Strain Fitness in Escherichia coli BL21 around ECD_03365

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03364 and ECD_03365 are separated by 369 nucleotidesECD_03365 and ECD_03366 are separated by 210 nucleotides ECD_03364: ECD_03364 - acid resistance regulon transcriptional activator; autoactivator, at 3,526,173 to 3,526,997 _03364 ECD_03365: ECD_03365 - glutamate decarboxylase A, PLP-dependent, at 3,527,367 to 3,528,767 _03365 ECD_03366: ECD_03366 - putative cytochrome C peroxidase, at 3,528,978 to 3,530,375 _03366 Position (kb) 3527 3528 3529Strain fitness (log2 ratio) -2 -1 0 1at 3526.441 kb on + strand, within ECD_03364at 3526.442 kb on - strand, within ECD_03364at 3526.536 kb on - strand, within ECD_03364at 3526.539 kb on - strand, within ECD_03364at 3526.605 kb on - strand, within ECD_03364at 3526.863 kb on - strand, within ECD_03364at 3527.145 kb on - strandat 3527.287 kb on + strandat 3527.291 kb on - strandat 3527.302 kb on + strandat 3527.360 kb on + strandat 3527.360 kb on + strandat 3528.616 kb on + strand, within ECD_03365at 3528.996 kb on - strandat 3528.997 kb on + strandat 3529.041 kb on - strandat 3529.082 kb on - strandat 3529.139 kb on - strand, within ECD_03366at 3529.160 kb on + strand, within ECD_03366at 3529.160 kb on + strand, within ECD_03366at 3529.160 kb on + strand, within ECD_03366at 3529.164 kb on + strand, within ECD_03366at 3529.422 kb on - strand, within ECD_03366at 3529.532 kb on + strand, within ECD_03366at 3529.648 kb on - strand, within ECD_03366at 3529.655 kb on + strand, within ECD_03366at 3529.656 kb on - strand, within ECD_03366at 3529.656 kb on - strand, within ECD_03366at 3529.656 kb on - strand, within ECD_03366at 3529.659 kb on + strand, within ECD_03366

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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3,526,441 + ECD_03364 0.32 -1.1
3,526,442 - ECD_03364 0.33 -1.6
3,526,536 - ECD_03364 0.44 -0.8
3,526,539 - ECD_03364 0.44 -0.3
3,526,605 - ECD_03364 0.52 -0.3
3,526,863 - ECD_03364 0.84 -2.4
3,527,145 - +0.3
3,527,287 + +0.0
3,527,291 - +0.2
3,527,302 + -0.9
3,527,360 + -0.3
3,527,360 + -0.6
3,528,616 + ECD_03365 0.89 -1.2
3,528,996 - -0.8
3,528,997 + +0.4
3,529,041 - -0.3
3,529,082 - -0.6
3,529,139 - ECD_03366 0.12 +0.4
3,529,160 + ECD_03366 0.13 -0.9
3,529,160 + ECD_03366 0.13 +1.3
3,529,160 + ECD_03366 0.13 +0.1
3,529,164 + ECD_03366 0.13 +0.1
3,529,422 - ECD_03366 0.32 +0.8
3,529,532 + ECD_03366 0.40 -1.5
3,529,648 - ECD_03366 0.48 +0.3
3,529,655 + ECD_03366 0.48 -0.3
3,529,656 - ECD_03366 0.48 +0.1
3,529,656 - ECD_03366 0.48 -1.0
3,529,656 - ECD_03366 0.48 -1.3
3,529,659 + ECD_03366 0.49 -0.0

Or see this region's nucleotide sequence