Experiment: EV116
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02425 and ECD_02426 are separated by 144 nucleotides ECD_02426 and ECD_02427 are separated by 190 nucleotides
ECD_02425: ECD_02425 - inositol monophosphatase, at 2,529,247 to 2,530,050
_02425
ECD_02426: ECD_02426 - putative S9 family prolyl oligopeptidase, at 2,530,195 to 2,531,049
_02426
ECD_02427: ECD_02427 - stationary phase inducible protein, at 2,531,240 to 2,532,520
_02427
Position (kb)
2530
2531
2532 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2530.028 kb on + strand at 2530.125 kb on - strand at 2530.125 kb on - strand at 2530.265 kb on - strand at 2530.265 kb on - strand at 2530.297 kb on + strand, within ECD_02426 at 2530.298 kb on - strand, within ECD_02426 at 2530.465 kb on - strand, within ECD_02426 at 2530.628 kb on + strand, within ECD_02426 at 2530.628 kb on + strand, within ECD_02426 at 2530.629 kb on - strand, within ECD_02426 at 2530.715 kb on + strand, within ECD_02426 at 2530.715 kb on + strand, within ECD_02426 at 2530.751 kb on - strand, within ECD_02426 at 2530.751 kb on - strand, within ECD_02426 at 2530.793 kb on + strand, within ECD_02426 at 2530.794 kb on - strand, within ECD_02426 at 2530.943 kb on + strand, within ECD_02426 at 2531.025 kb on + strand at 2531.048 kb on - strand at 2531.101 kb on - strand at 2531.167 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.218 kb on + strand at 2531.235 kb on + strand at 2531.248 kb on + strand at 2531.356 kb on + strand at 2531.375 kb on - strand, within ECD_02427 at 2531.390 kb on - strand, within ECD_02427 at 2531.610 kb on - strand, within ECD_02427 at 2531.625 kb on + strand, within ECD_02427 at 2531.626 kb on - strand, within ECD_02427 at 2531.626 kb on - strand, within ECD_02427 at 2531.702 kb on + strand, within ECD_02427 at 2531.711 kb on + strand, within ECD_02427 at 2532.015 kb on + strand, within ECD_02427 at 2532.029 kb on + strand, within ECD_02427 at 2532.029 kb on + strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427 at 2532.030 kb on - strand, within ECD_02427
Per-strain Table
Position Strand Gene LocusTag Fraction EV116 remove 2,530,028 + +0.1 2,530,125 - +1.5 2,530,125 - +1.3 2,530,265 - +0.4 2,530,265 - +0.5 2,530,297 + ECD_02426 0.12 +0.5 2,530,298 - ECD_02426 0.12 -0.1 2,530,465 - ECD_02426 0.32 +0.3 2,530,628 + ECD_02426 0.51 +0.3 2,530,628 + ECD_02426 0.51 +0.9 2,530,629 - ECD_02426 0.51 -1.5 2,530,715 + ECD_02426 0.61 -0.9 2,530,715 + ECD_02426 0.61 -0.2 2,530,751 - ECD_02426 0.65 +0.3 2,530,751 - ECD_02426 0.65 -0.2 2,530,793 + ECD_02426 0.70 -1.2 2,530,794 - ECD_02426 0.70 +0.5 2,530,943 + ECD_02426 0.87 -1.0 2,531,025 + +0.6 2,531,048 - -1.0 2,531,101 - +0.8 2,531,167 + +0.4 2,531,218 + -0.6 2,531,218 + -0.6 2,531,218 + +1.0 2,531,218 + -0.1 2,531,218 + -2.2 2,531,235 + -0.2 2,531,248 + +0.6 2,531,356 + -1.1 2,531,375 - ECD_02427 0.11 +2.1 2,531,390 - ECD_02427 0.12 +0.6 2,531,610 - ECD_02427 0.29 +0.5 2,531,625 + ECD_02427 0.30 +0.9 2,531,626 - ECD_02427 0.30 +0.2 2,531,626 - ECD_02427 0.30 -0.9 2,531,702 + ECD_02427 0.36 -0.9 2,531,711 + ECD_02427 0.37 -0.8 2,532,015 + ECD_02427 0.60 -0.5 2,532,029 + ECD_02427 0.62 -0.8 2,532,029 + ECD_02427 0.62 +0.4 2,532,030 - ECD_02427 0.62 +1.7 2,532,030 - ECD_02427 0.62 -1.1 2,532,030 - ECD_02427 0.62 -1.1 2,532,030 - ECD_02427 0.62 -0.0
Or see this region's nucleotide sequence