Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03762 and ECD_03763 are separated by 24 nucleotides ECD_03763 and ECD_03764 are separated by 124 nucleotides
ECD_03762: ECD_03762 - putative 2,3-dihydroxypropane-1-sulfonate exporter, membrane protein, at 3,972,503 to 3,973,909
_03762
ECD_03763: ECD_03763 - putative sulfolipid alpha-glucosidase; alpha-glucosyl fluoride glucosidase, at 3,973,934 to 3,975,937
_03763
ECD_03764: ECD_03764 - putative sulfoquinovose mutarotase, at 3,976,062 to 3,976,988
_03764
Position (kb)
3973
3974
3975
3976 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3972.961 kb on - strand, within ECD_03762 at 3973.007 kb on + strand, within ECD_03762 at 3973.114 kb on + strand, within ECD_03762 at 3973.239 kb on + strand, within ECD_03762 at 3973.239 kb on + strand, within ECD_03762 at 3973.239 kb on + strand, within ECD_03762 at 3973.274 kb on - strand, within ECD_03762 at 3973.470 kb on + strand, within ECD_03762 at 3973.503 kb on + strand, within ECD_03762 at 3973.583 kb on + strand, within ECD_03762 at 3973.584 kb on - strand, within ECD_03762 at 3973.584 kb on - strand, within ECD_03762 at 3973.606 kb on - strand, within ECD_03762 at 3973.628 kb on - strand, within ECD_03762 at 3973.663 kb on + strand, within ECD_03762 at 3973.664 kb on - strand, within ECD_03762 at 3973.773 kb on + strand at 3973.801 kb on + strand at 3973.802 kb on - strand at 3973.819 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.935 kb on + strand at 3973.936 kb on - strand at 3973.936 kb on - strand at 3973.936 kb on - strand at 3973.946 kb on + strand at 3974.071 kb on + strand at 3974.072 kb on - strand at 3974.144 kb on + strand, within ECD_03763 at 3974.151 kb on + strand, within ECD_03763 at 3974.151 kb on + strand, within ECD_03763 at 3974.151 kb on + strand, within ECD_03763 at 3974.152 kb on - strand, within ECD_03763 at 3974.157 kb on + strand, within ECD_03763 at 3974.169 kb on + strand, within ECD_03763 at 3974.169 kb on + strand, within ECD_03763 at 3974.170 kb on - strand, within ECD_03763 at 3974.170 kb on - strand, within ECD_03763 at 3974.290 kb on + strand, within ECD_03763 at 3974.580 kb on + strand, within ECD_03763 at 3974.580 kb on + strand, within ECD_03763 at 3974.658 kb on + strand, within ECD_03763 at 3974.658 kb on + strand, within ECD_03763 at 3974.659 kb on - strand, within ECD_03763 at 3974.659 kb on - strand, within ECD_03763 at 3974.662 kb on + strand, within ECD_03763 at 3974.663 kb on - strand, within ECD_03763 at 3974.663 kb on - strand, within ECD_03763 at 3974.693 kb on - strand, within ECD_03763 at 3974.698 kb on + strand, within ECD_03763 at 3974.727 kb on + strand, within ECD_03763 at 3974.727 kb on + strand, within ECD_03763 at 3974.728 kb on - strand, within ECD_03763 at 3974.728 kb on - strand, within ECD_03763 at 3974.746 kb on - strand, within ECD_03763 at 3974.823 kb on + strand, within ECD_03763 at 3974.883 kb on + strand, within ECD_03763 at 3974.883 kb on + strand, within ECD_03763 at 3974.883 kb on + strand, within ECD_03763 at 3974.884 kb on - strand, within ECD_03763 at 3974.961 kb on + strand, within ECD_03763 at 3974.961 kb on + strand, within ECD_03763 at 3974.972 kb on - strand, within ECD_03763 at 3974.973 kb on + strand, within ECD_03763 at 3974.974 kb on - strand, within ECD_03763 at 3974.974 kb on - strand, within ECD_03763 at 3975.010 kb on + strand, within ECD_03763 at 3975.034 kb on - strand, within ECD_03763 at 3975.201 kb on - strand, within ECD_03763 at 3975.276 kb on + strand, within ECD_03763 at 3975.276 kb on + strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.277 kb on - strand, within ECD_03763 at 3975.366 kb on + strand, within ECD_03763 at 3975.366 kb on + strand, within ECD_03763 at 3975.393 kb on + strand, within ECD_03763 at 3975.393 kb on + strand, within ECD_03763 at 3975.393 kb on + strand, within ECD_03763 at 3975.394 kb on - strand, within ECD_03763 at 3975.394 kb on - strand, within ECD_03763 at 3975.394 kb on - strand, within ECD_03763 at 3975.415 kb on + strand, within ECD_03763 at 3975.415 kb on + strand, within ECD_03763 at 3975.439 kb on - strand, within ECD_03763 at 3975.439 kb on - strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.486 kb on + strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.487 kb on - strand, within ECD_03763 at 3975.558 kb on + strand, within ECD_03763 at 3975.583 kb on - strand, within ECD_03763 at 3975.583 kb on - strand, within ECD_03763 at 3975.587 kb on - strand, within ECD_03763 at 3975.622 kb on + strand, within ECD_03763 at 3975.651 kb on - strand, within ECD_03763 at 3975.688 kb on + strand, within ECD_03763 at 3975.731 kb on + strand, within ECD_03763 at 3975.732 kb on - strand, within ECD_03763 at 3975.789 kb on - strand at 3975.800 kb on - strand at 3975.998 kb on + strand at 3976.056 kb on + strand at 3976.122 kb on + strand at 3976.125 kb on + strand at 3976.167 kb on - strand, within ECD_03764 at 3976.414 kb on + strand, within ECD_03764 at 3976.445 kb on - strand, within ECD_03764 at 3976.445 kb on - strand, within ECD_03764 at 3976.461 kb on + strand, within ECD_03764 at 3976.461 kb on + strand, within ECD_03764 at 3976.462 kb on - strand, within ECD_03764 at 3976.478 kb on - strand, within ECD_03764 at 3976.607 kb on - strand, within ECD_03764 at 3976.650 kb on + strand, within ECD_03764 at 3976.709 kb on + strand, within ECD_03764 at 3976.709 kb on + strand, within ECD_03764 at 3976.709 kb on + strand, within ECD_03764 at 3976.710 kb on - strand, within ECD_03764 at 3976.710 kb on - strand, within ECD_03764 at 3976.710 kb on - strand, within ECD_03764 at 3976.732 kb on + strand, within ECD_03764 at 3976.733 kb on - strand, within ECD_03764 at 3976.842 kb on + strand, within ECD_03764 at 3976.843 kb on - strand, within ECD_03764
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 3,972,961 - ECD_03762 0.33 -0.4 3,973,007 + ECD_03762 0.36 -0.3 3,973,114 + ECD_03762 0.43 -0.0 3,973,239 + ECD_03762 0.52 -1.1 3,973,239 + ECD_03762 0.52 +0.2 3,973,239 + ECD_03762 0.52 -0.4 3,973,274 - ECD_03762 0.55 +0.2 3,973,470 + ECD_03762 0.69 +0.4 3,973,503 + ECD_03762 0.71 -0.4 3,973,583 + ECD_03762 0.77 +3.3 3,973,584 - ECD_03762 0.77 -0.4 3,973,584 - ECD_03762 0.77 -2.3 3,973,606 - ECD_03762 0.78 -0.3 3,973,628 - ECD_03762 0.80 -0.5 3,973,663 + ECD_03762 0.82 +1.5 3,973,664 - ECD_03762 0.83 +0.9 3,973,773 + -0.5 3,973,801 + +0.0 3,973,802 - +1.2 3,973,819 + +1.6 3,973,935 + -0.4 3,973,935 + -0.2 3,973,935 + +0.3 3,973,935 + -1.8 3,973,935 + -0.3 3,973,936 - -0.6 3,973,936 - +0.1 3,973,936 - -0.7 3,973,946 + +0.7 3,974,071 + +1.7 3,974,072 - -1.4 3,974,144 + ECD_03763 0.10 +0.3 3,974,151 + ECD_03763 0.11 -0.1 3,974,151 + ECD_03763 0.11 +0.7 3,974,151 + ECD_03763 0.11 -0.3 3,974,152 - ECD_03763 0.11 +1.0 3,974,157 + ECD_03763 0.11 +0.6 3,974,169 + ECD_03763 0.12 +0.3 3,974,169 + ECD_03763 0.12 -0.8 3,974,170 - ECD_03763 0.12 +0.5 3,974,170 - ECD_03763 0.12 +0.6 3,974,290 + ECD_03763 0.18 +0.4 3,974,580 + ECD_03763 0.32 -0.8 3,974,580 + ECD_03763 0.32 -1.3 3,974,658 + ECD_03763 0.36 -0.7 3,974,658 + ECD_03763 0.36 +0.8 3,974,659 - ECD_03763 0.36 -0.8 3,974,659 - ECD_03763 0.36 +2.0 3,974,662 + ECD_03763 0.36 -0.0 3,974,663 - ECD_03763 0.36 -1.0 3,974,663 - ECD_03763 0.36 +0.3 3,974,693 - ECD_03763 0.38 -2.2 3,974,698 + ECD_03763 0.38 -0.1 3,974,727 + ECD_03763 0.40 -0.1 3,974,727 + ECD_03763 0.40 -0.9 3,974,728 - ECD_03763 0.40 -1.4 3,974,728 - ECD_03763 0.40 -1.8 3,974,746 - ECD_03763 0.41 -1.4 3,974,823 + ECD_03763 0.44 -1.0 3,974,883 + ECD_03763 0.47 +0.1 3,974,883 + ECD_03763 0.47 -1.0 3,974,883 + ECD_03763 0.47 -0.8 3,974,884 - ECD_03763 0.47 +0.1 3,974,961 + ECD_03763 0.51 -0.8 3,974,961 + ECD_03763 0.51 +1.2 3,974,972 - ECD_03763 0.52 -0.1 3,974,973 + ECD_03763 0.52 +0.8 3,974,974 - ECD_03763 0.52 -2.3 3,974,974 - ECD_03763 0.52 +0.2 3,975,010 + ECD_03763 0.54 +0.6 3,975,034 - ECD_03763 0.55 +0.2 3,975,201 - ECD_03763 0.63 +0.2 3,975,276 + ECD_03763 0.67 -0.1 3,975,276 + ECD_03763 0.67 -0.9 3,975,277 - ECD_03763 0.67 -2.6 3,975,277 - ECD_03763 0.67 -0.2 3,975,277 - ECD_03763 0.67 +0.2 3,975,277 - ECD_03763 0.67 -0.4 3,975,277 - ECD_03763 0.67 +0.9 3,975,366 + ECD_03763 0.71 -1.2 3,975,366 + ECD_03763 0.71 +0.3 3,975,393 + ECD_03763 0.73 +0.1 3,975,393 + ECD_03763 0.73 -0.7 3,975,393 + ECD_03763 0.73 -0.6 3,975,394 - ECD_03763 0.73 +1.3 3,975,394 - ECD_03763 0.73 -0.6 3,975,394 - ECD_03763 0.73 +1.2 3,975,415 + ECD_03763 0.74 -3.8 3,975,415 + ECD_03763 0.74 -0.4 3,975,439 - ECD_03763 0.75 +2.0 3,975,439 - ECD_03763 0.75 -0.0 3,975,486 + ECD_03763 0.77 -0.1 3,975,486 + ECD_03763 0.77 -0.0 3,975,486 + ECD_03763 0.77 +0.4 3,975,486 + ECD_03763 0.77 +0.1 3,975,487 - ECD_03763 0.77 -0.4 3,975,487 - ECD_03763 0.77 -0.2 3,975,487 - ECD_03763 0.77 -2.3 3,975,487 - ECD_03763 0.77 -1.1 3,975,487 - ECD_03763 0.77 +0.3 3,975,487 - ECD_03763 0.77 +0.3 3,975,487 - ECD_03763 0.77 -0.8 3,975,558 + ECD_03763 0.81 +0.1 3,975,583 - ECD_03763 0.82 -1.2 3,975,583 - ECD_03763 0.82 -0.9 3,975,587 - ECD_03763 0.82 -0.1 3,975,622 + ECD_03763 0.84 -1.4 3,975,651 - ECD_03763 0.86 +0.6 3,975,688 + ECD_03763 0.88 -0.7 3,975,731 + ECD_03763 0.90 +0.6 3,975,732 - ECD_03763 0.90 -0.6 3,975,789 - -0.1 3,975,800 - +1.2 3,975,998 + +0.3 3,976,056 + -0.9 3,976,122 + +0.9 3,976,125 + +1.1 3,976,167 - ECD_03764 0.11 +0.7 3,976,414 + ECD_03764 0.38 -0.7 3,976,445 - ECD_03764 0.41 +0.3 3,976,445 - ECD_03764 0.41 +1.6 3,976,461 + ECD_03764 0.43 -0.9 3,976,461 + ECD_03764 0.43 -0.2 3,976,462 - ECD_03764 0.43 +1.5 3,976,478 - ECD_03764 0.45 +0.3 3,976,607 - ECD_03764 0.59 +2.2 3,976,650 + ECD_03764 0.63 +0.6 3,976,709 + ECD_03764 0.70 +1.1 3,976,709 + ECD_03764 0.70 +0.4 3,976,709 + ECD_03764 0.70 +0.2 3,976,710 - ECD_03764 0.70 -0.6 3,976,710 - ECD_03764 0.70 -2.2 3,976,710 - ECD_03764 0.70 +0.2 3,976,732 + ECD_03764 0.72 -0.9 3,976,733 - ECD_03764 0.72 +0.8 3,976,842 + ECD_03764 0.84 +0.8 3,976,843 - ECD_03764 0.84 +0.4
Or see this region's nucleotide sequence