Strain Fitness in Escherichia coli BL21 around ECD_02369

Experiment: EV116

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02368 and ECD_02369 are separated by 212 nucleotidesECD_02369 and ECD_02370 are separated by 16 nucleotides ECD_02368: ECD_02368 - phosphoribosylaminoimidazole-succinocarboxamide synthetase, at 2,461,394 to 2,462,107 _02368 ECD_02369: ECD_02369 - BamABCDE complex OM biogenesis lipoprotein, at 2,462,320 to 2,463,354 _02369 ECD_02370: ECD_02370 - dihydrodipicolinate synthase, at 2,463,371 to 2,464,249 _02370 Position (kb) 2462 2463 2464Strain fitness (log2 ratio) -2 -1 0 1 2at 2461.335 kb on + strandat 2461.335 kb on + strandat 2461.335 kb on + strandat 2461.407 kb on - strandat 2461.944 kb on + strand, within ECD_02368at 2462.078 kb on - strandat 2462.085 kb on + strandat 2462.086 kb on - strandat 2462.131 kb on + strandat 2462.315 kb on + strandat 2462.351 kb on - strandat 2462.448 kb on - strand, within ECD_02369at 2462.516 kb on + strand, within ECD_02369at 2462.516 kb on + strand, within ECD_02369at 2462.517 kb on - strand, within ECD_02369at 2462.743 kb on - strand, within ECD_02369at 2462.743 kb on - strand, within ECD_02369at 2462.970 kb on - strand, within ECD_02369at 2463.013 kb on - strand, within ECD_02369at 2463.234 kb on - strand, within ECD_02369at 2463.262 kb on - strandat 2463.264 kb on - strandat 2463.280 kb on - strandat 2463.348 kb on - strandat 2463.348 kb on - strandat 2463.372 kb on + strandat 2464.335 kb on + strandat 2464.335 kb on + strandat 2464.336 kb on - strandat 2464.336 kb on - strandat 2464.336 kb on - strandat 2464.336 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction EV116
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2,461,335 + -1.0
2,461,335 + +0.4
2,461,335 + -0.8
2,461,407 - -0.5
2,461,944 + ECD_02368 0.77 -1.0
2,462,078 - -0.1
2,462,085 + -0.5
2,462,086 - +0.7
2,462,131 + -1.0
2,462,315 + +0.8
2,462,351 - +0.5
2,462,448 - ECD_02369 0.12 -0.7
2,462,516 + ECD_02369 0.19 +2.4
2,462,516 + ECD_02369 0.19 -0.5
2,462,517 - ECD_02369 0.19 +0.8
2,462,743 - ECD_02369 0.41 +0.3
2,462,743 - ECD_02369 0.41 +1.3
2,462,970 - ECD_02369 0.63 +0.8
2,463,013 - ECD_02369 0.67 +0.7
2,463,234 - ECD_02369 0.88 +0.9
2,463,262 - -0.2
2,463,264 - -0.7
2,463,280 - +0.1
2,463,348 - -0.4
2,463,348 - +0.2
2,463,372 + +0.4
2,464,335 + -1.8
2,464,335 + +0.2
2,464,336 - +0.1
2,464,336 - -0.6
2,464,336 - -1.1
2,464,336 - -0.3

Or see this region's nucleotide sequence