Strain Fitness in Escherichia coli BL21 around ECD_02426

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02425 and ECD_02426 are separated by 144 nucleotidesECD_02426 and ECD_02427 are separated by 190 nucleotides ECD_02425: ECD_02425 - inositol monophosphatase, at 2,529,247 to 2,530,050 _02425 ECD_02426: ECD_02426 - putative S9 family prolyl oligopeptidase, at 2,530,195 to 2,531,049 _02426 ECD_02427: ECD_02427 - stationary phase inducible protein, at 2,531,240 to 2,532,520 _02427 Position (kb) 2530 2531 2532Strain fitness (log2 ratio) -2 -1 0 1 2at 2530.028 kb on + strandat 2530.125 kb on - strandat 2530.125 kb on - strandat 2530.265 kb on - strandat 2530.265 kb on - strandat 2530.297 kb on + strand, within ECD_02426at 2530.298 kb on - strand, within ECD_02426at 2530.465 kb on - strand, within ECD_02426at 2530.628 kb on + strand, within ECD_02426at 2530.628 kb on + strand, within ECD_02426at 2530.629 kb on - strand, within ECD_02426at 2530.715 kb on + strand, within ECD_02426at 2530.715 kb on + strand, within ECD_02426at 2530.751 kb on - strand, within ECD_02426at 2530.751 kb on - strand, within ECD_02426at 2530.793 kb on + strand, within ECD_02426at 2530.794 kb on - strand, within ECD_02426at 2530.943 kb on + strand, within ECD_02426at 2531.025 kb on + strandat 2531.048 kb on - strandat 2531.101 kb on - strandat 2531.167 kb on + strandat 2531.218 kb on + strandat 2531.218 kb on + strandat 2531.218 kb on + strandat 2531.218 kb on + strandat 2531.218 kb on + strandat 2531.235 kb on + strandat 2531.248 kb on + strandat 2531.356 kb on + strandat 2531.375 kb on - strand, within ECD_02427at 2531.390 kb on - strand, within ECD_02427at 2531.610 kb on - strand, within ECD_02427at 2531.625 kb on + strand, within ECD_02427at 2531.626 kb on - strand, within ECD_02427at 2531.626 kb on - strand, within ECD_02427at 2531.702 kb on + strand, within ECD_02427at 2531.711 kb on + strand, within ECD_02427at 2532.015 kb on + strand, within ECD_02427at 2532.029 kb on + strand, within ECD_02427at 2532.029 kb on + strand, within ECD_02427at 2532.030 kb on - strand, within ECD_02427at 2532.030 kb on - strand, within ECD_02427at 2532.030 kb on - strand, within ECD_02427at 2532.030 kb on - strand, within ECD_02427

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,530,028 + +0.1
2,530,125 - +1.5
2,530,125 - +1.3
2,530,265 - +0.4
2,530,265 - +0.5
2,530,297 + ECD_02426 0.12 +0.5
2,530,298 - ECD_02426 0.12 -0.1
2,530,465 - ECD_02426 0.32 +0.3
2,530,628 + ECD_02426 0.51 +0.3
2,530,628 + ECD_02426 0.51 +0.9
2,530,629 - ECD_02426 0.51 -1.5
2,530,715 + ECD_02426 0.61 -0.9
2,530,715 + ECD_02426 0.61 -0.2
2,530,751 - ECD_02426 0.65 +0.3
2,530,751 - ECD_02426 0.65 -0.2
2,530,793 + ECD_02426 0.70 -1.2
2,530,794 - ECD_02426 0.70 +0.5
2,530,943 + ECD_02426 0.87 -1.0
2,531,025 + +0.6
2,531,048 - -1.0
2,531,101 - +0.8
2,531,167 + +0.4
2,531,218 + -0.6
2,531,218 + -0.6
2,531,218 + +1.0
2,531,218 + -0.1
2,531,218 + -2.2
2,531,235 + -0.2
2,531,248 + +0.6
2,531,356 + -1.1
2,531,375 - ECD_02427 0.11 +2.1
2,531,390 - ECD_02427 0.12 +0.6
2,531,610 - ECD_02427 0.29 +0.5
2,531,625 + ECD_02427 0.30 +0.9
2,531,626 - ECD_02427 0.30 +0.2
2,531,626 - ECD_02427 0.30 -0.9
2,531,702 + ECD_02427 0.36 -0.9
2,531,711 + ECD_02427 0.37 -0.8
2,532,015 + ECD_02427 0.60 -0.5
2,532,029 + ECD_02427 0.62 -0.8
2,532,029 + ECD_02427 0.62 +0.4
2,532,030 - ECD_02427 0.62 +1.7
2,532,030 - ECD_02427 0.62 -1.1
2,532,030 - ECD_02427 0.62 -1.1
2,532,030 - ECD_02427 0.62 -0.0

Or see this region's nucleotide sequence