Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04254 and ECD_04255 are separated by 419 nucleotides ECD_04255 and ECD_04256 overlap by 29 nucleotides
ECD_04254: ECD_04254 - putative DNase, at 4,531,856 to 4,532,635
_04254
ECD_04255: ECD_04255 - putative pyruvate formate lyase activating enzyme, at 4,533,055 to 4,533,918
_04255
ECD_04256: ECD_04256 - DUF3029 family protein, putative glycine radical enzyme, at 4,533,890 to 4,535,440
_04256
Position (kb)
4533
4534 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4532.060 kb on - strand, within ECD_04254 at 4532.060 kb on - strand, within ECD_04254 at 4532.074 kb on + strand, within ECD_04254 at 4532.097 kb on + strand, within ECD_04254 at 4532.098 kb on - strand, within ECD_04254 at 4532.098 kb on - strand, within ECD_04254 at 4532.290 kb on + strand, within ECD_04254 at 4532.290 kb on + strand, within ECD_04254 at 4532.291 kb on - strand, within ECD_04254 at 4532.305 kb on - strand, within ECD_04254 at 4532.364 kb on + strand, within ECD_04254 at 4532.364 kb on + strand, within ECD_04254 at 4532.365 kb on - strand, within ECD_04254 at 4532.365 kb on - strand, within ECD_04254 at 4532.398 kb on + strand, within ECD_04254 at 4532.398 kb on + strand, within ECD_04254 at 4532.399 kb on - strand, within ECD_04254 at 4532.399 kb on - strand, within ECD_04254 at 4532.399 kb on - strand, within ECD_04254 at 4532.419 kb on + strand, within ECD_04254 at 4532.603 kb on - strand at 4532.606 kb on - strand at 4532.612 kb on + strand at 4532.612 kb on + strand at 4532.612 kb on + strand at 4532.612 kb on + strand at 4532.612 kb on + strand at 4532.613 kb on - strand at 4532.613 kb on - strand at 4532.614 kb on + strand at 4532.614 kb on + strand at 4532.614 kb on + strand at 4532.614 kb on + strand at 4532.614 kb on + strand at 4532.614 kb on + strand at 4532.614 kb on + strand at 4532.615 kb on - strand at 4532.615 kb on - strand at 4532.706 kb on - strand at 4532.735 kb on - strand at 4532.807 kb on - strand at 4532.879 kb on - strand at 4533.017 kb on + strand at 4533.038 kb on - strand at 4533.062 kb on + strand at 4533.076 kb on + strand at 4533.167 kb on + strand, within ECD_04255 at 4533.168 kb on - strand, within ECD_04255 at 4533.323 kb on + strand, within ECD_04255 at 4533.324 kb on - strand, within ECD_04255 at 4533.517 kb on - strand, within ECD_04255 at 4533.517 kb on - strand, within ECD_04255 at 4533.891 kb on + strand at 4533.923 kb on + strand at 4533.950 kb on - strand at 4534.042 kb on + strand at 4534.043 kb on - strand at 4534.043 kb on - strand at 4534.045 kb on - strand, within ECD_04256 at 4534.131 kb on - strand, within ECD_04256 at 4534.197 kb on + strand, within ECD_04256 at 4534.198 kb on - strand, within ECD_04256 at 4534.200 kb on + strand, within ECD_04256 at 4534.200 kb on + strand, within ECD_04256 at 4534.201 kb on - strand, within ECD_04256 at 4534.341 kb on + strand, within ECD_04256 at 4534.398 kb on - strand, within ECD_04256 at 4534.425 kb on + strand, within ECD_04256 at 4534.482 kb on + strand, within ECD_04256 at 4534.482 kb on + strand, within ECD_04256 at 4534.482 kb on + strand, within ECD_04256 at 4534.482 kb on + strand, within ECD_04256 at 4534.483 kb on - strand, within ECD_04256 at 4534.483 kb on - strand, within ECD_04256 at 4534.483 kb on - strand, within ECD_04256 at 4534.483 kb on - strand, within ECD_04256 at 4534.543 kb on + strand, within ECD_04256 at 4534.544 kb on - strand, within ECD_04256 at 4534.625 kb on + strand, within ECD_04256 at 4534.731 kb on + strand, within ECD_04256
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 4,532,060 - ECD_04254 0.26 +0.7 4,532,060 - ECD_04254 0.26 -0.6 4,532,074 + ECD_04254 0.28 -0.5 4,532,097 + ECD_04254 0.31 +0.4 4,532,098 - ECD_04254 0.31 -0.7 4,532,098 - ECD_04254 0.31 -0.4 4,532,290 + ECD_04254 0.56 +0.2 4,532,290 + ECD_04254 0.56 -0.9 4,532,291 - ECD_04254 0.56 -1.4 4,532,305 - ECD_04254 0.58 -0.2 4,532,364 + ECD_04254 0.65 +0.1 4,532,364 + ECD_04254 0.65 +0.0 4,532,365 - ECD_04254 0.65 +0.9 4,532,365 - ECD_04254 0.65 +0.1 4,532,398 + ECD_04254 0.69 -0.3 4,532,398 + ECD_04254 0.69 +1.3 4,532,399 - ECD_04254 0.70 -1.1 4,532,399 - ECD_04254 0.70 +1.5 4,532,399 - ECD_04254 0.70 -1.4 4,532,419 + ECD_04254 0.72 -0.6 4,532,603 - +2.1 4,532,606 - -2.5 4,532,612 + +0.4 4,532,612 + -0.1 4,532,612 + +0.3 4,532,612 + -0.2 4,532,612 + -0.3 4,532,613 - -0.6 4,532,613 - -0.0 4,532,614 + -0.7 4,532,614 + -1.4 4,532,614 + -0.2 4,532,614 + -1.5 4,532,614 + -0.9 4,532,614 + -0.3 4,532,614 + -0.3 4,532,615 - -0.4 4,532,615 - +0.3 4,532,706 - -1.4 4,532,735 - -0.8 4,532,807 - +1.1 4,532,879 - +0.2 4,533,017 + -0.1 4,533,038 - -0.6 4,533,062 + -0.3 4,533,076 + +0.6 4,533,167 + ECD_04255 0.13 +1.3 4,533,168 - ECD_04255 0.13 -0.1 4,533,323 + ECD_04255 0.31 +0.1 4,533,324 - ECD_04255 0.31 +0.8 4,533,517 - ECD_04255 0.53 +0.4 4,533,517 - ECD_04255 0.53 -1.4 4,533,891 + -0.3 4,533,923 + +0.2 4,533,950 - +2.0 4,534,042 + +0.3 4,534,043 - +0.4 4,534,043 - +1.8 4,534,045 - ECD_04256 0.10 -1.3 4,534,131 - ECD_04256 0.16 -0.3 4,534,197 + ECD_04256 0.20 -0.7 4,534,198 - ECD_04256 0.20 -1.5 4,534,200 + ECD_04256 0.20 -1.2 4,534,200 + ECD_04256 0.20 -0.2 4,534,201 - ECD_04256 0.20 -0.9 4,534,341 + ECD_04256 0.29 +0.6 4,534,398 - ECD_04256 0.33 +0.7 4,534,425 + ECD_04256 0.34 +0.4 4,534,482 + ECD_04256 0.38 -0.2 4,534,482 + ECD_04256 0.38 +1.6 4,534,482 + ECD_04256 0.38 -0.3 4,534,482 + ECD_04256 0.38 +0.6 4,534,483 - ECD_04256 0.38 -0.1 4,534,483 - ECD_04256 0.38 -1.1 4,534,483 - ECD_04256 0.38 +1.2 4,534,483 - ECD_04256 0.38 -0.2 4,534,543 + ECD_04256 0.42 -1.0 4,534,544 - ECD_04256 0.42 -1.1 4,534,625 + ECD_04256 0.47 +0.1 4,534,731 + ECD_04256 0.54 -0.4
Or see this region's nucleotide sequence