + +0.5 2,759,112 + ECD_02640 0.16 +0.5 2,759,284 + ECD_02640 0.28 +0.4 2,759,344 + ECD_02640 0.33 +1.4 2,759,344 + ECD_02640 0.33 -0.0 2,759,344 + ECD_02640 0.33 +1.7 2,759,344 + ECD_02640 0.33 +0.9 2,759,344 + ECD_02640 0.33 -0.1 2,759,345 - ECD_02640 0.33 -2.1 2,759,345 - ECD_02640 0.33 +0.3 2,759,345 - ECD_02640 0.33 +0.3 2,759,345 - ECD_02640 0.33 +0.7 2,759,387 + ECD_02640 0.36 +0.4 2,759,388 - ECD_02640 0.36 -2.6 2,759,388 - ECD_02640 0.36 -1.7 2,759,388 - ECD_02640 0.36 -0.1 2,759,393 + ECD_02640 0.36 -1.3 2,759,393 + ECD_02640 0.36 -0.7 2,759,393 + ECD_02640 0.36 +0.8 2,759,438 - ECD_02640 0.40 -0.6 2,759,438 - ECD_02640 0.40 -0.4 2,759,438 - ECD_02640 0.40 +0.3 2,759,438 - ECD_02640 0.40 +0.2 2,759,513 + ECD_02640 0.45 +0.7 2,759,513 + ECD_02640 0.45 -0.7 2,759,514 - ECD_02640 0.45 +0.9 2,759,536 + ECD_02640 0.47 +0.3 2,759,536 + ECD_02640 0.47 +0.7 2,759,537 - ECD_02640 0.47 +0.1 2,759,537 - ECD_02640 0.47 -0.0 2,759,656 + ECD_02640 0.56 -2.3 2,759,656 + ECD_02640 0.56 +0.7 2,759,656 + ECD_02640 0.56 -1.0 2,759,657 - ECD_02640 0.56 +0.4 2,759,657 - ECD_02640 0.56 -1.3 2,759,657 - ECD_02640 0.56 +0.3 2,759,742 + ECD_02640 0.62 +0.0 2,759,742 + ECD_02640 0.62 +0.7
Or see this region's nucleotide sequence