Experiment: Bas24
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02583 and ECD_02584 are separated by 105 nucleotides ECD_02584 and ECD_02585 are separated by 50 nucleotides ECD_02585 and ECD_02586 are separated by 195 nucleotides
ECD_02583: ECD_02583 - methyl-directed mismatch repair protein, at 2,697,060 to 2,699,621
_02583
ECD_02584: ECD_02584 - serine/threonine-specific protein phosphatase 2, at 2,699,727 to 2,700,383
_02584
ECD_02585: ECD_02585 - DeoR family putative transcriptional regulator, at 2,700,434 to 2,701,201
_02585
ECD_02586: ECD_02586 - putative dehydrogenase, at 2,701,397 to 2,702,305
_02586
Position (kb)
2700
2701
2702 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2699.619 kb on + strand at 2699.656 kb on - strand at 2699.775 kb on - strand at 2699.777 kb on - strand at 2699.860 kb on + strand, within ECD_02584 at 2699.861 kb on - strand, within ECD_02584 at 2700.067 kb on + strand, within ECD_02584 at 2700.514 kb on + strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.570 kb on + strand, within ECD_02585 at 2700.641 kb on - strand, within ECD_02585 at 2700.692 kb on - strand, within ECD_02585 at 2700.800 kb on - strand, within ECD_02585 at 2700.800 kb on - strand, within ECD_02585 at 2700.817 kb on - strand, within ECD_02585 at 2700.817 kb on - strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.916 kb on + strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2701.102 kb on + strand, within ECD_02585 at 2701.102 kb on + strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.138 kb on + strand at 2701.139 kb on - strand at 2701.161 kb on - strand at 2701.161 kb on - strand at 2701.161 kb on - strand at 2701.234 kb on + strand at 2701.234 kb on + strand at 2701.234 kb on + strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.239 kb on + strand at 2701.240 kb on - strand at 2701.269 kb on + strand at 2701.277 kb on - strand at 2701.277 kb on - strand at 2701.277 kb on - strand at 2701.286 kb on - strand at 2701.347 kb on + strand at 2701.437 kb on + strand at 2701.437 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.469 kb on + strand at 2701.489 kb on + strand, within ECD_02586 at 2701.489 kb on + strand, within ECD_02586 at 2701.490 kb on - strand, within ECD_02586 at 2701.525 kb on + strand, within ECD_02586 at 2701.627 kb on + strand, within ECD_02586 at 2701.791 kb on + strand, within ECD_02586 at 2701.897 kb on - strand, within ECD_02586 at 2701.897 kb on - strand, within ECD_02586 at 2701.914 kb on + strand, within ECD_02586 at 2701.915 kb on - strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.956 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.960 kb on + strand, within ECD_02586 at 2701.961 kb on - strand, within ECD_02586 at 2701.961 kb on - strand, within ECD_02586 at 2701.961 kb on - strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.024 kb on + strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.025 kb on - strand, within ECD_02586 at 2702.155 kb on + strand, within ECD_02586
Per-strain Table
Position Strand Gene LocusTag Fraction Bas24 remove 2,699,619 + +0.7 2,699,656 - +0.3 2,699,775 - +1.4 2,699,777 - -2.6 2,699,860 + ECD_02584 0.20 -1.1 2,699,861 - ECD_02584 0.20 -0.9 2,700,067 + ECD_02584 0.52 +0.1 2,700,514 + ECD_02585 0.10 +2.0 2,700,518 - ECD_02585 0.11 +1.3 2,700,518 - ECD_02585 0.11 +1.3 2,700,518 - ECD_02585 0.11 +1.0 2,700,570 + ECD_02585 0.18 +0.1 2,700,641 - ECD_02585 0.27 +0.5 2,700,692 - ECD_02585 0.34 +1.6 2,700,800 - ECD_02585 0.48 -0.1 2,700,800 - ECD_02585 0.48 +1.4 2,700,817 - ECD_02585 0.50 -0.3 2,700,817 - ECD_02585 0.50 +1.0 2,700,912 + ECD_02585 0.62 +1.9 2,700,912 + ECD_02585 0.62 +1.8 2,700,912 + ECD_02585 0.62 +0.2 2,700,913 - ECD_02585 0.62 +1.5 2,700,913 - ECD_02585 0.62 +2.3 2,700,913 - ECD_02585 0.62 +0.0 2,700,916 + ECD_02585 0.63 +0.6 2,700,917 - ECD_02585 0.63 +0.4 2,700,917 - ECD_02585 0.63 -1.3 2,700,917 - ECD_02585 0.63 +0.1 2,700,917 - ECD_02585 0.63 +0.6 2,700,917 - ECD_02585 0.63 +0.6 2,700,917 - ECD_02585 0.63 +3.0 2,701,102 + ECD_02585 0.87 -0.4 2,701,102 + ECD_02585 0.87 +0.9 2,701,103 - ECD_02585 0.87 -0.2 2,701,103 - ECD_02585 0.87 +0.5 2,701,103 - ECD_02585 0.87 +0.2 2,701,103 - ECD_02585 0.87 +0.3 2,701,103 - ECD_02585 0.87 +0.8 2,701,103 - ECD_02585 0.87 +0.4 2,701,103 - ECD_02585 0.87 +1.5 2,701,103 - ECD_02585 0.87 +0.2 2,701,103 - ECD_02585 0.87 +0.6 2,701,103 - ECD_02585 0.87 +0.5 2,701,138 + +1.3 2,701,139 - +2.1 2,701,161 - -0.4 2,701,161 - +0.3 2,701,161 - -0.7 2,701,234 + +2.6 2,701,234 + +1.4 2,701,234 + +1.0 2,701,235 - -0.5 2,701,235 - -3.0 2,701,235 - -0.6 2,701,235 - -0.9 2,701,239 + +1.8 2,701,240 - +0.1 2,701,269 + +0.6 2,701,277 - -0.6 2,701,277 - +0.4 2,701,277 - -0.8 2,701,286 - -0.1 2,701,347 + -0.7 2,701,437 + -0.2 2,701,437 + +0.8 2,701,469 + -0.4 2,701,469 + -0.0 2,701,469 + +1.1 2,701,469 + -0.5 2,701,469 + +0.7 2,701,469 + +0.7 2,701,469 + +0.4 2,701,489 + ECD_02586 0.10 -0.4 2,701,489 + ECD_02586 0.10 +0.1 2,701,490 - ECD_02586 0.10 +0.3 2,701,525 + ECD_02586 0.14 +1.2 2,701,627 + ECD_02586 0.25 -1.1 2,701,791 + ECD_02586 0.43 -0.7 2,701,897 - ECD_02586 0.55 -0.2 2,701,897 - ECD_02586 0.55 +1.4 2,701,914 + ECD_02586 0.57 -0.0 2,701,915 - ECD_02586 0.57 +0.6 2,701,956 + ECD_02586 0.61 +0.7 2,701,956 + ECD_02586 0.61 -1.4 2,701,956 + ECD_02586 0.61 -0.4 2,701,956 + ECD_02586 0.61 -0.1 2,701,960 + ECD_02586 0.62 +0.2 2,701,960 + ECD_02586 0.62 -0.5 2,701,960 + ECD_02586 0.62 -0.1 2,701,960 + ECD_02586 0.62 +0.0 2,701,960 + ECD_02586 0.62 +0.8 2,701,960 + ECD_02586 0.62 +0.6 2,701,960 + ECD_02586 0.62 -0.3 2,701,960 + ECD_02586 0.62 +0.4 2,701,960 + ECD_02586 0.62 +0.4 2,701,960 + ECD_02586 0.62 -0.9 2,701,960 + ECD_02586 0.62 +0.4 2,701,961 - ECD_02586 0.62 +0.3 2,701,961 - ECD_02586 0.62 -0.3 2,701,961 - ECD_02586 0.62 -0.2 2,702,024 + ECD_02586 0.69 +0.3 2,702,024 + ECD_02586 0.69 +0.2 2,702,024 + ECD_02586 0.69 -0.8 2,702,024 + ECD_02586 0.69 -0.8 2,702,024 + ECD_02586 0.69 +0.4 2,702,024 + ECD_02586 0.69 +0.6 2,702,024 + ECD_02586 0.69 +0.7 2,702,024 + ECD_02586 0.69 +0.2 2,702,024 + ECD_02586 0.69 -0.2 2,702,024 + ECD_02586 0.69 +0.2 2,702,024 + ECD_02586 0.69 +0.8 2,702,024 + ECD_02586 0.69 -1.3 2,702,024 + ECD_02586 0.69 -1.2 2,702,024 + ECD_02586 0.69 +0.6 2,702,024 + ECD_02586 0.69 -0.0 2,702,025 - ECD_02586 0.69 +1.5 2,702,025 - ECD_02586 0.69 -0.9 2,702,025 - ECD_02586 0.69 +0.5 2,702,025 - ECD_02586 0.69 -0.4 2,702,155 + ECD_02586 0.83 +1.6
Or see this region's nucleotide sequence