Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03808 and ECD_03809 are separated by 4 nucleotides ECD_03809 and ECD_03810 are separated by 96 nucleotides ECD_03810 and ECD_03811 are separated by 134 nucleotides
ECD_03808: ECD_03808 - stress-induced protein, at 4,021,215 to 4,021,643
_03808
ECD_03809: ECD_03809 - ferredoxin-NADP reductase; flavodoxin reductase, at 4,021,648 to 4,022,394
_03809
ECD_03810: ECD_03810 - fructose 1,6-bisphosphatase II, at 4,022,491 to 4,023,501
_03810
ECD_03811: ECD_03811 - glycerol kinase, at 4,023,636 to 4,025,144
_03811
Position (kb)
4022
4023
4024 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4021.560 kb on - strand, within ECD_03808 at 4021.598 kb on + strand, within ECD_03808 at 4021.598 kb on + strand, within ECD_03808 at 4021.598 kb on + strand, within ECD_03808 at 4021.637 kb on + strand at 4021.642 kb on - strand at 4021.656 kb on - strand at 4021.691 kb on - strand at 4021.734 kb on + strand, within ECD_03809 at 4021.734 kb on + strand, within ECD_03809 at 4021.785 kb on + strand, within ECD_03809 at 4021.943 kb on + strand, within ECD_03809 at 4021.948 kb on + strand, within ECD_03809 at 4021.948 kb on + strand, within ECD_03809 at 4021.949 kb on - strand, within ECD_03809 at 4021.949 kb on - strand, within ECD_03809 at 4021.949 kb on - strand, within ECD_03809 at 4021.962 kb on - strand, within ECD_03809 at 4022.002 kb on + strand, within ECD_03809 at 4022.014 kb on + strand, within ECD_03809 at 4022.015 kb on - strand, within ECD_03809 at 4022.033 kb on + strand, within ECD_03809 at 4022.034 kb on - strand, within ECD_03809 at 4022.034 kb on - strand, within ECD_03809 at 4022.050 kb on - strand, within ECD_03809 at 4022.069 kb on - strand, within ECD_03809 at 4022.069 kb on - strand, within ECD_03809 at 4022.087 kb on - strand, within ECD_03809 at 4022.122 kb on - strand, within ECD_03809 at 4022.171 kb on - strand, within ECD_03809 at 4022.171 kb on - strand, within ECD_03809 at 4022.230 kb on - strand, within ECD_03809 at 4022.230 kb on - strand, within ECD_03809 at 4022.230 kb on - strand, within ECD_03809 at 4022.234 kb on + strand, within ECD_03809 at 4022.234 kb on + strand, within ECD_03809 at 4022.235 kb on - strand, within ECD_03809 at 4022.235 kb on - strand, within ECD_03809 at 4022.235 kb on - strand, within ECD_03809 at 4022.240 kb on + strand, within ECD_03809 at 4022.240 kb on + strand, within ECD_03809 at 4022.335 kb on - strand at 4022.364 kb on + strand at 4022.424 kb on + strand at 4022.425 kb on - strand at 4022.534 kb on + strand at 4022.534 kb on + strand at 4022.534 kb on + strand at 4022.534 kb on + strand at 4022.646 kb on + strand, within ECD_03810 at 4022.704 kb on + strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.770 kb on - strand, within ECD_03810 at 4022.830 kb on + strand, within ECD_03810 at 4022.830 kb on + strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.886 kb on - strand, within ECD_03810 at 4022.913 kb on + strand, within ECD_03810 at 4022.953 kb on - strand, within ECD_03810 at 4022.959 kb on + strand, within ECD_03810 at 4022.960 kb on - strand, within ECD_03810 at 4022.965 kb on + strand, within ECD_03810 at 4023.012 kb on + strand, within ECD_03810 at 4023.144 kb on + strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.150 kb on + strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.258 kb on + strand, within ECD_03810 at 4023.258 kb on + strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.263 kb on - strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.502 kb on - strand at 4023.511 kb on + strand at 4023.537 kb on + strand at 4023.538 kb on - strand at 4023.538 kb on - strand at 4023.612 kb on + strand at 4023.632 kb on + strand at 4023.632 kb on + strand at 4023.633 kb on - strand at 4023.700 kb on + strand at 4023.704 kb on + strand at 4023.704 kb on + strand at 4023.704 kb on + strand at 4023.903 kb on + strand, within ECD_03811 at 4023.904 kb on - strand, within ECD_03811 at 4023.904 kb on - strand, within ECD_03811 at 4023.904 kb on - strand, within ECD_03811 at 4023.986 kb on - strand, within ECD_03811 at 4023.986 kb on - strand, within ECD_03811 at 4024.011 kb on + strand, within ECD_03811 at 4024.012 kb on - strand, within ECD_03811 at 4024.013 kb on + strand, within ECD_03811 at 4024.014 kb on - strand, within ECD_03811 at 4024.097 kb on + strand, within ECD_03811 at 4024.097 kb on + strand, within ECD_03811 at 4024.098 kb on - strand, within ECD_03811 at 4024.114 kb on + strand, within ECD_03811 at 4024.114 kb on + strand, within ECD_03811 at 4024.114 kb on + strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.243 kb on + strand, within ECD_03811 at 4024.243 kb on + strand, within ECD_03811 at 4024.244 kb on - strand, within ECD_03811 at 4024.348 kb on + strand, within ECD_03811 at 4024.349 kb on - strand, within ECD_03811 at 4024.349 kb on - strand, within ECD_03811 at 4024.460 kb on + strand, within ECD_03811 at 4024.461 kb on - strand, within ECD_03811 at 4024.471 kb on + strand, within ECD_03811 at 4024.471 kb on + strand, within ECD_03811 at 4024.472 kb on - strand, within ECD_03811 at 4024.472 kb on - strand, within ECD_03811 at 4024.473 kb on + strand, within ECD_03811 at 4024.474 kb on - strand, within ECD_03811 at 4024.474 kb on - strand, within ECD_03811
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 4,021,560 - ECD_03808 0.80 +0.8 4,021,598 + ECD_03808 0.89 -0.7 4,021,598 + ECD_03808 0.89 +0.0 4,021,598 + ECD_03808 0.89 +0.7 4,021,637 + -0.0 4,021,642 - +0.4 4,021,656 - -0.4 4,021,691 - -1.4 4,021,734 + ECD_03809 0.12 +0.0 4,021,734 + ECD_03809 0.12 +0.2 4,021,785 + ECD_03809 0.18 -1.0 4,021,943 + ECD_03809 0.39 +0.7 4,021,948 + ECD_03809 0.40 +0.4 4,021,948 + ECD_03809 0.40 -0.5 4,021,949 - ECD_03809 0.40 -0.7 4,021,949 - ECD_03809 0.40 +0.3 4,021,949 - ECD_03809 0.40 +0.7 4,021,962 - ECD_03809 0.42 -1.3 4,022,002 + ECD_03809 0.47 +0.0 4,022,014 + ECD_03809 0.49 +1.4 4,022,015 - ECD_03809 0.49 +1.1 4,022,033 + ECD_03809 0.52 -0.1 4,022,034 - ECD_03809 0.52 -0.2 4,022,034 - ECD_03809 0.52 +0.0 4,022,050 - ECD_03809 0.54 +0.4 4,022,069 - ECD_03809 0.56 -0.1 4,022,069 - ECD_03809 0.56 -0.8 4,022,087 - ECD_03809 0.59 -1.6 4,022,122 - ECD_03809 0.63 -1.1 4,022,171 - ECD_03809 0.70 +0.2 4,022,171 - ECD_03809 0.70 +1.4 4,022,230 - ECD_03809 0.78 +0.8 4,022,230 - ECD_03809 0.78 -2.2 4,022,230 - ECD_03809 0.78 -0.5 4,022,234 + ECD_03809 0.78 -0.1 4,022,234 + ECD_03809 0.78 +0.9 4,022,235 - ECD_03809 0.79 +0.9 4,022,235 - ECD_03809 0.79 +1.0 4,022,235 - ECD_03809 0.79 -2.4 4,022,240 + ECD_03809 0.79 -0.6 4,022,240 + ECD_03809 0.79 +2.4 4,022,335 - -0.2 4,022,364 + -0.3 4,022,424 + +0.9 4,022,425 - +0.1 4,022,534 + +0.8 4,022,534 + -1.2 4,022,534 + -0.4 4,022,534 + +0.2 4,022,646 + ECD_03810 0.15 +0.7 4,022,704 + ECD_03810 0.21 -0.3 4,022,705 - ECD_03810 0.21 +0.6 4,022,705 - ECD_03810 0.21 -1.5 4,022,705 - ECD_03810 0.21 +0.7 4,022,770 - ECD_03810 0.28 -0.2 4,022,830 + ECD_03810 0.34 +0.8 4,022,830 + ECD_03810 0.34 +0.8 4,022,831 - ECD_03810 0.34 +0.8 4,022,831 - ECD_03810 0.34 +0.6 4,022,831 - ECD_03810 0.34 +0.9 4,022,831 - ECD_03810 0.34 -0.4 4,022,831 - ECD_03810 0.34 +0.1 4,022,886 - ECD_03810 0.39 +0.5 4,022,913 + ECD_03810 0.42 +0.1 4,022,953 - ECD_03810 0.46 -0.9 4,022,959 + ECD_03810 0.46 +0.5 4,022,960 - ECD_03810 0.46 -0.1 4,022,965 + ECD_03810 0.47 -1.4 4,023,012 + ECD_03810 0.52 +1.2 4,023,144 + ECD_03810 0.65 +0.1 4,023,145 - ECD_03810 0.65 -0.1 4,023,145 - ECD_03810 0.65 +0.8 4,023,145 - ECD_03810 0.65 +0.6 4,023,146 + ECD_03810 0.65 -0.2 4,023,146 + ECD_03810 0.65 -0.0 4,023,146 + ECD_03810 0.65 -1.1 4,023,146 + ECD_03810 0.65 -1.5 4,023,146 + ECD_03810 0.65 -1.1 4,023,146 + ECD_03810 0.65 +0.7 4,023,146 + ECD_03810 0.65 +0.1 4,023,146 + ECD_03810 0.65 +0.6 4,023,146 + ECD_03810 0.65 +0.2 4,023,146 + ECD_03810 0.65 -2.3 4,023,146 + ECD_03810 0.65 +0.2 4,023,146 + ECD_03810 0.65 +0.8 4,023,146 + ECD_03810 0.65 +0.1 4,023,146 + ECD_03810 0.65 +1.4 4,023,146 + ECD_03810 0.65 +0.5 4,023,146 + ECD_03810 0.65 +1.3 4,023,146 + ECD_03810 0.65 -1.2 4,023,146 + ECD_03810 0.65 -0.9 4,023,147 - ECD_03810 0.65 +0.7 4,023,147 - ECD_03810 0.65 +0.2 4,023,147 - ECD_03810 0.65 +1.4 4,023,147 - ECD_03810 0.65 +0.4 4,023,147 - ECD_03810 0.65 +0.8 4,023,147 - ECD_03810 0.65 +1.0 4,023,147 - ECD_03810 0.65 -0.1 4,023,147 - ECD_03810 0.65 +0.7 4,023,147 - ECD_03810 0.65 -0.7 4,023,147 - ECD_03810 0.65 -0.2 4,023,147 - ECD_03810 0.65 +0.9 4,023,147 - ECD_03810 0.65 +0.3 4,023,147 - ECD_03810 0.65 +0.2 4,023,147 - ECD_03810 0.65 -0.7 4,023,147 - ECD_03810 0.65 -0.3 4,023,147 - ECD_03810 0.65 +1.5 4,023,147 - ECD_03810 0.65 +0.1 4,023,147 - ECD_03810 0.65 -0.1 4,023,147 - ECD_03810 0.65 +0.7 4,023,147 - ECD_03810 0.65 +0.1 4,023,147 - ECD_03810 0.65 +0.3 4,023,150 + ECD_03810 0.65 -0.1 4,023,151 - ECD_03810 0.65 +0.1 4,023,151 - ECD_03810 0.65 +0.7 4,023,151 - ECD_03810 0.65 -0.3 4,023,151 - ECD_03810 0.65 -0.3 4,023,258 + ECD_03810 0.76 -1.4 4,023,258 + ECD_03810 0.76 -0.2 4,023,259 - ECD_03810 0.76 -0.6 4,023,259 - ECD_03810 0.76 +1.7 4,023,259 - ECD_03810 0.76 -0.4 4,023,259 - ECD_03810 0.76 -0.6 4,023,263 - ECD_03810 0.76 +0.6 4,023,302 + ECD_03810 0.80 +0.8 4,023,302 + ECD_03810 0.80 +0.7 4,023,302 + ECD_03810 0.80 +0.5 4,023,302 + ECD_03810 0.80 +1.9 4,023,302 + ECD_03810 0.80 -0.2 4,023,303 - ECD_03810 0.80 +0.5 4,023,303 - ECD_03810 0.80 +0.6 4,023,303 - ECD_03810 0.80 +0.0 4,023,303 - ECD_03810 0.80 +0.3 4,023,303 - ECD_03810 0.80 +0.1 4,023,378 + ECD_03810 0.88 +0.4 4,023,378 + ECD_03810 0.88 -1.5 4,023,378 + ECD_03810 0.88 -0.2 4,023,378 + ECD_03810 0.88 +0.0 4,023,378 + ECD_03810 0.88 +0.1 4,023,378 + ECD_03810 0.88 +1.0 4,023,378 + ECD_03810 0.88 +2.0 4,023,379 - ECD_03810 0.88 -0.2 4,023,379 - ECD_03810 0.88 +0.4 4,023,379 - ECD_03810 0.88 +0.1 4,023,379 - ECD_03810 0.88 +0.0 4,023,502 - -0.2 4,023,511 + -0.6 4,023,537 + -0.2 4,023,538 - +0.6 4,023,538 - +1.0 4,023,612 + +1.6 4,023,632 + +0.2 4,023,632 + +3.2 4,023,633 - +0.7 4,023,700 + -1.8 4,023,704 + -0.3 4,023,704 + +1.6 4,023,704 + +1.2 4,023,903 + ECD_03811 0.18 +1.5 4,023,904 - ECD_03811 0.18 +0.7 4,023,904 - ECD_03811 0.18 +0.7 4,023,904 - ECD_03811 0.18 +1.9 4,023,986 - ECD_03811 0.23 +1.2 4,023,986 - ECD_03811 0.23 +0.0 4,024,011 + ECD_03811 0.25 +1.9 4,024,012 - ECD_03811 0.25 -0.9 4,024,013 + ECD_03811 0.25 +0.4 4,024,014 - ECD_03811 0.25 -0.5 4,024,097 + ECD_03811 0.31 -0.9 4,024,097 + ECD_03811 0.31 +0.2 4,024,098 - ECD_03811 0.31 +0.9 4,024,114 + ECD_03811 0.32 +0.9 4,024,114 + ECD_03811 0.32 +0.8 4,024,114 + ECD_03811 0.32 +0.9 4,024,115 - ECD_03811 0.32 +1.6 4,024,115 - ECD_03811 0.32 +1.4 4,024,115 - ECD_03811 0.32 +0.9 4,024,115 - ECD_03811 0.32 +2.0 4,024,243 + ECD_03811 0.40 +2.5 4,024,243 + ECD_03811 0.40 +0.7 4,024,244 - ECD_03811 0.40 +1.2 4,024,348 + ECD_03811 0.47 +1.1 4,024,349 - ECD_03811 0.47 -1.9 4,024,349 - ECD_03811 0.47 +1.4 4,024,460 + ECD_03811 0.55 +1.7 4,024,461 - ECD_03811 0.55 +2.1 4,024,471 + ECD_03811 0.55 +1.3 4,024,471 + ECD_03811 0.55 -0.3 4,024,472 - ECD_03811 0.55 +1.2 4,024,472 - ECD_03811 0.55 +1.6 4,024,473 + ECD_03811 0.55 +1.8 4,024,474 - ECD_03811 0.56 +1.3 4,024,474 - ECD_03811 0.56 -0.3
Or see this region's nucleotide sequence