Strain Fitness in Escherichia coli BL21 around ECD_03763

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03762 and ECD_03763 are separated by 24 nucleotidesECD_03763 and ECD_03764 are separated by 124 nucleotides ECD_03762: ECD_03762 - putative 2,3-dihydroxypropane-1-sulfonate exporter, membrane protein, at 3,972,503 to 3,973,909 _03762 ECD_03763: ECD_03763 - putative sulfolipid alpha-glucosidase; alpha-glucosyl fluoride glucosidase, at 3,973,934 to 3,975,937 _03763 ECD_03764: ECD_03764 - putative sulfoquinovose mutarotase, at 3,976,062 to 3,976,988 _03764 Position (kb) 3973 3974 3975 3976Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3972.961 kb on - strand, within ECD_03762at 3973.007 kb on + strand, within ECD_03762at 3973.114 kb on + strand, within ECD_03762at 3973.239 kb on + strand, within ECD_03762at 3973.239 kb on + strand, within ECD_03762at 3973.239 kb on + strand, within ECD_03762at 3973.274 kb on - strand, within ECD_03762at 3973.470 kb on + strand, within ECD_03762at 3973.503 kb on + strand, within ECD_03762at 3973.583 kb on + strand, within ECD_03762at 3973.584 kb on - strand, within ECD_03762at 3973.584 kb on - strand, within ECD_03762at 3973.606 kb on - strand, within ECD_03762at 3973.628 kb on - strand, within ECD_03762at 3973.663 kb on + strand, within ECD_03762at 3973.664 kb on - strand, within ECD_03762at 3973.773 kb on + strandat 3973.801 kb on + strandat 3973.802 kb on - strandat 3973.819 kb on + strandat 3973.935 kb on + strandat 3973.935 kb on + strandat 3973.935 kb on + strandat 3973.935 kb on + strandat 3973.935 kb on + strandat 3973.936 kb on - strandat 3973.936 kb on - strandat 3973.936 kb on - strandat 3973.946 kb on + strandat 3974.071 kb on + strandat 3974.072 kb on - strandat 3974.144 kb on + strand, within ECD_03763at 3974.151 kb on + strand, within ECD_03763at 3974.151 kb on + strand, within ECD_03763at 3974.151 kb on + strand, within ECD_03763at 3974.152 kb on - strand, within ECD_03763at 3974.157 kb on + strand, within ECD_03763at 3974.169 kb on + strand, within ECD_03763at 3974.169 kb on + strand, within ECD_03763at 3974.170 kb on - strand, within ECD_03763at 3974.170 kb on - strand, within ECD_03763at 3974.290 kb on + strand, within ECD_03763at 3974.580 kb on + strand, within ECD_03763at 3974.580 kb on + strand, within ECD_03763at 3974.658 kb on + strand, within ECD_03763at 3974.658 kb on + strand, within ECD_03763at 3974.659 kb on - strand, within ECD_03763at 3974.659 kb on - strand, within ECD_03763at 3974.662 kb on + strand, within ECD_03763at 3974.663 kb on - strand, within ECD_03763at 3974.663 kb on - strand, within ECD_03763at 3974.693 kb on - strand, within ECD_03763at 3974.698 kb on + strand, within ECD_03763at 3974.727 kb on + strand, within ECD_03763at 3974.727 kb on + strand, within ECD_03763at 3974.728 kb on - strand, within ECD_03763at 3974.728 kb on - strand, within ECD_03763at 3974.746 kb on - strand, within ECD_03763at 3974.823 kb on + strand, within ECD_03763at 3974.883 kb on + strand, within ECD_03763at 3974.883 kb on + strand, within ECD_03763at 3974.883 kb on + strand, within ECD_03763at 3974.884 kb on - strand, within ECD_03763at 3974.961 kb on + strand, within ECD_03763at 3974.961 kb on + strand, within ECD_03763at 3974.972 kb on - strand, within ECD_03763at 3974.973 kb on + strand, within ECD_03763at 3974.974 kb on - strand, within ECD_03763at 3974.974 kb on - strand, within ECD_03763at 3975.010 kb on + strand, within ECD_03763at 3975.034 kb on - strand, within ECD_03763at 3975.201 kb on - strand, within ECD_03763at 3975.276 kb on + strand, within ECD_03763at 3975.276 kb on + strand, within ECD_03763at 3975.277 kb on - strand, within ECD_03763at 3975.277 kb on - strand, within ECD_03763at 3975.277 kb on - strand, within ECD_03763at 3975.277 kb on - strand, within ECD_03763at 3975.277 kb on - strand, within ECD_03763at 3975.366 kb on + strand, within ECD_03763at 3975.366 kb on + strand, within ECD_03763at 3975.393 kb on + strand, within ECD_03763at 3975.393 kb on + strand, within ECD_03763at 3975.393 kb on + strand, within ECD_03763at 3975.394 kb on - strand, within ECD_03763at 3975.394 kb on - strand, within ECD_03763at 3975.394 kb on - strand, within ECD_03763at 3975.415 kb on + strand, within ECD_03763at 3975.415 kb on + strand, within ECD_03763at 3975.439 kb on - strand, within ECD_03763at 3975.439 kb on - strand, within ECD_03763at 3975.486 kb on + strand, within ECD_03763at 3975.486 kb on + strand, within ECD_03763at 3975.486 kb on + strand, within ECD_03763at 3975.486 kb on + strand, within ECD_03763at 3975.487 kb on - strand, within ECD_03763at 3975.487 kb on - strand, within ECD_03763at 3975.487 kb on - strand, within ECD_03763at 3975.487 kb on - strand, within ECD_03763at 3975.487 kb on - strand, within ECD_03763at 3975.487 kb on - strand, within ECD_03763at 3975.487 kb on - strand, within ECD_03763at 3975.558 kb on + strand, within ECD_03763at 3975.583 kb on - strand, within ECD_03763at 3975.583 kb on - strand, within ECD_03763at 3975.587 kb on - strand, within ECD_03763at 3975.622 kb on + strand, within ECD_03763at 3975.651 kb on - strand, within ECD_03763at 3975.688 kb on + strand, within ECD_03763at 3975.731 kb on + strand, within ECD_03763at 3975.732 kb on - strand, within ECD_03763at 3975.789 kb on - strandat 3975.800 kb on - strandat 3975.998 kb on + strandat 3976.056 kb on + strandat 3976.122 kb on + strandat 3976.125 kb on + strandat 3976.167 kb on - strand, within ECD_03764at 3976.414 kb on + strand, within ECD_03764at 3976.445 kb on - strand, within ECD_03764at 3976.445 kb on - strand, within ECD_03764at 3976.461 kb on + strand, within ECD_03764at 3976.461 kb on + strand, within ECD_03764at 3976.462 kb on - strand, within ECD_03764at 3976.478 kb on - strand, within ECD_03764at 3976.607 kb on - strand, within ECD_03764at 3976.650 kb on + strand, within ECD_03764at 3976.709 kb on + strand, within ECD_03764at 3976.709 kb on + strand, within ECD_03764at 3976.709 kb on + strand, within ECD_03764at 3976.710 kb on - strand, within ECD_03764at 3976.710 kb on - strand, within ECD_03764at 3976.710 kb on - strand, within ECD_03764at 3976.732 kb on + strand, within ECD_03764at 3976.733 kb on - strand, within ECD_03764at 3976.842 kb on + strand, within ECD_03764at 3976.843 kb on - strand, within ECD_03764

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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3,972,961 - ECD_03762 0.33 -0.4
3,973,007 + ECD_03762 0.36 -0.3
3,973,114 + ECD_03762 0.43 -0.0
3,973,239 + ECD_03762 0.52 -1.1
3,973,239 + ECD_03762 0.52 +0.2
3,973,239 + ECD_03762 0.52 -0.4
3,973,274 - ECD_03762 0.55 +0.2
3,973,470 + ECD_03762 0.69 +0.4
3,973,503 + ECD_03762 0.71 -0.4
3,973,583 + ECD_03762 0.77 +3.3
3,973,584 - ECD_03762 0.77 -0.4
3,973,584 - ECD_03762 0.77 -2.3
3,973,606 - ECD_03762 0.78 -0.3
3,973,628 - ECD_03762 0.80 -0.5
3,973,663 + ECD_03762 0.82 +1.5
3,973,664 - ECD_03762 0.83 +0.9
3,973,773 + -0.5
3,973,801 + +0.0
3,973,802 - +1.2
3,973,819 + +1.6
3,973,935 + -0.4
3,973,935 + -0.2
3,973,935 + +0.3
3,973,935 + -1.8
3,973,935 + -0.3
3,973,936 - -0.6
3,973,936 - +0.1
3,973,936 - -0.7
3,973,946 + +0.7
3,974,071 + +1.7
3,974,072 - -1.4
3,974,144 + ECD_03763 0.10 +0.3
3,974,151 + ECD_03763 0.11 -0.1
3,974,151 + ECD_03763 0.11 +0.7
3,974,151 + ECD_03763 0.11 -0.3
3,974,152 - ECD_03763 0.11 +1.0
3,974,157 + ECD_03763 0.11 +0.6
3,974,169 + ECD_03763 0.12 +0.3
3,974,169 + ECD_03763 0.12 -0.8
3,974,170 - ECD_03763 0.12 +0.5
3,974,170 - ECD_03763 0.12 +0.6
3,974,290 + ECD_03763 0.18 +0.4
3,974,580 + ECD_03763 0.32 -0.8
3,974,580 + ECD_03763 0.32 -1.3
3,974,658 + ECD_03763 0.36 -0.7
3,974,658 + ECD_03763 0.36 +0.8
3,974,659 - ECD_03763 0.36 -0.8
3,974,659 - ECD_03763 0.36 +2.0
3,974,662 + ECD_03763 0.36 -0.0
3,974,663 - ECD_03763 0.36 -1.0
3,974,663 - ECD_03763 0.36 +0.3
3,974,693 - ECD_03763 0.38 -2.2
3,974,698 + ECD_03763 0.38 -0.1
3,974,727 + ECD_03763 0.40 -0.1
3,974,727 + ECD_03763 0.40 -0.9
3,974,728 - ECD_03763 0.40 -1.4
3,974,728 - ECD_03763 0.40 -1.8
3,974,746 - ECD_03763 0.41 -1.4
3,974,823 + ECD_03763 0.44 -1.0
3,974,883 + ECD_03763 0.47 +0.1
3,974,883 + ECD_03763 0.47 -1.0
3,974,883 + ECD_03763 0.47 -0.8
3,974,884 - ECD_03763 0.47 +0.1
3,974,961 + ECD_03763 0.51 -0.8
3,974,961 + ECD_03763 0.51 +1.2
3,974,972 - ECD_03763 0.52 -0.1
3,974,973 + ECD_03763 0.52 +0.8
3,974,974 - ECD_03763 0.52 -2.3
3,974,974 - ECD_03763 0.52 +0.2
3,975,010 + ECD_03763 0.54 +0.6
3,975,034 - ECD_03763 0.55 +0.2
3,975,201 - ECD_03763 0.63 +0.2
3,975,276 + ECD_03763 0.67 -0.1
3,975,276 + ECD_03763 0.67 -0.9
3,975,277 - ECD_03763 0.67 -2.6
3,975,277 - ECD_03763 0.67 -0.2
3,975,277 - ECD_03763 0.67 +0.2
3,975,277 - ECD_03763 0.67 -0.4
3,975,277 - ECD_03763 0.67 +0.9
3,975,366 + ECD_03763 0.71 -1.2
3,975,366 + ECD_03763 0.71 +0.3
3,975,393 + ECD_03763 0.73 +0.1
3,975,393 + ECD_03763 0.73 -0.7
3,975,393 + ECD_03763 0.73 -0.6
3,975,394 - ECD_03763 0.73 +1.3
3,975,394 - ECD_03763 0.73 -0.6
3,975,394 - ECD_03763 0.73 +1.2
3,975,415 + ECD_03763 0.74 -3.8
3,975,415 + ECD_03763 0.74 -0.4
3,975,439 - ECD_03763 0.75 +2.0
3,975,439 - ECD_03763 0.75 -0.0
3,975,486 + ECD_03763 0.77 -0.1
3,975,486 + ECD_03763 0.77 -0.0
3,975,486 + ECD_03763 0.77 +0.4
3,975,486 + ECD_03763 0.77 +0.1
3,975,487 - ECD_03763 0.77 -0.4
3,975,487 - ECD_03763 0.77 -0.2
3,975,487 - ECD_03763 0.77 -2.3
3,975,487 - ECD_03763 0.77 -1.1
3,975,487 - ECD_03763 0.77 +0.3
3,975,487 - ECD_03763 0.77 +0.3
3,975,487 - ECD_03763 0.77 -0.8
3,975,558 + ECD_03763 0.81 +0.1
3,975,583 - ECD_03763 0.82 -1.2
3,975,583 - ECD_03763 0.82 -0.9
3,975,587 - ECD_03763 0.82 -0.1
3,975,622 + ECD_03763 0.84 -1.4
3,975,651 - ECD_03763 0.86 +0.6
3,975,688 + ECD_03763 0.88 -0.7
3,975,731 + ECD_03763 0.90 +0.6
3,975,732 - ECD_03763 0.90 -0.6
3,975,789 - -0.1
3,975,800 - +1.2
3,975,998 + +0.3
3,976,056 + -0.9
3,976,122 + +0.9
3,976,125 + +1.1
3,976,167 - ECD_03764 0.11 +0.7
3,976,414 + ECD_03764 0.38 -0.7
3,976,445 - ECD_03764 0.41 +0.3
3,976,445 - ECD_03764 0.41 +1.6
3,976,461 + ECD_03764 0.43 -0.9
3,976,461 + ECD_03764 0.43 -0.2
3,976,462 - ECD_03764 0.43 +1.5
3,976,478 - ECD_03764 0.45 +0.3
3,976,607 - ECD_03764 0.59 +2.2
3,976,650 + ECD_03764 0.63 +0.6
3,976,709 + ECD_03764 0.70 +1.1
3,976,709 + ECD_03764 0.70 +0.4
3,976,709 + ECD_03764 0.70 +0.2
3,976,710 - ECD_03764 0.70 -0.6
3,976,710 - ECD_03764 0.70 -2.2
3,976,710 - ECD_03764 0.70 +0.2
3,976,732 + ECD_03764 0.72 -0.9
3,976,733 - ECD_03764 0.72 +0.8
3,976,842 + ECD_03764 0.84 +0.8
3,976,843 - ECD_03764 0.84 +0.4

Or see this region's nucleotide sequence